RNA–Protein interactions for RNA: ENST00000479487.1

ATRX-205, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 408 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-205ENST00000479487 FLNBO75369 2602 aaKnown RBP1.58□□□□□ -2.16
ATRX-205ENST00000479487 SPINK1P00995 79 aa1.58□□□□□ -2.16
ATRX-205ENST00000479487 CIRBP-AS1Q8TBR5 109 aa1.58□□□□□ -2.16
ATRX-205ENST00000479487 CSMD2Q7Z408 3487 aa1.58□□□□□ -2.16
ATRX-205ENST00000479487 FLG2Q5D862 2391 aaPredicted RBP1.57□□□□□ -2.16
ATRX-205ENST00000479487 TENM1Q9UKZ4 2725 aa1.57□□□□□ -2.16
ATRX-205ENST00000479487 COX6B2Q6YFQ2 88 aa1.57□□□□□ -2.16
ATRX-205ENST00000479487 NBPF19A0A087WUL8 3843 aa1.57□□□□□ -2.16
ATRX-205ENST00000479487 STAB2Q8WWQ8 2551 aa1.56□□□□□ -2.16
ATRX-205ENST00000479487 ITPR2Q14571 2701 aa1.56□□□□□ -2.16
ATRX-205ENST00000479487 LCE3DQ9BYE3 92 aa1.56□□□□□ -2.16
ATRX-205ENST00000479487 DNAH1Q9P2D7 4330 aa1.56□□□□□ -2.16
ATRX-205ENST00000479487 TENM4Q6N022 2769 aa1.55□□□□□ -2.16
ATRX-205ENST00000479487 NBDYA0A0U1RRE5 68 aa1.55□□□□□ -2.16
ATRX-205ENST00000479487 RPL37P61927 97 aaKnown RBP1.55□□□□□ -2.16
ATRX-205ENST00000479487 Q6ZRN7 208 aaPredicted RBP1.55□□□□□ -2.16
ATRX-205ENST00000479487 COL6A5A8TX70 2615 aa1.55□□□□□ -2.16
ATRX-205ENST00000479487 TGP01266 2768 aa1.55□□□□□ -2.16
ATRX-205ENST00000479487 MEGF8Q7Z7M0 2845 aa1.55□□□□□ -2.16
ATRX-205ENST00000479487 MGAM2Q2M2H8 2515 aa1.55□□□□□ -2.16
ATRX-205ENST00000479487 PDZD2O15018 2839 aa1.54□□□□□ -2.16
ATRX-205ENST00000479487 LUZP6Q538Z0 58 aa1.54□□□□□ -2.16
ATRX-205ENST00000479487 SPRR5A0A1B0GTR4 108 aa1.53□□□□□ -2.16
ATRX-205ENST00000479487 TPRXLQ17RH7 258 aa1.53□□□□□ -2.16
ATRX-205ENST00000479487 CRIPTQ9P021 101 aa1.53□□□□□ -2.16
ATRX-205ENST00000479487 APLNQ9ULZ1 77 aa1.53□□□□□ -2.16
ATRX-205ENST00000479487 RPS29P62273 56 aaKnown RBP1.52□□□□□ -2.17
ATRX-205ENST00000479487 KRTAP5-7Q6L8G8 165 aa1.52□□□□□ -2.17
ATRX-205ENST00000479487 SMR3AQ99954 134 aa1.52□□□□□ -2.17
ATRX-205ENST00000479487 CUBNO60494 3623 aa1.52□□□□□ -2.17
ATRX-205ENST00000479487 STAB1Q9NY15 2570 aa1.52□□□□□ -2.17
ATRX-205ENST00000479487 KRTAP13-2Q52LG2 175 aa1.51□□□□□ -2.17
ATRX-205ENST00000479487 FBN1P35555 2871 aaKnown RBP1.51□□□□□ -2.17
ATRX-205ENST00000479487 KRTAP10-10P60014 251 aa1.5□□□□□ -2.17
ATRX-205ENST00000479487 C10orf95Q9H7T3 257 aa1.49□□□□□ -2.17
ATRX-205ENST00000479487 ZNF469Q96JG9 3925 aaPredicted RBP1.49□□□□□ -2.17
ATRX-205ENST00000479487 DNAH8Q96JB1 4490 aa1.48□□□□□ -2.17
ATRX-205ENST00000479487 HMCN1Q96RW7 5635 aa1.48□□□□□ -2.17
ATRX-205ENST00000479487 S4R3F8 94 aa1.48□□□□□ -2.17
ATRX-205ENST00000479487 DNAH10Q8IVF4 4471 aa1.47□□□□□ -2.17
ATRX-205ENST00000479487 A0A0D9SG42 100 aa1.47□□□□□ -2.17
ATRX-205ENST00000479487 KRTAP13-4Q3LI77 160 aa1.47□□□□□ -2.17
ATRX-205ENST00000479487 COL7A1Q02388 2944 aa1.47□□□□□ -2.17
ATRX-205ENST00000479487 DMBT1Q9UGM3 2413 aaPredicted RBP1.47□□□□□ -2.17
ATRX-205ENST00000479487 J3QKU1 62 aa1.46□□□□□ -2.18
ATRX-205ENST00000479487 DNAH17Q9UFH2 4485 aa1.46□□□□□ -2.18
ATRX-205ENST00000479487 DNAH3Q8TD57 4116 aa1.46□□□□□ -2.18
ATRX-205ENST00000479487 HUWE1Q7Z6Z7 4374 aaKnown RBP1.45□□□□□ -2.18
ATRX-205ENST00000479487 TRRAPQ9Y4A5 3859 aa1.45□□□□□ -2.18
ATRX-205ENST00000479487 DNAH9Q9NYC9 4486 aa1.45□□□□□ -2.18
ATRX-205ENST00000479487 DYNC2H1Q8NCM8 4307 aaKnown RBP1.44□□□□□ -2.18
ATRX-205ENST00000479487 VPS13DQ5THJ4 4388 aa1.44□□□□□ -2.18
ATRX-205ENST00000479487 M0QZ58 72 aa1.43□□□□□ -2.18
ATRX-205ENST00000479487 KRTAP12-1P59990 96 aa1.43□□□□□ -2.18
ATRX-205ENST00000479487 PLAC4Q8WY50 150 aa1.43□□□□□ -2.18
ATRX-205ENST00000479487 ANK2Q01484 3957 aa1.43□□□□□ -2.18
ATRX-205ENST00000479487 PRKDCP78527 4128 aaKnown RBP1.42□□□□□ -2.18
ATRX-205ENST00000479487 FBN3Q75N90 2809 aa1.42□□□□□ -2.18
ATRX-205ENST00000479487 C9orf92A6NGG3 77 aa1.42□□□□□ -2.18
ATRX-205ENST00000479487 CSMD3Q7Z407 3707 aa1.41□□□□□ -2.18
ATRX-205ENST00000479487 LYSTQ99698 3801 aa1.4□□□□□ -2.18
ATRX-205ENST00000479487 KRTAP21-2Q3LI59 83 aa1.4□□□□□ -2.19
ATRX-205ENST00000479487 DNAH11Q96DT5 4516 aa1.39□□□□□ -2.19
ATRX-205ENST00000479487 HECTD4Q9Y4D8 3996 aa1.39□□□□□ -2.19
ATRX-205ENST00000479487 FRAS1Q86XX4 4008 aa1.39□□□□□ -2.19
ATRX-205ENST00000479487 DNAH7Q8WXX0 4024 aa1.38□□□□□ -2.19
ATRX-205ENST00000479487 DNAH6Q9C0G6 4158 aa1.38□□□□□ -2.19
ATRX-205ENST00000479487 CMYA5Q8N3K9 4069 aa1.38□□□□□ -2.19
ATRX-205ENST00000479487 DNAH2Q9P225 4427 aa1.38□□□□□ -2.19
ATRX-205ENST00000479487 PLECQ15149 4684 aaKnown RBP1.36□□□□□ -2.19
ATRX-205ENST00000479487 PRO2289Q9P1D8 64 aa1.36□□□□□ -2.19
ATRX-205ENST00000479487 SACSQ9NZJ4 4579 aa1.36□□□□□ -2.19
ATRX-205ENST00000479487 INE1O15225 51 aa1.34□□□□□ -2.19
ATRX-205ENST00000479487 DNAH5Q8TE73 4624 aa1.33□□□□□ -2.2
ATRX-205ENST00000479487 R4GN34 69 aa1.33□□□□□ -2.2
ATRX-205ENST00000479487 PKHD1L1Q86WI1 4243 aa1.33□□□□□ -2.2
ATRX-205ENST00000479487 STARD9Q9P2P6 4700 aa1.31□□□□□ -2.2
ATRX-205ENST00000479487 LRP1BQ9NZR2 4599 aa1.31□□□□□ -2.2
ATRX-205ENST00000479487 KRTAP10-4P60372 401 aaPredicted RBP1.3□□□□□ -2.2
ATRX-205ENST00000479487 KMT2AQ03164 3969 aa1.29□□□□□ -2.2
ATRX-205ENST00000479487 VPS13BQ7Z7G8 4022 aa1.29□□□□□ -2.2
ATRX-205ENST00000479487 PKHD1P08F94 4074 aa1.29□□□□□ -2.2
ATRX-205ENST00000479487 TNP1P09430 55 aa1.28□□□□□ -2.2
ATRX-205ENST00000479487 Q5VSD8 79 aa1.28□□□□□ -2.2
ATRX-205ENST00000479487 APOBP04114 4563 aaKnown RBP1.27□□□□□ -2.21
ATRX-205ENST00000479487 LRP1Q07954 4544 aaKnown RBP1.27□□□□□ -2.21
ATRX-205ENST00000479487 PKD1P98161 4303 aa1.27□□□□□ -2.21
ATRX-205ENST00000479487 TNXBP22105 4242 aa1.26□□□□□ -2.21
ATRX-205ENST00000479487 SMR3BP02814 79 aaPredicted RBP1.26□□□□□ -2.21
ATRX-205ENST00000479487 FAT2Q9NYQ8 4349 aa1.26□□□□□ -2.21
ATRX-205ENST00000479487 DYNC1H1Q14204 4646 aaKnown RBP1.24□□□□□ -2.21
ATRX-205ENST00000479487 FAT3Q8TDW7 4589 aa1.23□□□□□ -2.21
ATRX-205ENST00000479487 FAT1Q14517 4588 aa1.22□□□□□ -2.21
ATRX-205ENST00000479487 HSPG2P98160 4391 aa1.22□□□□□ -2.21
ATRX-205ENST00000479487 MYCBP2O75592 4640 aa1.19□□□□□ -2.22
ATRX-205ENST00000479487 MT1HL1P0DM35 61 aa1.18□□□□□ -2.22
ATRX-205ENST00000479487 CRCT1Q9UGL9 99 aa1.18□□□□□ -2.22
ATRX-205ENST00000479487 FLGP20930 4061 aaPredicted RBP1.17□□□□□ -2.22
ATRX-205ENST00000479487 KRTAP12-4P60329 112 aa1.16□□□□□ -2.22
ATRX-205ENST00000479487 KRTAP4-1Q9BYQ7 146 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms