RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 HIST1H2BKO60814 126 aa2.59□□□□□ -1.99
SMC4-217ENST00000485867 HIST1H2BJP06899 126 aa2.59□□□□□ -1.99
SMC4-217ENST00000485867 HIST1H2BOP23527 126 aa2.59□□□□□ -1.99
SMC4-217ENST00000485867 HIST1H2BBP33778 126 aa2.59□□□□□ -1.99
SMC4-217ENST00000485867 HIST1H2BDP58876 126 aa2.59□□□□□ -1.99
SMC4-217ENST00000485867 HIST1H2BCP62807 126 aa2.59□□□□□ -1.99
SMC4-217ENST00000485867 HIST2H2BEQ16778 126 aa2.59□□□□□ -1.99
SMC4-217ENST00000485867 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.59□□□□□ -1.99
SMC4-217ENST00000485867 Q6ZQT0 140 aa2.59□□□□□ -1.99
SMC4-217ENST00000485867 HIST1H2BHQ93079 126 aa2.59□□□□□ -1.99
SMC4-217ENST00000485867 HIST1H4GQ99525 98 aa2.59□□□□□ -1.99
SMC4-217ENST00000485867 HIST1H2BNQ99877 126 aa2.59□□□□□ -1.99
SMC4-217ENST00000485867 HIST1H2BMQ99879 126 aa2.59□□□□□ -1.99
SMC4-217ENST00000485867 H3BQ85 93 aa2.58□□□□□ -2
SMC4-217ENST00000485867 K7EQZ3 153 aa2.58□□□□□ -2
SMC4-217ENST00000485867 TMEM256-PLSCR3K7ERE1 68 aa2.58□□□□□ -2
SMC4-217ENST00000485867 PLAC4Q8WY50 150 aa2.58□□□□□ -2
SMC4-217ENST00000485867 A0A0B4J2C4 111 aa2.57□□□□□ -2
SMC4-217ENST00000485867 SPRR5A0A1B0GTR4 108 aa2.57□□□□□ -2
SMC4-217ENST00000485867 A8MUN3 132 aa2.57□□□□□ -2
SMC4-217ENST00000485867 DNAL4O96015 105 aa2.57□□□□□ -2
SMC4-217ENST00000485867 hDV103S1A0JD37 113 aa2.56□□□□□ -2
SMC4-217ENST00000485867 C1orf64Q8NEQ6 169 aa2.56□□□□□ -2
SMC4-217ENST00000485867 MUC19Q7Z5P9 8384 aa2.54□□□□□ -2
SMC4-217ENST00000485867 C9JAW5 83 aa2.52□□□□□ -2.01
SMC4-217ENST00000485867 PDE6GP18545 87 aa2.52□□□□□ -2.01
SMC4-217ENST00000485867 COA6Q5JTJ3 125 aaKnown RBP2.52□□□□□ -2.01
SMC4-217ENST00000485867 HSBP1L1C9JCN9 74 aa2.51□□□□□ -2.01
SMC4-217ENST00000485867 PRO1854Q9UHT4 67 aa2.51□□□□□ -2.01
SMC4-217ENST00000485867 H0YAA0 97 aa2.5□□□□□ -2.01
SMC4-217ENST00000485867 KRTAP19-3Q7Z4W3 81 aa2.5□□□□□ -2.01
SMC4-217ENST00000485867 CEND1Q8N111 149 aa2.5□□□□□ -2.01
SMC4-217ENST00000485867 A0A087WVE0 104 aa2.49□□□□□ -2.01
SMC4-217ENST00000485867 A0A1B0GW54 56 aa2.48□□□□□ -2.01
SMC4-217ENST00000485867 HCG22E2RYF7 251 aa2.48□□□□□ -2.01
SMC4-217ENST00000485867 COX8AP10176 69 aa2.48□□□□□ -2.01
SMC4-217ENST00000485867 CYSTM1Q9H1C7 97 aa2.47□□□□□ -2.01
SMC4-217ENST00000485867 DLEU1O43261 78 aa2.46□□□□□ -2.02
SMC4-217ENST00000485867 CXCL6P80162 114 aa2.46□□□□□ -2.02
SMC4-217ENST00000485867 ADM2Q7Z4H4 148 aa2.46□□□□□ -2.02
SMC4-217ENST00000485867 HIGD1BQ9P298 99 aa2.46□□□□□ -2.02
SMC4-217ENST00000485867 LOC110117498A0A087WWA1 95 aa2.45□□□□□ -2.02
SMC4-217ENST00000485867 MT1EP04732 61 aa2.45□□□□□ -2.02
SMC4-217ENST00000485867 PSMB2P49721 201 aa2.45□□□□□ -2.02
SMC4-217ENST00000485867 FXYD2P54710 66 aa2.45□□□□□ -2.02
SMC4-217ENST00000485867 NREPQ16612 68 aa2.45□□□□□ -2.02
SMC4-217ENST00000485867 KRTAP19-7Q3SYF9 63 aa2.45□□□□□ -2.02
SMC4-217ENST00000485867 HIST3H2BBQ8N257 126 aa2.45□□□□□ -2.02
SMC4-217ENST00000485867 COX6CP09669 75 aa2.44□□□□□ -2.02
SMC4-217ENST00000485867 CASC2Q6XLA1 102 aa2.44□□□□□ -2.02
SMC4-217ENST00000485867 R4GN34 69 aa2.43□□□□□ -2.02
SMC4-217ENST00000485867 BAALC-AS2P0C853 105 aa2.42□□□□□ -2.02
SMC4-217ENST00000485867 AHNAKQ09666 5890 aaKnown RBP2.42□□□□□ -2.02
SMC4-217ENST00000485867 K7ERJ3 54 aa2.41□□□□□ -2.02
SMC4-217ENST00000485867 NDUFC1O43677 76 aa2.41□□□□□ -2.02
SMC4-217ENST00000485867 C14orf144Q96I85 54 aa2.41□□□□□ -2.02
SMC4-217ENST00000485867 HIST1H2BLQ99880 126 aa2.41□□□□□ -2.02
SMC4-217ENST00000485867 JMJD7-PLA2G4BH0Y9G9 81 aa2.4□□□□□ -2.03
SMC4-217ENST00000485867 M0QZ58 72 aa2.4□□□□□ -2.03
SMC4-217ENST00000485867 Q8N9L7 120 aa2.4□□□□□ -2.03
SMC4-217ENST00000485867 C14orf132Q9NPU4 83 aa2.39□□□□□ -2.03
SMC4-217ENST00000485867 BPY2O14599 106 aa2.38□□□□□ -2.03
SMC4-217ENST00000485867 P0C880 135 aa2.38□□□□□ -2.03
SMC4-217ENST00000485867 MT1GP13640 62 aa2.38□□□□□ -2.03
SMC4-217ENST00000485867 LINC01554Q52M75 96 aa2.38□□□□□ -2.03
SMC4-217ENST00000485867 S100A2P29034 98 aa2.36□□□□□ -2.03
SMC4-217ENST00000485867 KRTAP20-2Q3LI61 65 aa2.36□□□□□ -2.03
SMC4-217ENST00000485867 MT1MQ8N339 61 aa2.36□□□□□ -2.03
SMC4-217ENST00000485867 MUC5ACP98088 5654 aa2.35□□□□□ -2.03
SMC4-217ENST00000485867 SCGB1C2P0DMR2 95 aa2.35□□□□□ -2.03
SMC4-217ENST00000485867 SPATA45Q537H7 98 aa2.34□□□□□ -2.03
SMC4-217ENST00000485867 CYP4F30PQ9H0H9 118 aa2.34□□□□□ -2.03
SMC4-217ENST00000485867 K7EP34 96 aa2.33□□□□□ -2.04
SMC4-217ENST00000485867 C20orf197Q8N268 126 aa2.33□□□□□ -2.04
SMC4-217ENST00000485867 HSD52Q0P140 79 aa2.32□□□□□ -2.04
SMC4-217ENST00000485867 ATXN8Q156A1 80 aa2.32□□□□□ -2.04
SMC4-217ENST00000485867 MUC5BQ9HC84 5762 aaPredicted RBP2.31□□□□□ -2.04
SMC4-217ENST00000485867 VAMP8Q9BV40 100 aa2.31□□□□□ -2.04
SMC4-217ENST00000485867 TP53AIP1Q9HCN2 124 aa2.3□□□□□ -2.04
SMC4-217ENST00000485867 NAA38Q9BRA0 125 aaKnown RBP2.29□□□□□ -2.04
SMC4-217ENST00000485867 KRTAP19-5Q3LI72 72 aa2.28□□□□□ -2.04
SMC4-217ENST00000485867 MT1LQ93083 61 aa2.28□□□□□ -2.04
SMC4-217ENST00000485867 BATFQ16520 125 aa2.27□□□□□ -2.05
SMC4-217ENST00000485867 ACYP1P07311 99 aa2.26□□□□□ -2.05
SMC4-217ENST00000485867 TRAV22A0A0B4J277 110 aa2.25□□□□□ -2.05
SMC4-217ENST00000485867 LOC101927531A0A1B0GV80 90 aa2.25□□□□□ -2.05
SMC4-217ENST00000485867 MT-ATP8P03928 68 aa2.24□□□□□ -2.05
SMC4-217ENST00000485867 SYNE1Q8NF91 8797 aaKnown RBP2.24□□□□□ -2.05
SMC4-217ENST00000485867 A0A1W2PPM0 123 aa2.23□□□□□ -2.05
SMC4-217ENST00000485867 S100A6P06703 90 aa2.23□□□□□ -2.05
SMC4-217ENST00000485867 KRTAP12-4P60329 112 aa2.21□□□□□ -2.06
SMC4-217ENST00000485867 S100A1P23297 94 aa2.2□□□□□ -2.06
SMC4-217ENST00000485867 SEC61GP60059 68 aa2.2□□□□□ -2.06
SMC4-217ENST00000485867 A0A0D9SG42 100 aa2.18□□□□□ -2.06
SMC4-217ENST00000485867 PCP4L1A6NKN8 68 aa2.17□□□□□ -2.06
SMC4-217ENST00000485867 KRTAP21-2Q3LI59 83 aa2.17□□□□□ -2.06
SMC4-217ENST00000485867 TSTD3H0UI37 97 aa2.16□□□□□ -2.06
SMC4-217ENST00000485867 H3BT86 120 aa2.16□□□□□ -2.06
SMC4-217ENST00000485867 CAMK2N1Q7Z7J9 78 aa2.16□□□□□ -2.06
SMC4-217ENST00000485867 UBL5Q9BZL1 73 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 141.3 ms