RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 A0A1B0GU33 70 aa1.1□□□□□ -2.23
SNRNP40-207ENST00000491106 A8MUU9 505 aa1.1□□□□□ -2.23
SNRNP40-207ENST00000491106 K7ERS5 55 aa1.1□□□□□ -2.23
SNRNP40-207ENST00000491106 LCE3DQ9BYE3 92 aa1.1□□□□□ -2.23
SNRNP40-207ENST00000491106 DNAH1Q9P2D7 4330 aa1.09□□□□□ -2.23
SNRNP40-207ENST00000491106 LINC00304Q8N9R0 145 aa1.09□□□□□ -2.23
SNRNP40-207ENST00000491106 C20orf166-AS1Q96NR2 134 aa1.09□□□□□ -2.23
SNRNP40-207ENST00000491106 COL7A1Q02388 2944 aa1.09□□□□□ -2.23
SNRNP40-207ENST00000491106 DNAH9Q9NYC9 4486 aa1.09□□□□□ -2.24
SNRNP40-207ENST00000491106 STAB1Q9NY15 2570 aa1.08□□□□□ -2.24
SNRNP40-207ENST00000491106 HUWE1Q7Z6Z7 4374 aaKnown RBP1.08□□□□□ -2.24
SNRNP40-207ENST00000491106 COL6A5A8TX70 2615 aa1.08□□□□□ -2.24
SNRNP40-207ENST00000491106 BAHCC1Q9P281 2608 aa1.08□□□□□ -2.24
SNRNP40-207ENST00000491106 TRRAPQ9Y4A5 3859 aa1.08□□□□□ -2.24
SNRNP40-207ENST00000491106 H1FX-AS1Q4G0G2 97 aa1.08□□□□□ -2.24
SNRNP40-207ENST00000491106 CSAG1Q6PB30 78 aa1.08□□□□□ -2.24
SNRNP40-207ENST00000491106 COX6B2Q6YFQ2 88 aa1.08□□□□□ -2.24
SNRNP40-207ENST00000491106 ADM2Q7Z4H4 148 aa1.07□□□□□ -2.24
SNRNP40-207ENST00000491106 NBEAL1Q6ZS30 2694 aa1.06□□□□□ -2.24
SNRNP40-207ENST00000491106 CMYA5Q8N3K9 4069 aa1.06□□□□□ -2.24
SNRNP40-207ENST00000491106 FBN3Q75N90 2809 aa1.06□□□□□ -2.24
SNRNP40-207ENST00000491106 KRTAP25-1Q3LHN0 102 aa1.06□□□□□ -2.24
SNRNP40-207ENST00000491106 DNAH3Q8TD57 4116 aa1.06□□□□□ -2.24
SNRNP40-207ENST00000491106 MEGF8Q7Z7M0 2845 aa1.06□□□□□ -2.24
SNRNP40-207ENST00000491106 DYNC2H1Q8NCM8 4307 aaKnown RBP1.06□□□□□ -2.24
SNRNP40-207ENST00000491106 VPS13DQ5THJ4 4388 aa1.05□□□□□ -2.24
SNRNP40-207ENST00000491106 DNAH8Q96JB1 4490 aa1.05□□□□□ -2.24
SNRNP40-207ENST00000491106 H0YAA0 97 aa1.05□□□□□ -2.24
SNRNP40-207ENST00000491106 ROMO1P60602 79 aa1.05□□□□□ -2.24
SNRNP40-207ENST00000491106 RPL37P61927 97 aaKnown RBP1.05□□□□□ -2.24
SNRNP40-207ENST00000491106 TGP01266 2768 aa1.05□□□□□ -2.24
SNRNP40-207ENST00000491106 ANK2Q01484 3957 aa1.05□□□□□ -2.24
SNRNP40-207ENST00000491106 NOTCH1P46531 2555 aa1.04□□□□□ -2.24
SNRNP40-207ENST00000491106 C9orf92A6NGG3 77 aa1.04□□□□□ -2.24
SNRNP40-207ENST00000491106 SMR3BP02814 79 aaPredicted RBP1.04□□□□□ -2.24
SNRNP40-207ENST00000491106 KRTAP21-3Q3LHN1 58 aa1.04□□□□□ -2.24
SNRNP40-207ENST00000491106 CRIPTQ9P021 101 aa1.04□□□□□ -2.24
SNRNP40-207ENST00000491106 DNAH10Q8IVF4 4471 aa1.04□□□□□ -2.24
SNRNP40-207ENST00000491106 MGAM2Q2M2H8 2515 aa1.04□□□□□ -2.24
SNRNP40-207ENST00000491106 DNAH17Q9UFH2 4485 aa1.03□□□□□ -2.24
SNRNP40-207ENST00000491106 M0QZ58 72 aa1.03□□□□□ -2.24
SNRNP40-207ENST00000491106 STAB2Q8WWQ8 2551 aa1.02□□□□□ -2.25
SNRNP40-207ENST00000491106 DNAH2Q9P225 4427 aa1.02□□□□□ -2.25
SNRNP40-207ENST00000491106 KRTAP10-4P60372 401 aaPredicted RBP1.02□□□□□ -2.25
SNRNP40-207ENST00000491106 DNAH7Q8WXX0 4024 aa1.01□□□□□ -2.25
SNRNP40-207ENST00000491106 PRKDCP78527 4128 aaKnown RBP1.01□□□□□ -2.25
SNRNP40-207ENST00000491106 S4R3F8 94 aa1.01□□□□□ -2.25
SNRNP40-207ENST00000491106 FLG2Q5D862 2391 aaPredicted RBP1.01□□□□□ -2.25
SNRNP40-207ENST00000491106 FRAS1Q86XX4 4008 aa1.01□□□□□ -2.25
SNRNP40-207ENST00000491106 LYSTQ99698 3801 aa1.01□□□□□ -2.25
SNRNP40-207ENST00000491106 CSMD3Q7Z407 3707 aa1.01□□□□□ -2.25
SNRNP40-207ENST00000491106 DNAH11Q96DT5 4516 aa1.01□□□□□ -2.25
SNRNP40-207ENST00000491106 KRTAP5-8O75690 187 aa1□□□□□ -2.25
SNRNP40-207ENST00000491106 SPINT4Q6UDR6 99 aa1□□□□□ -2.25
SNRNP40-207ENST00000491106 PKD1P98161 4303 aa1□□□□□ -2.25
SNRNP40-207ENST00000491106 HECTD4Q9Y4D8 3996 aa0.99□□□□□ -2.25
SNRNP40-207ENST00000491106 KRTAP10-10P60014 251 aa0.99□□□□□ -2.25
SNRNP40-207ENST00000491106 TPRXLQ17RH7 258 aa0.99□□□□□ -2.25
SNRNP40-207ENST00000491106 PLECQ15149 4684 aaKnown RBP0.98□□□□□ -2.25
SNRNP40-207ENST00000491106 A0A0D9SG42 100 aa0.98□□□□□ -2.25
SNRNP40-207ENST00000491106 P0C880 135 aa0.98□□□□□ -2.25
SNRNP40-207ENST00000491106 KRTAP12-1P59990 96 aa0.98□□□□□ -2.25
SNRNP40-207ENST00000491106 LRP1BQ9NZR2 4599 aa0.97□□□□□ -2.25
SNRNP40-207ENST00000491106 KRTAP13-4Q3LI77 160 aa0.97□□□□□ -2.25
SNRNP40-207ENST00000491106 KMT2AQ03164 3969 aa0.97□□□□□ -2.25
SNRNP40-207ENST00000491106 DNAH6Q9C0G6 4158 aa0.97□□□□□ -2.25
SNRNP40-207ENST00000491106 DMBT1Q9UGM3 2413 aaPredicted RBP0.97□□□□□ -2.25
SNRNP40-207ENST00000491106 SACSQ9NZJ4 4579 aa0.96□□□□□ -2.26
SNRNP40-207ENST00000491106 Q5VSD8 79 aa0.95□□□□□ -2.26
SNRNP40-207ENST00000491106 PLAC4Q8WY50 150 aa0.95□□□□□ -2.26
SNRNP40-207ENST00000491106 R4GN34 69 aa0.95□□□□□ -2.26
SNRNP40-207ENST00000491106 VPS13BQ7Z7G8 4022 aa0.95□□□□□ -2.26
SNRNP40-207ENST00000491106 MT1HL1P0DM35 61 aa0.94□□□□□ -2.26
SNRNP40-207ENST00000491106 C10orf95Q9H7T3 257 aa0.94□□□□□ -2.26
SNRNP40-207ENST00000491106 PKHD1L1Q86WI1 4243 aa0.94□□□□□ -2.26
SNRNP40-207ENST00000491106 LUZP6Q538Z0 58 aa0.93□□□□□ -2.26
SNRNP40-207ENST00000491106 FAT2Q9NYQ8 4349 aa0.93□□□□□ -2.26
SNRNP40-207ENST00000491106 DNAH5Q8TE73 4624 aa0.92□□□□□ -2.26
SNRNP40-207ENST00000491106 STARD9Q9P2P6 4700 aa0.91□□□□□ -2.26
SNRNP40-207ENST00000491106 SPRR5A0A1B0GTR4 108 aa0.91□□□□□ -2.26
SNRNP40-207ENST00000491106 PKHD1P08F94 4074 aa0.91□□□□□ -2.26
SNRNP40-207ENST00000491106 FAT3Q8TDW7 4589 aa0.91□□□□□ -2.26
SNRNP40-207ENST00000491106 TNP1P09430 55 aa0.9□□□□□ -2.27
SNRNP40-207ENST00000491106 CAMK2N1Q7Z7J9 78 aa0.9□□□□□ -2.27
SNRNP40-207ENST00000491106 LRP1Q07954 4544 aaKnown RBP0.89□□□□□ -2.27
SNRNP40-207ENST00000491106 APOBP04114 4563 aaKnown RBP0.89□□□□□ -2.27
SNRNP40-207ENST00000491106 HSPG2P98160 4391 aa0.89□□□□□ -2.27
SNRNP40-207ENST00000491106 KRTAP19-2Q3LHN2 52 aa0.88□□□□□ -2.27
SNRNP40-207ENST00000491106 KRTAP5-7Q6L8G8 165 aa0.88□□□□□ -2.27
SNRNP40-207ENST00000491106 DYNC1H1Q14204 4646 aaKnown RBP0.88□□□□□ -2.27
SNRNP40-207ENST00000491106 TNXBP22105 4242 aa0.88□□□□□ -2.27
SNRNP40-207ENST00000491106 FAT1Q14517 4588 aa0.88□□□□□ -2.27
SNRNP40-207ENST00000491106 HYDINQ4G0P3 5121 aa0.87□□□□□ -2.27
SNRNP40-207ENST00000491106 MUC19Q7Z5P9 8384 aa0.87□□□□□ -2.27
SNRNP40-207ENST00000491106 KRTAP4-1Q9BYQ7 146 aa0.86□□□□□ -2.27
SNRNP40-207ENST00000491106 SPRR2GQ9BYE4 73 aa0.85□□□□□ -2.27
SNRNP40-207ENST00000491106 MUC17Q685J3 4493 aa0.84□□□□□ -2.27
SNRNP40-207ENST00000491106 INE1O15225 51 aa0.83□□□□□ -2.28
SNRNP40-207ENST00000491106 KRTAP12-3P60328 96 aa0.83□□□□□ -2.28
SNRNP40-207ENST00000491106 MYCBP2O75592 4640 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms