RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 HTN1P15515 57 aa2.23□□□□□ -2.05
RFC4-212ENST00000479307 CNBPP62633 177 aaKnown RBP2.23□□□□□ -2.05
RFC4-212ENST00000479307 Q86TA4 180 aa2.23□□□□□ -2.05
RFC4-212ENST00000479307 CNFNQ9BYD5 112 aa2.23□□□□□ -2.05
RFC4-212ENST00000479307 PRO0255Q9UI72 69 aa2.23□□□□□ -2.05
RFC4-212ENST00000479307 LENEPQ9Y5L5 61 aa2.23□□□□□ -2.05
RFC4-212ENST00000479307 TRGV2A0A075B6R0 118 aa2.22□□□□□ -2.05
RFC4-212ENST00000479307 MT1HP80294 61 aa2.22□□□□□ -2.05
RFC4-212ENST00000479307 PDE6HQ13956 83 aa2.22□□□□□ -2.05
RFC4-212ENST00000479307 LYZL1Q6UWQ5 148 aa2.22□□□□□ -2.05
RFC4-212ENST00000479307 KRTAP13-1Q8IUC0 172 aa2.22□□□□□ -2.05
RFC4-212ENST00000479307 C9orf163Q8N9P6 203 aa2.22□□□□□ -2.05
RFC4-212ENST00000479307 ORMDL1Q9P0S3 153 aa2.22□□□□□ -2.05
RFC4-212ENST00000479307 LINC01558Q9Y6Z2 57 aa2.22□□□□□ -2.05
RFC4-212ENST00000479307 GPR98Q8WXG9 6306 aa2.22□□□□□ -2.05
RFC4-212ENST00000479307 A0A1W2PNM2 257 aa2.21□□□□□ -2.06
RFC4-212ENST00000479307 H0YGX0 51 aa2.21□□□□□ -2.06
RFC4-212ENST00000479307 PDE6GP18545 87 aa2.21□□□□□ -2.06
RFC4-212ENST00000479307 KRTAP20-1Q3LI63 56 aa2.21□□□□□ -2.06
RFC4-212ENST00000479307 KRTAP6-3Q3LI67 103 aa2.21□□□□□ -2.06
RFC4-212ENST00000479307 Q6ZQT0 140 aa2.21□□□□□ -2.06
RFC4-212ENST00000479307 SPACA4Q8TDM5 124 aa2.21□□□□□ -2.06
RFC4-212ENST00000479307 PLAC8Q9NZF1 115 aa2.21□□□□□ -2.06
RFC4-212ENST00000479307 MRPL36Q9P0J6 103 aaKnown RBP2.21□□□□□ -2.06
RFC4-212ENST00000479307 TRBV10-1A0A0K0K1A3 114 aa2.2□□□□□ -2.06
RFC4-212ENST00000479307 MIR22HGQ0VDD5 57 aa2.2□□□□□ -2.06
RFC4-212ENST00000479307 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.2□□□□□ -2.06
RFC4-212ENST00000479307 TRGV1A0A0A0MS02 117 aa2.19□□□□□ -2.06
RFC4-212ENST00000479307 TRAV21A0A0B4J279 112 aa2.19□□□□□ -2.06
RFC4-212ENST00000479307 TPRXLQ17RH7 258 aa2.19□□□□□ -2.06
RFC4-212ENST00000479307 KRTAP19-2Q3LHN2 52 aa2.19□□□□□ -2.06
RFC4-212ENST00000479307 C10orf113Q5VZT2 155 aa2.19□□□□□ -2.06
RFC4-212ENST00000479307 Q8TAT8 98 aa2.19□□□□□ -2.06
RFC4-212ENST00000479307 COX7B2Q8TF08 81 aa2.19□□□□□ -2.06
RFC4-212ENST00000479307 LINC00208Q96KT6 92 aa2.19□□□□□ -2.06
RFC4-212ENST00000479307 LOC110117498A0A087WWA1 95 aa2.18□□□□□ -2.06
RFC4-212ENST00000479307 SPAG11BQ08648 103 aa2.18□□□□□ -2.06
RFC4-212ENST00000479307 SPAG11AQ6PDA7 123 aa2.18□□□□□ -2.06
RFC4-212ENST00000479307 ZNF625Q96I27 306 aaPredicted RBP2.18□□□□□ -2.06
RFC4-212ENST00000479307 C20orf166-AS1Q96NR2 134 aa2.18□□□□□ -2.06
RFC4-212ENST00000479307 SMIM2Q9BVW6 85 aa2.18□□□□□ -2.06
RFC4-212ENST00000479307 KRTAP4-1Q9BYQ7 146 aa2.18□□□□□ -2.06
RFC4-212ENST00000479307 H3BPC8 53 aa2.17□□□□□ -2.06
RFC4-212ENST00000479307 ERHP84090 104 aaKnown RBP2.17□□□□□ -2.06
RFC4-212ENST00000479307 C1orf137Q5JT78 98 aa2.17□□□□□ -2.06
RFC4-212ENST00000479307 CSAG1Q6PB30 78 aa2.17□□□□□ -2.06
RFC4-212ENST00000479307 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.17□□□□□ -2.06
RFC4-212ENST00000479307 TRGV4A0A0C4DH28 118 aa2.16□□□□□ -2.06
RFC4-212ENST00000479307 KRTAP26-1Q6PEX3 210 aa2.15□□□□□ -2.07
RFC4-212ENST00000479307 DMAC1Q96GE9 116 aa2.15□□□□□ -2.07
RFC4-212ENST00000479307 MDN1Q9NU22 5596 aa2.14□□□□□ -2.07
RFC4-212ENST00000479307 IGHV3-64A0A075B6Q5 118 aa2.14□□□□□ -2.07
RFC4-212ENST00000479307 H0Y9P7 68 aa2.14□□□□□ -2.07
RFC4-212ENST00000479307 SPINK9Q5DT21 86 aa2.14□□□□□ -2.07
RFC4-212ENST00000479307 MUC19Q7Z5P9 8384 aa2.14□□□□□ -2.07
RFC4-212ENST00000479307 NCR3O14931 201 aa2.13□□□□□ -2.07
RFC4-212ENST00000479307 MGPP08493 103 aa2.13□□□□□ -2.07
RFC4-212ENST00000479307 LINC00308Q8TCZ7 52 aa2.13□□□□□ -2.07
RFC4-212ENST00000479307 ETDCA0A1B0GVM5 59 aa2.12□□□□□ -2.07
RFC4-212ENST00000479307 NDUFA1O15239 70 aa2.12□□□□□ -2.07
RFC4-212ENST00000479307 SPINK7P58062 85 aa2.12□□□□□ -2.07
RFC4-212ENST00000479307 KRTAP12-3P60328 96 aa2.12□□□□□ -2.07
RFC4-212ENST00000479307 SPATA8Q6RVD6 105 aa2.12□□□□□ -2.07
RFC4-212ENST00000479307 SPRR4Q96PI1 79 aa2.12□□□□□ -2.07
RFC4-212ENST00000479307 KCNQ1DNQ9H478 68 aa2.12□□□□□ -2.07
RFC4-212ENST00000479307 KMT2DO14686 5537 aa2.12□□□□□ -2.07
RFC4-212ENST00000479307 HMCN1Q96RW7 5635 aa2.12□□□□□ -2.07
RFC4-212ENST00000479307 IGKV2-29A2NJV5 120 aaPredicted RBP2.11□□□□□ -2.07
RFC4-212ENST00000479307 UQCR11O14957 56 aa2.11□□□□□ -2.07
RFC4-212ENST00000479307 CRIP1P50238 77 aa2.11□□□□□ -2.07
RFC4-212ENST00000479307 COX6A2Q02221 97 aa2.1□□□□□ -2.07
RFC4-212ENST00000479307 TRBV6-4A0A1B0GX49 114 aa2.09□□□□□ -2.07
RFC4-212ENST00000479307 M0R2T5 61 aa2.09□□□□□ -2.07
RFC4-212ENST00000479307 COA5Q86WW8 74 aa2.09□□□□□ -2.07
RFC4-212ENST00000479307 A0A096LNI7 61 aa2.08□□□□□ -2.08
RFC4-212ENST00000479307 H3BRN7 92 aa2.08□□□□□ -2.08
RFC4-212ENST00000479307 POLR2KP53803 58 aaKnown RBP2.07□□□□□ -2.08
RFC4-212ENST00000479307 KRTAP12-4P60329 112 aa2.07□□□□□ -2.08
RFC4-212ENST00000479307 SMIM11BQ8TCY0 68 aa2.07□□□□□ -2.08
RFC4-212ENST00000479307 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.06□□□□□ -2.08
RFC4-212ENST00000479307 LINC00959A0A1B0GUT2 108 aa2.06□□□□□ -2.08
RFC4-212ENST00000479307 KRTAP19-6Q3LI70 58 aa2.06□□□□□ -2.08
RFC4-212ENST00000479307 IGKV3OR2-268A0A0C4DH90 116 aa2.05□□□□□ -2.08
RFC4-212ENST00000479307 KRTAP2-3P0C7H8 128 aa2.05□□□□□ -2.08
RFC4-212ENST00000479307 RNASE3P12724 160 aaKnown RBP2.05□□□□□ -2.08
RFC4-212ENST00000479307 COX7BP24311 80 aa2.05□□□□□ -2.08
RFC4-212ENST00000479307 COX17Q14061 63 aa2.05□□□□□ -2.08
RFC4-212ENST00000479307 KRTAP2-4Q9BYR9 128 aa2.05□□□□□ -2.08
RFC4-212ENST00000479307 ANGP03950 147 aaKnown RBP2.04□□□□□ -2.08
RFC4-212ENST00000479307 LINC00158P58513 81 aa2.03□□□□□ -2.08
RFC4-212ENST00000479307 CLPSL2Q6UWE3 100 aa2.02□□□□□ -2.09
RFC4-212ENST00000479307 LINC00472Q9H8W2 130 aa2.02□□□□□ -2.09
RFC4-212ENST00000479307 RPL39P62891 51 aaKnown RBP2.01□□□□□ -2.09
RFC4-212ENST00000479307 KRTAP5-7Q6L8G8 165 aa2.01□□□□□ -2.09
RFC4-212ENST00000479307 Q6ZQY7 126 aa2.01□□□□□ -2.09
RFC4-212ENST00000479307 RPL39LQ96EH5 51 aaKnown RBP2.01□□□□□ -2.09
RFC4-212ENST00000479307 IGKV2-40A0A087WW87 121 aaPredicted RBP2□□□□□ -2.09
RFC4-212ENST00000479307 GVQW2A0A096LPI5 108 aaPredicted RBP2□□□□□ -2.09
RFC4-212ENST00000479307 A0A1B0GU69 56 aa2□□□□□ -2.09
RFC4-212ENST00000479307 IGKV2D-40P01614 121 aaPredicted RBP2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms