RNA–Protein interactions for RNA: ENST00000484954.1

VPS50-216, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-216ENST00000484954 URB2Q14146 1524 aaKnown RBP-0.94□□□□□ -2.56
VPS50-216ENST00000484954 DNMBPQ6XZF7 1577 aa-0.95□□□□□ -2.56
VPS50-216ENST00000484954 MRPL33O75394 65 aaKnown RBP-0.95□□□□□ -2.56
VPS50-216ENST00000484954 CD163L1Q9NR16 1453 aa-0.95□□□□□ -2.56
VPS50-216ENST00000484954 ARHGAP35Q9NRY4 1499 aa-0.95□□□□□ -2.56
VPS50-216ENST00000484954 THOC2Q8NI27 1593 aaKnown RBP-0.96□□□□□ -2.56
VPS50-216ENST00000484954 INO80Q9ULG1 1556 aaPredicted RBP-0.96□□□□□ -2.56
VPS50-216ENST00000484954 MYO3AQ8NEV4 1616 aa-0.96□□□□□ -2.56
VPS50-216ENST00000484954 CROCC2H7BZ55 1655 aa-0.96□□□□□ -2.56
VPS50-216ENST00000484954 ERVK-7P63135 1459 aa-0.96□□□□□ -2.56
VPS50-216ENST00000484954 GYPAP02724 150 aa-0.96□□□□□ -2.56
VPS50-216ENST00000484954 LINC00643Q86TS7 51 aa-0.96□□□□□ -2.56
VPS50-216ENST00000484954 TCEAL7Q9BRU2 100 aa-0.96□□□□□ -2.56
VPS50-216ENST00000484954 RICTORQ6R327 1708 aa-0.96□□□□□ -2.56
VPS50-216ENST00000484954 PIK3C2BO00750 1634 aa-0.97□□□□□ -2.56
VPS50-216ENST00000484954 CEP162Q5TB80 1403 aa-0.97□□□□□ -2.56
VPS50-216ENST00000484954 ETDCA0A1B0GVM5 59 aa-0.97□□□□□ -2.56
VPS50-216ENST00000484954 SNRPFP62306 86 aaKnown RBP-0.97□□□□□ -2.56
VPS50-216ENST00000484954 UBL5Q9BZL1 73 aa-0.97□□□□□ -2.56
VPS50-216ENST00000484954 SMIM13P0DJ93 91 aa-0.98□□□□□ -2.57
VPS50-216ENST00000484954 DEFB121Q5J5C9 76 aa-0.98□□□□□ -2.57
VPS50-216ENST00000484954 PYY3Q5JQD4 70 aa-0.98□□□□□ -2.57
VPS50-216ENST00000484954 KIF21BO75037 1637 aa-0.98□□□□□ -2.57
VPS50-216ENST00000484954 MAP3K4Q9Y6R4 1608 aa-0.99□□□□□ -2.57
VPS50-216ENST00000484954 ENHOQ6UWT2 76 aa-0.99□□□□□ -2.57
VPS50-216ENST00000484954 HFM1A2PYH4 1435 aa-0.99□□□□□ -2.57
VPS50-216ENST00000484954 CNTLNQ9NXG0 1405 aa-0.99□□□□□ -2.57
VPS50-216ENST00000484954 RALGAPBQ86X10 1494 aa-0.99□□□□□ -2.57
VPS50-216ENST00000484954 CLASP1Q7Z460 1538 aa-0.99□□□□□ -2.57
VPS50-216ENST00000484954 PPLO60437 1756 aa-1□□□□□ -2.57
VPS50-216ENST00000484954 TDRG1Q3Y452 100 aa-1□□□□□ -2.57
VPS50-216ENST00000484954 ATP5EP2Q5VTU8 51 aa-1□□□□□ -2.57
VPS50-216ENST00000484954 S100A16Q96FQ6 103 aaKnown RBP-1□□□□□ -2.57
VPS50-216ENST00000484954 SNHG12Q9BXW3 62 aa-1□□□□□ -2.57
VPS50-216ENST00000484954 KAAG1Q9UBP8 84 aa-1□□□□□ -2.57
VPS50-216ENST00000484954 CFAP43Q8NDM7 1665 aa-1□□□□□ -2.57
VPS50-216ENST00000484954 MYO5CQ9NQX4 1742 aa-1.01□□□□□ -2.57
VPS50-216ENST00000484954 A0A087WXM4 84 aa-1.01□□□□□ -2.57
VPS50-216ENST00000484954 PVALEFA0A1B0GWK0 134 aa-1.01□□□□□ -2.57
VPS50-216ENST00000484954 M0R143 59 aa-1.01□□□□□ -2.57
VPS50-216ENST00000484954 ABCC6O95255 1503 aa-1.01□□□□□ -2.57
VPS50-216ENST00000484954 GLI2P10070 1586 aa-1.01□□□□□ -2.57
VPS50-216ENST00000484954 NHSQ6T4R5 1651 aa-1.01□□□□□ -2.57
VPS50-216ENST00000484954 AKAP12Q02952 1782 aa-1.01□□□□□ -2.57
VPS50-216ENST00000484954 DEFB114Q30KQ6 69 aa-1.02□□□□□ -2.57
VPS50-216ENST00000484954 KDM5DQ9BY66 1539 aa-1.02□□□□□ -2.57
VPS50-216ENST00000484954 ANKRD26Q9UPS8 1709 aa-1.02□□□□□ -2.57
VPS50-216ENST00000484954 KIF14Q15058 1648 aa-1.03□□□□□ -2.57
VPS50-216ENST00000484954 PREX2Q70Z35 1606 aa-1.03□□□□□ -2.57
VPS50-216ENST00000484954 EIF2AK4Q9P2K8 1649 aaKnown RBP-1.03□□□□□ -2.57
VPS50-216ENST00000484954 TTC37Q6PGP7 1564 aa-1.03□□□□□ -2.57
VPS50-216ENST00000484954 POLR2KP53803 58 aaKnown RBP-1.03□□□□□ -2.57
VPS50-216ENST00000484954 FAM208AQ9UK61 1670 aaKnown RBP-1.04□□□□□ -2.58
VPS50-216ENST00000484954 DIP2AQ14689 1571 aa-1.04□□□□□ -2.58
VPS50-216ENST00000484954 KANTRA0A1W2PQU2 76 aa-1.04□□□□□ -2.58
VPS50-216ENST00000484954 S100A8P05109 93 aa-1.04□□□□□ -2.58
VPS50-216ENST00000484954 ABRACLQ9P1F3 81 aa-1.04□□□□□ -2.58
VPS50-216ENST00000484954 SMIM27A0A1W2PRY6 76 aa-1.05□□□□□ -2.58
VPS50-216ENST00000484954 PKIAP61925 76 aa-1.05□□□□□ -2.58
VPS50-216ENST00000484954 WFDC10BQ8IUB3 73 aa-1.05□□□□□ -2.58
VPS50-216ENST00000484954 TIAM1Q13009 1591 aa-1.05□□□□□ -2.58
VPS50-216ENST00000484954 ABCC3O15438 1527 aa-1.05□□□□□ -2.58
VPS50-216ENST00000484954 LMTK2Q8IWU2 1503 aa-1.05□□□□□ -2.58
VPS50-216ENST00000484954 EEA1Q15075 1411 aa-1.06□□□□□ -2.58
VPS50-216ENST00000484954 RRBP1Q9P2E9 1410 aaKnown RBP-1.06□□□□□ -2.58
VPS50-216ENST00000484954 C3P01024 1663 aa-1.06□□□□□ -2.58
VPS50-216ENST00000484954 H3BUT2 72 aa-1.06□□□□□ -2.58
VPS50-216ENST00000484954 LINC00308Q8TCZ7 52 aa-1.06□□□□□ -2.58
VPS50-216ENST00000484954 VPS8Q8N3P4 1428 aa-1.06□□□□□ -2.58
VPS50-216ENST00000484954 H3BVH4 76 aa-1.07□□□□□ -2.58
VPS50-216ENST00000484954 ST20Q9HBF5 79 aa-1.07□□□□□ -2.58
VPS50-216ENST00000484954 UACAQ9BZF9 1416 aa-1.07□□□□□ -2.58
VPS50-216ENST00000484954 MROH1Q8NDA8 1641 aa-1.07□□□□□ -2.58
VPS50-216ENST00000484954 K7EMI3 77 aa-1.09□□□□□ -2.58
VPS50-216ENST00000484954 DEFB131AP59861 70 aa-1.09□□□□□ -2.58
VPS50-216ENST00000484954 C18orf32Q8TCD1 76 aa-1.09□□□□□ -2.58
VPS50-216ENST00000484954 Q9H521 79 aa-1.09□□□□□ -2.58
VPS50-216ENST00000484954 TMEM167BQ9NRX6 74 aa-1.09□□□□□ -2.58
VPS50-216ENST00000484954 V9GYS6 101 aa-1.09□□□□□ -2.58
VPS50-216ENST00000484954 ABCC1P33527 1531 aa-1.1□□□□□ -2.58
VPS50-216ENST00000484954 M0R1W7 72 aa-1.1□□□□□ -2.59
VPS50-216ENST00000484954 ADIRFQ15847 76 aa-1.1□□□□□ -2.59
VPS50-216ENST00000484954 MADDQ8WXG6 1647 aa-1.11□□□□□ -2.59
VPS50-216ENST00000484954 ANKARQ7Z5J8 1434 aa-1.11□□□□□ -2.59
VPS50-216ENST00000484954 IGIPA6NJ69 53 aa-1.11□□□□□ -2.59
VPS50-216ENST00000484954 ATXN8Q156A1 80 aa-1.11□□□□□ -2.59
VPS50-216ENST00000484954 HILPDAQ9Y5L2 63 aa-1.11□□□□□ -2.59
VPS50-216ENST00000484954 CFAP74Q9C0B2 1584 aa-1.12□□□□□ -2.59
VPS50-216ENST00000484954 ALS2Q96Q42 1657 aa-1.12□□□□□ -2.59
VPS50-216ENST00000484954 TTTY10Q9BZA0 68 aa-1.12□□□□□ -2.59
VPS50-216ENST00000484954 NMES1Q9C002 83 aa-1.12□□□□□ -2.59
VPS50-216ENST00000484954 LMO7Q8WWI1 1683 aa-1.13□□□□□ -2.59
VPS50-216ENST00000484954 EFCAB6Q5THR3 1501 aa-1.13□□□□□ -2.59
VPS50-216ENST00000484954 DCAF1Q9Y4B6 1507 aa-1.13□□□□□ -2.59
VPS50-216ENST00000484954 LINC01549A6NIU2 74 aa-1.13□□□□□ -2.59
VPS50-216ENST00000484954 S100A13Q99584 98 aa-1.13□□□□□ -2.59
VPS50-216ENST00000484954 DEFB104AQ8WTQ1 72 aa-1.14□□□□□ -2.59
VPS50-216ENST00000484954 ABCA8O94911 1581 aa-1.15□□□□□ -2.59
VPS50-216ENST00000484954 TFF3Q07654 80 aa-1.15□□□□□ -2.59
VPS50-216ENST00000484954 SCRIBQ14160 1630 aa-1.15□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms