RNA–Protein interactions for RNA: ENST00000484562.5

PATJ-207, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene PATJ, Length 5,448 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-207ENST00000484562 RELNP78509 3460 aa4.18□□□□□ -1.74
PATJ-207ENST00000484562 LCE3CQ5T5A8 94 aa4.17□□□□□ -1.74
PATJ-207ENST00000484562 DNAH2Q9P225 4427 aa4.16□□□□□ -1.74
PATJ-207ENST00000484562 KRTAP19-5Q3LI72 72 aa4.16□□□□□ -1.74
PATJ-207ENST00000484562 SPRR2FQ96RM1 72 aa4.15□□□□□ -1.75
PATJ-207ENST00000484562 ASPMQ8IZT6 3477 aa4.15□□□□□ -1.75
PATJ-207ENST00000484562 LAMA5O15230 3695 aa4.13□□□□□ -1.75
PATJ-207ENST00000484562 AKAP9Q99996 3911 aa4.12□□□□□ -1.75
PATJ-207ENST00000484562 MT1FP04733 61 aa4.09□□□□□ -1.75
PATJ-207ENST00000484562 DNAH10Q8IVF4 4471 aa4.08□□□□□ -1.76
PATJ-207ENST00000484562 DNAH11Q96DT5 4516 aa4.06□□□□□ -1.76
PATJ-207ENST00000484562 DNAH5Q8TE73 4624 aa4.05□□□□□ -1.76
PATJ-207ENST00000484562 TRRAPQ9Y4A5 3859 aa4.04□□□□□ -1.76
PATJ-207ENST00000484562 DNAH1Q9P2D7 4330 aa4.03□□□□□ -1.76
PATJ-207ENST00000484562 PLECQ15149 4684 aaKnown RBP4.03□□□□□ -1.76
PATJ-207ENST00000484562 SMG1Q96Q15 3661 aaKnown RBP3.99□□□□□ -1.77
PATJ-207ENST00000484562 CUBNO60494 3623 aa3.96□□□□□ -1.77
PATJ-207ENST00000484562 FAT1Q14517 4588 aa3.95□□□□□ -1.78
PATJ-207ENST00000484562 CSMD1Q96PZ7 3565 aa3.95□□□□□ -1.78
PATJ-207ENST00000484562 KRTAP19-8Q3LI54 63 aa3.94□□□□□ -1.78
PATJ-207ENST00000484562 CSMD2Q7Z408 3487 aa3.93□□□□□ -1.78
PATJ-207ENST00000484562 ANK2Q01484 3957 aa3.93□□□□□ -1.78
PATJ-207ENST00000484562 DNAH9Q9NYC9 4486 aa3.92□□□□□ -1.78
PATJ-207ENST00000484562 DNAH3Q8TD57 4116 aa3.91□□□□□ -1.78
PATJ-207ENST00000484562 SPRR2EP22531 72 aa3.89□□□□□ -1.79
PATJ-207ENST00000484562 SPRR2BP35325 72 aa3.89□□□□□ -1.79
PATJ-207ENST00000484562 SPRR2AP35326 72 aa3.89□□□□□ -1.79
PATJ-207ENST00000484562 ZNF469Q96JG9 3925 aaPredicted RBP3.89□□□□□ -1.79
PATJ-207ENST00000484562 DNAH17Q9UFH2 4485 aa3.87□□□□□ -1.79
PATJ-207ENST00000484562 LCE3BQ5TA77 95 aa3.85□□□□□ -1.79
PATJ-207ENST00000484562 VPS13CQ709C8 3753 aa3.85□□□□□ -1.79
PATJ-207ENST00000484562 SVEP1Q4LDE5 3571 aa3.85□□□□□ -1.79
PATJ-207ENST00000484562 CMYA5Q8N3K9 4069 aa3.84□□□□□ -1.79
PATJ-207ENST00000484562 KRTAP12-4P60329 112 aa3.84□□□□□ -1.8
PATJ-207ENST00000484562 KRTAP19-1Q8IUB9 90 aa3.83□□□□□ -1.8
PATJ-207ENST00000484562 LRP1Q07954 4544 aaKnown RBP3.79□□□□□ -1.8
PATJ-207ENST00000484562 DYNC1H1Q14204 4646 aaKnown RBP3.79□□□□□ -1.8
PATJ-207ENST00000484562 SPRR2DP22532 72 aa3.79□□□□□ -1.8
PATJ-207ENST00000484562 MT1XP80297 61 aa3.79□□□□□ -1.8
PATJ-207ENST00000484562 LCE2BO14633 110 aa3.78□□□□□ -1.8
PATJ-207ENST00000484562 MT1GP13640 62 aa3.77□□□□□ -1.81
PATJ-207ENST00000484562 SACSQ9NZJ4 4579 aa3.77□□□□□ -1.81
PATJ-207ENST00000484562 VPS13DQ5THJ4 4388 aa3.77□□□□□ -1.81
PATJ-207ENST00000484562 DYNC2H1Q8NCM8 4307 aaKnown RBP3.76□□□□□ -1.81
PATJ-207ENST00000484562 DNAH6Q9C0G6 4158 aa3.76□□□□□ -1.81
PATJ-207ENST00000484562 DNAH8Q96JB1 4490 aa3.75□□□□□ -1.81
PATJ-207ENST00000484562 LCE3DQ9BYE3 92 aa3.74□□□□□ -1.81
PATJ-207ENST00000484562 SPRR5A0A1B0GTR4 108 aa3.73□□□□□ -1.81
PATJ-207ENST00000484562 MT1BP07438 61 aa3.71□□□□□ -1.81
PATJ-207ENST00000484562 LRP1BQ9NZR2 4599 aa3.71□□□□□ -1.82
PATJ-207ENST00000484562 FAT2Q9NYQ8 4349 aa3.7□□□□□ -1.82
PATJ-207ENST00000484562 LCE3EQ5T5B0 92 aa3.7□□□□□ -1.82
PATJ-207ENST00000484562 APOBP04114 4563 aaKnown RBP3.7□□□□□ -1.82
PATJ-207ENST00000484562 RYR1P21817 5038 aa3.69□□□□□ -1.82
PATJ-207ENST00000484562 FAT3Q8TDW7 4589 aa3.69□□□□□ -1.82
PATJ-207ENST00000484562 HERC1Q15751 4861 aa3.68□□□□□ -1.82
PATJ-207ENST00000484562 DNAH7Q8WXX0 4024 aa3.65□□□□□ -1.82
PATJ-207ENST00000484562 KRTAP9-8Q9BYQ0 159 aa3.63□□□□□ -1.83
PATJ-207ENST00000484562 CSMD3Q7Z407 3707 aa3.62□□□□□ -1.83
PATJ-207ENST00000484562 KRTAP4-8A0A0G2JLE6 195 aa3.58□□□□□ -1.84
PATJ-207ENST00000484562 KRTAP4-8Q9BYQ9 185 aa3.58□□□□□ -1.84
PATJ-207ENST00000484562 KRTAP9-3Q9BYQ3 159 aa3.58□□□□□ -1.84
PATJ-207ENST00000484562 KRTAP19-3Q7Z4W3 81 aa3.57□□□□□ -1.84
PATJ-207ENST00000484562 HSPG2P98160 4391 aa3.56□□□□□ -1.84
PATJ-207ENST00000484562 MT1LQ93083 61 aa3.56□□□□□ -1.84
PATJ-207ENST00000484562 PRKDCP78527 4128 aaKnown RBP3.55□□□□□ -1.84
PATJ-207ENST00000484562 DNHD1Q96M86 4753 aa3.55□□□□□ -1.84
PATJ-207ENST00000484562 RYR3Q15413 4870 aa3.54□□□□□ -1.84
PATJ-207ENST00000484562 LCE2CQ5TA81 110 aa3.52□□□□□ -1.85
PATJ-207ENST00000484562 STARD9Q9P2P6 4700 aa3.48□□□□□ -1.85
PATJ-207ENST00000484562 LCE2DQ5TA82 110 aaPredicted RBP3.48□□□□□ -1.85
PATJ-207ENST00000484562 MYCBP2O75592 4640 aa3.47□□□□□ -1.85
PATJ-207ENST00000484562 MT3P25713 68 aa3.47□□□□□ -1.85
PATJ-207ENST00000484562 MT1EP04732 61 aa3.46□□□□□ -1.86
PATJ-207ENST00000484562 RYR2Q92736 4967 aa3.44□□□□□ -1.86
PATJ-207ENST00000484562 VPS13BQ7Z7G8 4022 aa3.43□□□□□ -1.86
PATJ-207ENST00000484562 PKD1P98161 4303 aa3.42□□□□□ -1.86
PATJ-207ENST00000484562 FRAS1Q86XX4 4008 aa3.42□□□□□ -1.86
PATJ-207ENST00000484562 KRTAP17-1Q9BYP8 105 aa3.41□□□□□ -1.86
PATJ-207ENST00000484562 LYSTQ99698 3801 aa3.41□□□□□ -1.86
PATJ-207ENST00000484562 PKHD1L1Q86WI1 4243 aa3.38□□□□□ -1.87
PATJ-207ENST00000484562 KRTAP4-7Q9BYR0 210 aa3.38□□□□□ -1.87
PATJ-207ENST00000484562 MT1MQ8N339 61 aa3.37□□□□□ -1.87
PATJ-207ENST00000484562 PRM1P04553 51 aa3.36□□□□□ -1.87
PATJ-207ENST00000484562 HECTD4Q9Y4D8 3996 aa3.35□□□□□ -1.87
PATJ-207ENST00000484562 KMT2AQ03164 3969 aa3.32□□□□□ -1.88
PATJ-207ENST00000484562 HERC2O95714 4834 aa3.29□□□□□ -1.88
PATJ-207ENST00000484562 MT4P47944 62 aa3.28□□□□□ -1.88
PATJ-207ENST00000484562 KRTAP19-6Q3LI70 58 aa3.28□□□□□ -1.88
PATJ-207ENST00000484562 KIAA1109Q2LD37 5005 aa3.28□□□□□ -1.88
PATJ-207ENST00000484562 LCE1BQ5T7P3 118 aa3.26□□□□□ -1.89
PATJ-207ENST00000484562 BIRC6Q9NR09 4857 aa3.25□□□□□ -1.89
PATJ-207ENST00000484562 LCE1DQ5T752 114 aa3.24□□□□□ -1.89
PATJ-207ENST00000484562 KRTAP19-2Q3LHN2 52 aa3.24□□□□□ -1.89
PATJ-207ENST00000484562 HYDINQ4G0P3 5121 aa3.23□□□□□ -1.89
PATJ-207ENST00000484562 PKHD1P08F94 4074 aa3.23□□□□□ -1.89
PATJ-207ENST00000484562 PCLOQ9Y6V0 5065 aa3.22□□□□□ -1.89
PATJ-207ENST00000484562 MT1AP04731 61 aa3.21□□□□□ -1.9
PATJ-207ENST00000484562 LOC100996750A0A140TA64 210 aa3.19□□□□□ -1.9
PATJ-207ENST00000484562 EPPK1P58107 5090 aaKnown RBP3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms