RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 APOC3P02656 99 aa2□□□□□ -2.09
BRCA1-217ENST00000487825 SEC11AP67812 179 aa2□□□□□ -2.09
BRCA1-217ENST00000487825 Q1T7F1 81 aa2□□□□□ -2.09
BRCA1-217ENST00000487825 CASC2Q6XLA1 102 aa2□□□□□ -2.09
BRCA1-217ENST00000487825 TMEM136Q6ZRR5 245 aa2□□□□□ -2.09
BRCA1-217ENST00000487825 Q6ZRX8 168 aa2□□□□□ -2.09
BRCA1-217ENST00000487825 ARL17AQ8IVW1 177 aa2□□□□□ -2.09
BRCA1-217ENST00000487825 OBSCN-AS1Q96MR7 158 aa2□□□□□ -2.09
BRCA1-217ENST00000487825 A0A1B0GUT8 65 aa1.99□□□□□ -2.09
BRCA1-217ENST00000487825 COX17Q14061 63 aa1.99□□□□□ -2.09
BRCA1-217ENST00000487825 ZNF345Q14585 488 aa1.99□□□□□ -2.09
BRCA1-217ENST00000487825 hADV29S1A0JD25 119 aa1.98□□□□□ -2.09
BRCA1-217ENST00000487825 CCKP06307 115 aa1.98□□□□□ -2.09
BRCA1-217ENST00000487825 SPRR1BP22528 89 aa1.98□□□□□ -2.09
BRCA1-217ENST00000487825 KRTAP12-3P60328 96 aa1.98□□□□□ -2.09
BRCA1-217ENST00000487825 KRTAP12-4P60329 112 aa1.98□□□□□ -2.09
BRCA1-217ENST00000487825 KRTDAPP60985 99 aa1.98□□□□□ -2.09
BRCA1-217ENST00000487825 Q5VV11 94 aa1.98□□□□□ -2.09
BRCA1-217ENST00000487825 TRBV10-3A0A0K0K1G6 114 aa1.97□□□□□ -2.09
BRCA1-217ENST00000487825 HMSDA8MTL9 139 aa1.97□□□□□ -2.09
BRCA1-217ENST00000487825 HIGD1CA8MV81 97 aa1.97□□□□□ -2.09
BRCA1-217ENST00000487825 H3BRM9 83 aa1.97□□□□□ -2.09
BRCA1-217ENST00000487825 RBM3P98179 157 aaKnown RBP1.97□□□□□ -2.09
BRCA1-217ENST00000487825 KRTAP25-1Q3LHN0 102 aa1.97□□□□□ -2.09
BRCA1-217ENST00000487825 TMEM254Q8TBM7 123 aa1.97□□□□□ -2.09
BRCA1-217ENST00000487825 S100ZQ8WXG8 99 aa1.97□□□□□ -2.09
BRCA1-217ENST00000487825 ZNF625Q96I27 306 aaPredicted RBP1.97□□□□□ -2.09
BRCA1-217ENST00000487825 MANBALQ9NQG1 85 aa1.97□□□□□ -2.09
BRCA1-217ENST00000487825 IGIPA6NJ69 53 aa1.96□□□□□ -2.1
BRCA1-217ENST00000487825 NCR3O14931 201 aa1.96□□□□□ -2.1
BRCA1-217ENST00000487825 ADIRFQ15847 76 aa1.96□□□□□ -2.1
BRCA1-217ENST00000487825 KRTAP19-8Q3LI54 63 aa1.96□□□□□ -2.1
BRCA1-217ENST00000487825 SPINT4Q6UDR6 99 aa1.96□□□□□ -2.1
BRCA1-217ENST00000487825 KRTAP8-1Q8IUC2 63 aa1.96□□□□□ -2.1
BRCA1-217ENST00000487825 FAM213BQ8TBF2 198 aa1.96□□□□□ -2.1
BRCA1-217ENST00000487825 PPDPFLQ8WWR9 84 aa1.96□□□□□ -2.1
BRCA1-217ENST00000487825 NDUFC1O43677 76 aa1.95□□□□□ -2.1
BRCA1-217ENST00000487825 IGLC3P0DOY3 106 aa1.95□□□□□ -2.1
BRCA1-217ENST00000487825 S100A7L2Q5SY68 101 aa1.95□□□□□ -2.1
BRCA1-217ENST00000487825 SERP2Q8N6R1 65 aa1.95□□□□□ -2.1
BRCA1-217ENST00000487825 Q96NJ1 140 aa1.95□□□□□ -2.1
BRCA1-217ENST00000487825 CYP4F30PQ9H0H9 118 aa1.95□□□□□ -2.1
BRCA1-217ENST00000487825 GNG13Q9P2W3 67 aa1.95□□□□□ -2.1
BRCA1-217ENST00000487825 SPCS1Q9Y6A9 102 aa1.95□□□□□ -2.1
BRCA1-217ENST00000487825 TRAV12-1A0A0B4J245 112 aa1.94□□□□□ -2.1
BRCA1-217ENST00000487825 A0A1W2PPM0 123 aa1.94□□□□□ -2.1
BRCA1-217ENST00000487825 UMAD1C9J7I0 102 aa1.94□□□□□ -2.1
BRCA1-217ENST00000487825 D6R8Y8 96 aa1.94□□□□□ -2.1
BRCA1-217ENST00000487825 MIR22HGQ0VDD5 57 aa1.94□□□□□ -2.1
BRCA1-217ENST00000487825 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.94□□□□□ -2.1
BRCA1-217ENST00000487825 TRAV13-2A0A0B4J235 113 aa1.93□□□□□ -2.1
BRCA1-217ENST00000487825 SYS1-DBNDD2H3BUS1 97 aa1.93□□□□□ -2.1
BRCA1-217ENST00000487825 P0C880 135 aa1.93□□□□□ -2.1
BRCA1-217ENST00000487825 HINT1P49773 126 aaPredicted RBP1.93□□□□□ -2.1
BRCA1-217ENST00000487825 BVES-AS1Q5T3Y7 98 aa1.93□□□□□ -2.1
BRCA1-217ENST00000487825 CDC42SE1Q9NRR8 79 aa1.93□□□□□ -2.1
BRCA1-217ENST00000487825 ETDBQ3ZM63 59 aa1.92□□□□□ -2.1
BRCA1-217ENST00000487825 SFTA2Q6UW10 78 aa1.92□□□□□ -2.1
BRCA1-217ENST00000487825 PRO2289Q9P1D8 64 aa1.92□□□□□ -2.1
BRCA1-217ENST00000487825 R4GN34 69 aa1.92□□□□□ -2.1
BRCA1-217ENST00000487825 A0A1W2PNM2 257 aa1.91□□□□□ -2.1
BRCA1-217ENST00000487825 HCG22E2RYF7 251 aa1.91□□□□□ -2.1
BRCA1-217ENST00000487825 LINC00158P58513 81 aa1.91□□□□□ -2.1
BRCA1-217ENST00000487825 SPRR2GQ9BYE4 73 aa1.91□□□□□ -2.1
BRCA1-217ENST00000487825 KANTRA0A1W2PQU2 76 aa1.9□□□□□ -2.11
BRCA1-217ENST00000487825 NXT2Q9NPJ8 142 aaKnown RBP1.9□□□□□ -2.11
BRCA1-217ENST00000487825 TRAV23DV6A0A075B6W5 121 aa1.89□□□□□ -2.11
BRCA1-217ENST00000487825 H7BZZ5 65 aa1.89□□□□□ -2.11
BRCA1-217ENST00000487825 K7EMI3 77 aa1.89□□□□□ -2.11
BRCA1-217ENST00000487825 SPTSSBQ8NFR3 76 aa1.89□□□□□ -2.11
BRCA1-217ENST00000487825 CYSTM1Q9H1C7 97 aa1.89□□□□□ -2.11
BRCA1-217ENST00000487825 V9GYV3 84 aa1.89□□□□□ -2.11
BRCA1-217ENST00000487825 KLKP1Q107X0 134 aa1.88□□□□□ -2.11
BRCA1-217ENST00000487825 SPATA45Q537H7 98 aa1.88□□□□□ -2.11
BRCA1-217ENST00000487825 C18orf32Q8TCD1 76 aa1.88□□□□□ -2.11
BRCA1-217ENST00000487825 TEX49A0A1B0GTD5 131 aa1.87□□□□□ -2.11
BRCA1-217ENST00000487825 ACYP1P07311 99 aa1.87□□□□□ -2.11
BRCA1-217ENST00000487825 SMIM13P0DJ93 91 aa1.87□□□□□ -2.11
BRCA1-217ENST00000487825 PMCHL1Q16048 86 aa1.87□□□□□ -2.11
BRCA1-217ENST00000487825 HIGD1BQ9P298 99 aa1.87□□□□□ -2.11
BRCA1-217ENST00000487825 PRO1854Q9UHT4 67 aa1.87□□□□□ -2.11
BRCA1-217ENST00000487825 H3BUT2 72 aa1.86□□□□□ -2.11
BRCA1-217ENST00000487825 MT4P47944 62 aa1.86□□□□□ -2.11
BRCA1-217ENST00000487825 DEFB105AQ8NG35 78 aa1.86□□□□□ -2.11
BRCA1-217ENST00000487825 IFI27L1Q96BM0 104 aa1.86□□□□□ -2.11
BRCA1-217ENST00000487825 DMAC1Q96GE9 116 aa1.86□□□□□ -2.11
BRCA1-217ENST00000487825 SMIM27A0A1W2PRY6 76 aa1.85□□□□□ -2.11
BRCA1-217ENST00000487825 COX6CP09669 75 aa1.85□□□□□ -2.11
BRCA1-217ENST00000487825 ORMDL1Q9P0S3 153 aa1.85□□□□□ -2.11
BRCA1-217ENST00000487825 IGLV5-48A0A075B6I7 105 aa1.84□□□□□ -2.11
BRCA1-217ENST00000487825 TRAV22A0A0B4J277 110 aa1.84□□□□□ -2.11
BRCA1-217ENST00000487825 TMEM170BQ5T4T1 132 aa1.84□□□□□ -2.11
BRCA1-217ENST00000487825 CSAG1Q6PB30 78 aa1.84□□□□□ -2.11
BRCA1-217ENST00000487825 LINC00643Q86TS7 51 aa1.84□□□□□ -2.11
BRCA1-217ENST00000487825 LINC01549A6NIU2 74 aa1.82□□□□□ -2.12
BRCA1-217ENST00000487825 SPINK7P58062 85 aa1.82□□□□□ -2.12
BRCA1-217ENST00000487825 ELOF1P60002 83 aaKnown RBP1.82□□□□□ -2.12
BRCA1-217ENST00000487825 WFDC13Q8IUB5 93 aa1.82□□□□□ -2.12
BRCA1-217ENST00000487825 LOC101927531A0A1B0GV80 90 aa1.81□□□□□ -2.12
BRCA1-217ENST00000487825 CHKB-CPT1BH3BT56 60 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms