RNA–Protein interactions for RNA: ENST00000490192.1

TM9SF3-206, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 4

Gene TM9SF3, Length 884 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-206ENST00000490192 NSD1Q96L73 2696 aaPredicted RBP1.21□□□□□ -2.22
TM9SF3-206ENST00000490192 WNK2Q9Y3S1 2297 aa1.2□□□□□ -2.22
TM9SF3-206ENST00000490192 NBPF19A0A087WUL8 3843 aa1.2□□□□□ -2.22
TM9SF3-206ENST00000490192 VWFP04275 2813 aa1.2□□□□□ -2.22
TM9SF3-206ENST00000490192 ACYP1P07311 99 aa1.2□□□□□ -2.22
TM9SF3-206ENST00000490192 LINC01556Q5JQF7 62 aa1.2□□□□□ -2.22
TM9SF3-206ENST00000490192 HIVEP1P15822 2718 aa1.2□□□□□ -2.22
TM9SF3-206ENST00000490192 DNAH1Q9P2D7 4330 aa1.2□□□□□ -2.22
TM9SF3-206ENST00000490192 MAP1AP78559 2803 aaPredicted RBP1.2□□□□□ -2.22
TM9SF3-206ENST00000490192 CSPG4Q6UVK1 2322 aa1.2□□□□□ -2.22
TM9SF3-206ENST00000490192 SONP18583 2426 aaKnown RBP1.19□□□□□ -2.22
TM9SF3-206ENST00000490192 ITPR2Q14571 2701 aa1.19□□□□□ -2.22
TM9SF3-206ENST00000490192 MTORP42345 2549 aa1.19□□□□□ -2.22
TM9SF3-206ENST00000490192 DEFB131BA0A096LNP1 70 aa1.19□□□□□ -2.22
TM9SF3-206ENST00000490192 TEP1Q99973 2627 aaKnown RBP1.19□□□□□ -2.22
TM9SF3-206ENST00000490192 ACANP16112 2415 aa1.19□□□□□ -2.22
TM9SF3-206ENST00000490192 NF1P21359 2839 aa1.19□□□□□ -2.22
TM9SF3-206ENST00000490192 WNK1Q9H4A3 2382 aa1.19□□□□□ -2.22
TM9SF3-206ENST00000490192 TLN2Q9Y4G6 2542 aa1.18□□□□□ -2.22
TM9SF3-206ENST00000490192 DNAH3Q8TD57 4116 aa1.18□□□□□ -2.22
TM9SF3-206ENST00000490192 COX7BP24311 80 aa1.18□□□□□ -2.22
TM9SF3-206ENST00000490192 SPRR1AP35321 89 aa1.18□□□□□ -2.22
TM9SF3-206ENST00000490192 KCNQ1DNQ9H478 68 aa1.18□□□□□ -2.22
TM9SF3-206ENST00000490192 MAST4O15021 2626 aa1.18□□□□□ -2.22
TM9SF3-206ENST00000490192 FLNBO75369 2602 aaKnown RBP1.18□□□□□ -2.22
TM9SF3-206ENST00000490192 ATP5EP2Q5VTU8 51 aa1.17□□□□□ -2.22
TM9SF3-206ENST00000490192 SETD2Q9BYW2 2564 aaPredicted RBP1.16□□□□□ -2.22
TM9SF3-206ENST00000490192 TENM3Q9P273 2699 aa1.16□□□□□ -2.22
TM9SF3-206ENST00000490192 ANK2Q01484 3957 aa1.16□□□□□ -2.22
TM9SF3-206ENST00000490192 IGLV5-48A0A075B6I7 105 aa1.16□□□□□ -2.22
TM9SF3-206ENST00000490192 APLNQ9ULZ1 77 aa1.16□□□□□ -2.22
TM9SF3-206ENST00000490192 HUWE1Q7Z6Z7 4374 aaKnown RBP1.16□□□□□ -2.22
TM9SF3-206ENST00000490192 DYNC2H1Q8NCM8 4307 aaKnown RBP1.16□□□□□ -2.22
TM9SF3-206ENST00000490192 NBEAL2Q6ZNJ1 2754 aa1.15□□□□□ -2.22
TM9SF3-206ENST00000490192 A0A096LNI7 61 aa1.15□□□□□ -2.23
TM9SF3-206ENST00000490192 ATRQ13535 2644 aa1.15□□□□□ -2.23
TM9SF3-206ENST00000490192 SPRR1BP22528 89 aa1.14□□□□□ -2.23
TM9SF3-206ENST00000490192 UBL5Q9BZL1 73 aa1.14□□□□□ -2.23
TM9SF3-206ENST00000490192 TRRAPQ9Y4A5 3859 aa1.14□□□□□ -2.23
TM9SF3-206ENST00000490192 DNAH9Q9NYC9 4486 aa1.13□□□□□ -2.23
TM9SF3-206ENST00000490192 CMYA5Q8N3K9 4069 aa1.13□□□□□ -2.23
TM9SF3-206ENST00000490192 LCE6AA0A183 80 aa1.13□□□□□ -2.23
TM9SF3-206ENST00000490192 ETDCA0A1B0GVM5 59 aa1.13□□□□□ -2.23
TM9SF3-206ENST00000490192 PRLHP81277 87 aa1.13□□□□□ -2.23
TM9SF3-206ENST00000490192 DEFB105AQ8NG35 78 aa1.13□□□□□ -2.23
TM9SF3-206ENST00000490192 PKD1L1Q8TDX9 2849 aa1.13□□□□□ -2.23
TM9SF3-206ENST00000490192 DNAH10Q8IVF4 4471 aa1.13□□□□□ -2.23
TM9SF3-206ENST00000490192 STAB1Q9NY15 2570 aa1.12□□□□□ -2.23
TM9SF3-206ENST00000490192 NBEAL1Q6ZS30 2694 aa1.12□□□□□ -2.23
TM9SF3-206ENST00000490192 NREPQ16612 68 aa1.12□□□□□ -2.23
TM9SF3-206ENST00000490192 STAB2Q8WWQ8 2551 aa1.12□□□□□ -2.23
TM9SF3-206ENST00000490192 VPS13DQ5THJ4 4388 aa1.12□□□□□ -2.23
TM9SF3-206ENST00000490192 K7EQZ3 153 aa1.11□□□□□ -2.23
TM9SF3-206ENST00000490192 MGAM2Q2M2H8 2515 aa1.11□□□□□ -2.23
TM9SF3-206ENST00000490192 DNAH2Q9P225 4427 aa1.1□□□□□ -2.23
TM9SF3-206ENST00000490192 COL6A5A8TX70 2615 aa1.1□□□□□ -2.23
TM9SF3-206ENST00000490192 DNAH17Q9UFH2 4485 aa1.1□□□□□ -2.23
TM9SF3-206ENST00000490192 DNHD1Q96M86 4753 aa1.09□□□□□ -2.23
TM9SF3-206ENST00000490192 MMP24-AS1A0A0U1RRL7 71 aa1.09□□□□□ -2.23
TM9SF3-206ENST00000490192 KRTAP5-10Q6L8G5 202 aa1.09□□□□□ -2.23
TM9SF3-206ENST00000490192 DNAH11Q96DT5 4516 aa1.09□□□□□ -2.24
TM9SF3-206ENST00000490192 PLECQ15149 4684 aaKnown RBP1.09□□□□□ -2.24
TM9SF3-206ENST00000490192 ALMS1Q8TCU4 4167 aa1.08□□□□□ -2.24
TM9SF3-206ENST00000490192 PRKDCP78527 4128 aaKnown RBP1.08□□□□□ -2.24
TM9SF3-206ENST00000490192 DNAH8Q96JB1 4490 aa1.08□□□□□ -2.24
TM9SF3-206ENST00000490192 CSMD3Q7Z407 3707 aa1.07□□□□□ -2.24
TM9SF3-206ENST00000490192 STARD9Q9P2P6 4700 aa1.07□□□□□ -2.24
TM9SF3-206ENST00000490192 FAT2Q9NYQ8 4349 aa1.07□□□□□ -2.24
TM9SF3-206ENST00000490192 WFDC13Q8IUB5 93 aa1.07□□□□□ -2.24
TM9SF3-206ENST00000490192 COL7A1Q02388 2944 aa1.07□□□□□ -2.24
TM9SF3-206ENST00000490192 LYSTQ99698 3801 aa1.07□□□□□ -2.24
TM9SF3-206ENST00000490192 LRP1BQ9NZR2 4599 aa1.06□□□□□ -2.24
TM9SF3-206ENST00000490192 DNAH7Q8WXX0 4024 aa1.06□□□□□ -2.24
TM9SF3-206ENST00000490192 DNAH6Q9C0G6 4158 aa1.06□□□□□ -2.24
TM9SF3-206ENST00000490192 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
TM9SF3-206ENST00000490192 DNAH5Q8TE73 4624 aa1.04□□□□□ -2.24
TM9SF3-206ENST00000490192 PKD1P98161 4303 aa1.04□□□□□ -2.24
TM9SF3-206ENST00000490192 NDUFB1O75438 58 aa1.04□□□□□ -2.24
TM9SF3-206ENST00000490192 Q5VSD8 79 aa1.04□□□□□ -2.24
TM9SF3-206ENST00000490192 MRPL34Q9BQ48 92 aaKnown RBP1.04□□□□□ -2.24
TM9SF3-206ENST00000490192 AHNAK2Q8IVF2 5795 aa1.04□□□□□ -2.24
TM9SF3-206ENST00000490192 TENM2Q9NT68 2774 aa1.04□□□□□ -2.24
TM9SF3-206ENST00000490192 SACSQ9NZJ4 4579 aa1.04□□□□□ -2.24
TM9SF3-206ENST00000490192 SRRM2Q9UQ35 2752 aaKnown RBP1.03□□□□□ -2.24
TM9SF3-206ENST00000490192 DYNC1H1Q14204 4646 aaKnown RBP1.03□□□□□ -2.24
TM9SF3-206ENST00000490192 SPINK1P00995 79 aa1.03□□□□□ -2.24
TM9SF3-206ENST00000490192 HECTD4Q9Y4D8 3996 aa1.02□□□□□ -2.25
TM9SF3-206ENST00000490192 RPS29P62273 56 aaKnown RBP1.01□□□□□ -2.25
TM9SF3-206ENST00000490192 CRIPTQ9P021 101 aa1.01□□□□□ -2.25
TM9SF3-206ENST00000490192 RYR2Q92736 4967 aa1.01□□□□□ -2.25
TM9SF3-206ENST00000490192 KMT2AQ03164 3969 aa1.01□□□□□ -2.25
TM9SF3-206ENST00000490192 APOBP04114 4563 aaKnown RBP1.01□□□□□ -2.25
TM9SF3-206ENST00000490192 HYDINQ4G0P3 5121 aa1.01□□□□□ -2.25
TM9SF3-206ENST00000490192 PKHD1L1Q86WI1 4243 aa1□□□□□ -2.25
TM9SF3-206ENST00000490192 SMR3BP02814 79 aaPredicted RBP0.99□□□□□ -2.25
TM9SF3-206ENST00000490192 FAT1Q14517 4588 aa0.99□□□□□ -2.25
TM9SF3-206ENST00000490192 TGP01266 2768 aa0.98□□□□□ -2.25
TM9SF3-206ENST00000490192 PKHD1P08F94 4074 aa0.98□□□□□ -2.25
TM9SF3-206ENST00000490192 MT1HL1P0DM35 61 aa0.97□□□□□ -2.25
TM9SF3-206ENST00000490192 C9orf92A6NGG3 77 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 151.8 ms