RNA–Protein interactions for RNA: ENST00000480321.1

MCF2L-225, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 5,727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-225ENST00000480321 LORP23490 312 aaPredicted RBP5.72□□□□□ -1.49
MCF2L-225ENST00000480321 KRTAP8-1Q8IUC2 63 aa5.69□□□□□ -1.5
MCF2L-225ENST00000480321 BSNQ9UPA5 3926 aa5.61□□□□□ -1.51
MCF2L-225ENST00000480321 DNAH2Q9P225 4427 aa5.54□□□□□ -1.52
MCF2L-225ENST00000480321 DNAH5Q8TE73 4624 aa5.44□□□□□ -1.54
MCF2L-225ENST00000480321 VPS13CQ709C8 3753 aa5.43□□□□□ -1.54
MCF2L-225ENST00000480321 SPRR2GQ9BYE4 73 aa5.43□□□□□ -1.54
MCF2L-225ENST00000480321 DNAH10Q8IVF4 4471 aa5.42□□□□□ -1.54
MCF2L-225ENST00000480321 MT1HP80294 61 aa5.41□□□□□ -1.54
MCF2L-225ENST00000480321 DNAH9Q9NYC9 4486 aa5.41□□□□□ -1.54
MCF2L-225ENST00000480321 KRTAP4-1Q9BYQ7 146 aa5.41□□□□□ -1.54
MCF2L-225ENST00000480321 DNAH11Q96DT5 4516 aa5.39□□□□□ -1.55
MCF2L-225ENST00000480321 CSMD3Q7Z407 3707 aa5.36□□□□□ -1.55
MCF2L-225ENST00000480321 KRTAP19-4Q3LI73 84 aa5.36□□□□□ -1.55
MCF2L-225ENST00000480321 DNAH1Q9P2D7 4330 aa5.35□□□□□ -1.55
MCF2L-225ENST00000480321 PLECQ15149 4684 aaKnown RBP5.34□□□□□ -1.55
MCF2L-225ENST00000480321 MT2AP02795 61 aa5.33□□□□□ -1.56
MCF2L-225ENST00000480321 SPRR2FQ96RM1 72 aa5.31□□□□□ -1.56
MCF2L-225ENST00000480321 DNAH17Q9UFH2 4485 aa5.31□□□□□ -1.56
MCF2L-225ENST00000480321 KRTAP10-7P60409 375 aaPredicted RBP5.3□□□□□ -1.56
MCF2L-225ENST00000480321 VPS13DQ5THJ4 4388 aa5.23□□□□□ -1.57
MCF2L-225ENST00000480321 MT1FP04733 61 aa5.2□□□□□ -1.58
MCF2L-225ENST00000480321 LCE3CQ5T5A8 94 aa5.2□□□□□ -1.58
MCF2L-225ENST00000480321 ZNF469Q96JG9 3925 aaPredicted RBP5.19□□□□□ -1.58
MCF2L-225ENST00000480321 FAT1Q14517 4588 aa5.17□□□□□ -1.58
MCF2L-225ENST00000480321 AKAP9Q99996 3911 aa5.16□□□□□ -1.58
MCF2L-225ENST00000480321 KRTAP19-5Q3LI72 72 aa5.16□□□□□ -1.58
MCF2L-225ENST00000480321 DNAH3Q8TD57 4116 aa5.13□□□□□ -1.59
MCF2L-225ENST00000480321 DYNC1H1Q14204 4646 aaKnown RBP5.11□□□□□ -1.59
MCF2L-225ENST00000480321 SACSQ9NZJ4 4579 aa5.11□□□□□ -1.59
MCF2L-225ENST00000480321 DNHD1Q96M86 4753 aa5.09□□□□□ -1.59
MCF2L-225ENST00000480321 DYNC2H1Q8NCM8 4307 aaKnown RBP5.09□□□□□ -1.59
MCF2L-225ENST00000480321 LRP1BQ9NZR2 4599 aa5.08□□□□□ -1.6
MCF2L-225ENST00000480321 DNAH8Q96JB1 4490 aa5.07□□□□□ -1.6
MCF2L-225ENST00000480321 KRTAP19-8Q3LI54 63 aa5.04□□□□□ -1.6
MCF2L-225ENST00000480321 FAT2Q9NYQ8 4349 aa5.03□□□□□ -1.6
MCF2L-225ENST00000480321 RYR1P21817 5038 aa5.03□□□□□ -1.6
MCF2L-225ENST00000480321 SPRR2EP22531 72 aa4.99□□□□□ -1.61
MCF2L-225ENST00000480321 SPRR2BP35325 72 aa4.99□□□□□ -1.61
MCF2L-225ENST00000480321 SPRR2AP35326 72 aa4.99□□□□□ -1.61
MCF2L-225ENST00000480321 KRTAP19-1Q8IUB9 90 aa4.92□□□□□ -1.62
MCF2L-225ENST00000480321 STARD9Q9P2P6 4700 aa4.92□□□□□ -1.62
MCF2L-225ENST00000480321 SPRR5A0A1B0GTR4 108 aa4.91□□□□□ -1.62
MCF2L-225ENST00000480321 APOBP04114 4563 aaKnown RBP4.89□□□□□ -1.63
MCF2L-225ENST00000480321 DNAH6Q9C0G6 4158 aa4.89□□□□□ -1.63
MCF2L-225ENST00000480321 CMYA5Q8N3K9 4069 aa4.87□□□□□ -1.63
MCF2L-225ENST00000480321 LCE3BQ5TA77 95 aa4.86□□□□□ -1.63
MCF2L-225ENST00000480321 MT1XP80297 61 aa4.83□□□□□ -1.64
MCF2L-225ENST00000480321 SPRR2DP22532 72 aa4.83□□□□□ -1.64
MCF2L-225ENST00000480321 LRP1Q07954 4544 aaKnown RBP4.81□□□□□ -1.64
MCF2L-225ENST00000480321 VPS13BQ7Z7G8 4022 aa4.8□□□□□ -1.64
MCF2L-225ENST00000480321 RYR3Q15413 4870 aa4.8□□□□□ -1.64
MCF2L-225ENST00000480321 ANK2Q01484 3957 aa4.8□□□□□ -1.64
MCF2L-225ENST00000480321 KRTAP12-4P60329 112 aa4.76□□□□□ -1.65
MCF2L-225ENST00000480321 DNAH7Q8WXX0 4024 aa4.76□□□□□ -1.65
MCF2L-225ENST00000480321 PRKDCP78527 4128 aaKnown RBP4.76□□□□□ -1.65
MCF2L-225ENST00000480321 FAT3Q8TDW7 4589 aa4.76□□□□□ -1.65
MCF2L-225ENST00000480321 HSPG2P98160 4391 aa4.76□□□□□ -1.65
MCF2L-225ENST00000480321 MT1BP07438 61 aa4.75□□□□□ -1.65
MCF2L-225ENST00000480321 LCE2BO14633 110 aa4.75□□□□□ -1.65
MCF2L-225ENST00000480321 HERC1Q15751 4861 aa4.75□□□□□ -1.65
MCF2L-225ENST00000480321 MT1GP13640 62 aa4.72□□□□□ -1.65
MCF2L-225ENST00000480321 KRTAP17-1Q9BYP8 105 aa4.71□□□□□ -1.66
MCF2L-225ENST00000480321 KMT2AQ03164 3969 aa4.69□□□□□ -1.66
MCF2L-225ENST00000480321 KRTAP9-8Q9BYQ0 159 aa4.68□□□□□ -1.66
MCF2L-225ENST00000480321 KIAA1109Q2LD37 5005 aa4.65□□□□□ -1.66
MCF2L-225ENST00000480321 KRTAP4-8A0A0G2JLE6 195 aa4.62□□□□□ -1.67
MCF2L-225ENST00000480321 KRTAP4-8Q9BYQ9 185 aa4.62□□□□□ -1.67
MCF2L-225ENST00000480321 MYCBP2O75592 4640 aa4.61□□□□□ -1.67
MCF2L-225ENST00000480321 RYR2Q92736 4967 aa4.61□□□□□ -1.67
MCF2L-225ENST00000480321 LYSTQ99698 3801 aa4.6□□□□□ -1.67
MCF2L-225ENST00000480321 KRTAP9-3Q9BYQ3 159 aa4.59□□□□□ -1.67
MCF2L-225ENST00000480321 LCE2CQ5TA81 110 aa4.56□□□□□ -1.68
MCF2L-225ENST00000480321 FRAS1Q86XX4 4008 aa4.55□□□□□ -1.68
MCF2L-225ENST00000480321 LCE3DQ9BYE3 92 aa4.54□□□□□ -1.68
MCF2L-225ENST00000480321 LCE3EQ5T5B0 92 aa4.51□□□□□ -1.69
MCF2L-225ENST00000480321 HECTD4Q9Y4D8 3996 aa4.48□□□□□ -1.69
MCF2L-225ENST00000480321 LCE2DQ5TA82 110 aaPredicted RBP4.48□□□□□ -1.69
MCF2L-225ENST00000480321 MT1LQ93083 61 aa4.47□□□□□ -1.69
MCF2L-225ENST00000480321 PKD1P98161 4303 aa4.47□□□□□ -1.69
MCF2L-225ENST00000480321 BIRC6Q9NR09 4857 aa4.45□□□□□ -1.7
MCF2L-225ENST00000480321 KRTAP19-3Q7Z4W3 81 aa4.43□□□□□ -1.7
MCF2L-225ENST00000480321 HERC2O95714 4834 aa4.42□□□□□ -1.7
MCF2L-225ENST00000480321 PKHD1L1Q86WI1 4243 aa4.4□□□□□ -1.71
MCF2L-225ENST00000480321 MT1EP04732 61 aa4.37□□□□□ -1.71
MCF2L-225ENST00000480321 MT4P47944 62 aa4.36□□□□□ -1.71
MCF2L-225ENST00000480321 PCLOQ9Y6V0 5065 aa4.36□□□□□ -1.71
MCF2L-225ENST00000480321 KRTAP19-2Q3LHN2 52 aa4.35□□□□□ -1.71
MCF2L-225ENST00000480321 KRTAP4-7Q9BYR0 210 aa4.33□□□□□ -1.72
MCF2L-225ENST00000480321 LRP2P98164 4655 aa4.3□□□□□ -1.72
MCF2L-225ENST00000480321 SYNE1Q8NF91 8797 aaKnown RBP4.28□□□□□ -1.72
MCF2L-225ENST00000480321 LCE1BQ5T7P3 118 aa4.27□□□□□ -1.73
MCF2L-225ENST00000480321 LPAP08519 4548 aa4.24□□□□□ -1.73
MCF2L-225ENST00000480321 HYDINQ4G0P3 5121 aa4.23□□□□□ -1.73
MCF2L-225ENST00000480321 MT1MQ8N339 61 aa4.22□□□□□ -1.73
MCF2L-225ENST00000480321 PRM1P04553 51 aa4.22□□□□□ -1.73
MCF2L-225ENST00000480321 MT3P25713 68 aa4.21□□□□□ -1.74
MCF2L-225ENST00000480321 LCE1DQ5T752 114 aa4.2□□□□□ -1.74
MCF2L-225ENST00000480321 EPPK1P58107 5090 aaKnown RBP4.2□□□□□ -1.74
MCF2L-225ENST00000480321 KRTAP19-6Q3LI70 58 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms