RNA–Protein interactions for RNA: ENST00000475427.2

PDE6C-202, Transcript of phosphodiesterase 6C, humanhuman

TSL 2

Gene PDE6C, Length 476 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-202ENST00000475427 NRXN3Q9Y4C0 1643 aa-2.25□□□□□ -2.77
PDE6C-202ENST00000475427 RALGAPBQ86X10 1494 aa-2.26□□□□□ -2.77
PDE6C-202ENST00000475427 CEBPZOSA8MTT3 80 aa-2.26□□□□□ -2.77
PDE6C-202ENST00000475427 HMGA1P17096 107 aaKnown RBP-2.26□□□□□ -2.77
PDE6C-202ENST00000475427 S100A1P23297 94 aa-2.26□□□□□ -2.77
PDE6C-202ENST00000475427 PPP3R1P63098 170 aa-2.26□□□□□ -2.77
PDE6C-202ENST00000475427 NHSQ6T4R5 1651 aa-2.26□□□□□ -2.77
PDE6C-202ENST00000475427 CFAP43Q8NDM7 1665 aa-2.26□□□□□ -2.77
PDE6C-202ENST00000475427 ANKRD26Q9UPS8 1709 aa-2.26□□□□□ -2.77
PDE6C-202ENST00000475427 RRBP1Q9P2E9 1410 aaKnown RBP-2.26□□□□□ -2.77
PDE6C-202ENST00000475427 TTC37Q6PGP7 1564 aa-2.27□□□□□ -2.77
PDE6C-202ENST00000475427 XIRP2A4UGR9 3374 aa-2.28□□□□□ -2.77
PDE6C-202ENST00000475427 GNG4P50150 75 aa-2.28□□□□□ -2.77
PDE6C-202ENST00000475427 RABAC1Q9UI14 185 aa-2.28□□□□□ -2.77
PDE6C-202ENST00000475427 MYO3AQ8NEV4 1616 aa-2.28□□□□□ -2.77
PDE6C-202ENST00000475427 AKAP12Q02952 1782 aa-2.28□□□□□ -2.78
PDE6C-202ENST00000475427 SMIM27A0A1W2PRY6 76 aa-2.29□□□□□ -2.78
PDE6C-202ENST00000475427 EIF2AK4Q9P2K8 1649 aaKnown RBP-2.29□□□□□ -2.78
PDE6C-202ENST00000475427 BRCA2P51587 3418 aa-2.29□□□□□ -2.78
PDE6C-202ENST00000475427 GLI2P10070 1586 aa-2.3□□□□□ -2.78
PDE6C-202ENST00000475427 WFDC10BQ8IUB3 73 aa-2.3□□□□□ -2.78
PDE6C-202ENST00000475427 TMEM203Q969S6 136 aa-2.3□□□□□ -2.78
PDE6C-202ENST00000475427 VPS13AQ96RL7 3174 aa-2.31□□□□□ -2.78
PDE6C-202ENST00000475427 C3P01024 1663 aa-2.31□□□□□ -2.78
PDE6C-202ENST00000475427 DIP2AQ14689 1571 aa-2.31□□□□□ -2.78
PDE6C-202ENST00000475427 ABCC6O95255 1503 aa-2.31□□□□□ -2.78
PDE6C-202ENST00000475427 MROH1Q8NDA8 1641 aa-2.31□□□□□ -2.78
PDE6C-202ENST00000475427 PVALEFA0A1B0GWK0 134 aa-2.32□□□□□ -2.78
PDE6C-202ENST00000475427 ENHOQ6UWT2 76 aa-2.32□□□□□ -2.78
PDE6C-202ENST00000475427 GTF2H5Q6ZYL4 71 aa-2.32□□□□□ -2.78
PDE6C-202ENST00000475427 C2orf88Q9BSF0 95 aa-2.33□□□□□ -2.78
PDE6C-202ENST00000475427 CORTO00230 105 aa-2.34□□□□□ -2.78
PDE6C-202ENST00000475427 CCDC180Q9P1Z9 1646 aa-2.35□□□□□ -2.78
PDE6C-202ENST00000475427 TIAM1Q13009 1591 aa-2.35□□□□□ -2.79
PDE6C-202ENST00000475427 A0A087WXM4 84 aa-2.35□□□□□ -2.79
PDE6C-202ENST00000475427 DLEU1O43261 78 aa-2.35□□□□□ -2.79
PDE6C-202ENST00000475427 LINC00643Q86TS7 51 aa-2.35□□□□□ -2.79
PDE6C-202ENST00000475427 LMO7Q8WWI1 1683 aa-2.35□□□□□ -2.79
PDE6C-202ENST00000475427 NDUFA2O43678 99 aa-2.36□□□□□ -2.79
PDE6C-202ENST00000475427 DEFB114Q30KQ6 69 aa-2.36□□□□□ -2.79
PDE6C-202ENST00000475427 ATP5EP2Q5VTU8 51 aa-2.36□□□□□ -2.79
PDE6C-202ENST00000475427 TSC22D3Q99576 134 aa-2.36□□□□□ -2.79
PDE6C-202ENST00000475427 KDM5DQ9BY66 1539 aa-2.37□□□□□ -2.79
PDE6C-202ENST00000475427 SCRIBQ14160 1630 aa-2.37□□□□□ -2.79
PDE6C-202ENST00000475427 SMIM13P0DJ93 91 aa-2.37□□□□□ -2.79
PDE6C-202ENST00000475427 SNRPFP62306 86 aaKnown RBP-2.37□□□□□ -2.79
PDE6C-202ENST00000475427 DEFB133Q30KQ1 61 aa-2.37□□□□□ -2.79
PDE6C-202ENST00000475427 DEFB131AP59861 70 aa-2.38□□□□□ -2.79
PDE6C-202ENST00000475427 CEP162Q5TB80 1403 aa-2.4□□□□□ -2.79
PDE6C-202ENST00000475427 GYPAP02724 150 aa-2.4□□□□□ -2.79
PDE6C-202ENST00000475427 S100A10P60903 97 aa-2.4□□□□□ -2.79
PDE6C-202ENST00000475427 LINC00308Q8TCZ7 52 aa-2.4□□□□□ -2.79
PDE6C-202ENST00000475427 NMES1Q9C002 83 aa-2.4□□□□□ -2.79
PDE6C-202ENST00000475427 MADDQ8WXG6 1647 aa-2.4□□□□□ -2.79
PDE6C-202ENST00000475427 A0A1B0GV90 55 aa-2.41□□□□□ -2.8
PDE6C-202ENST00000475427 CD52P31358 61 aa-2.42□□□□□ -2.8
PDE6C-202ENST00000475427 TMEM167BQ9NRX6 74 aa-2.42□□□□□ -2.8
PDE6C-202ENST00000475427 MROH2AA6NES4 1674 aa-2.42□□□□□ -2.8
PDE6C-202ENST00000475427 GNG8Q9UK08 70 aa-2.43□□□□□ -2.8
PDE6C-202ENST00000475427 LMTK2Q8IWU2 1503 aa-2.43□□□□□ -2.8
PDE6C-202ENST00000475427 ALS2Q96Q42 1657 aa-2.44□□□□□ -2.8
PDE6C-202ENST00000475427 DEFB121Q5J5C9 76 aa-2.45□□□□□ -2.8
PDE6C-202ENST00000475427 ANKARQ7Z5J8 1434 aa-2.45□□□□□ -2.8
PDE6C-202ENST00000475427 NCMAPQ5T1S8 102 aa-2.46□□□□□ -2.8
PDE6C-202ENST00000475427 LOC105371267A0A1B0GV96 52 aa-2.47□□□□□ -2.8
PDE6C-202ENST00000475427 HTN1P15515 57 aa-2.47□□□□□ -2.8
PDE6C-202ENST00000475427 RHPN1-AS1Q9BWJ2 59 aa-2.47□□□□□ -2.8
PDE6C-202ENST00000475427 EFCAB6Q5THR3 1501 aa-2.47□□□□□ -2.81
PDE6C-202ENST00000475427 VPS8Q8N3P4 1428 aa-2.48□□□□□ -2.81
PDE6C-202ENST00000475427 S100A16Q96FQ6 103 aaKnown RBP-2.48□□□□□ -2.81
PDE6C-202ENST00000475427 KANTRA0A1W2PQU2 76 aa-2.49□□□□□ -2.81
PDE6C-202ENST00000475427 K7EMI3 77 aa-2.49□□□□□ -2.81
PDE6C-202ENST00000475427 TCEAL7Q9BRU2 100 aa-2.49□□□□□ -2.81
PDE6C-202ENST00000475427 UTRNP46939 3433 aa-2.49□□□□□ -2.81
PDE6C-202ENST00000475427 H3BVH4 76 aa-2.5□□□□□ -2.81
PDE6C-202ENST00000475427 PYY3Q5JQD4 70 aa-2.5□□□□□ -2.81
PDE6C-202ENST00000475427 SMIM2Q9BVW6 85 aa-2.5□□□□□ -2.81
PDE6C-202ENST00000475427 H3BUT2 72 aa-2.51□□□□□ -2.81
PDE6C-202ENST00000475427 A0A096LNI7 61 aa-2.52□□□□□ -2.81
PDE6C-202ENST00000475427 M0R1W7 72 aa-2.52□□□□□ -2.81
PDE6C-202ENST00000475427 HMGN1P05114 100 aa-2.52□□□□□ -2.81
PDE6C-202ENST00000475427 ATXN8Q156A1 80 aa-2.54□□□□□ -2.82
PDE6C-202ENST00000475427 SYCP2Q9BX26 1530 aa-2.54□□□□□ -2.82
PDE6C-202ENST00000475427 SNHG12Q9BXW3 62 aa-2.55□□□□□ -2.82
PDE6C-202ENST00000475427 ABCC3O15438 1527 aa-2.56□□□□□ -2.82
PDE6C-202ENST00000475427 CNTLNQ9NXG0 1405 aa-2.56□□□□□ -2.82
PDE6C-202ENST00000475427 DDX60Q8IY21 1712 aaKnown RBP-2.58□□□□□ -2.82
PDE6C-202ENST00000475427 S100A12P80511 92 aa-2.58□□□□□ -2.82
PDE6C-202ENST00000475427 TFF3Q07654 80 aa-2.58□□□□□ -2.82
PDE6C-202ENST00000475427 LINC00587B1AMM8 73 aa-2.59□□□□□ -2.82
PDE6C-202ENST00000475427 SERF2P84101 59 aa-2.59□□□□□ -2.82
PDE6C-202ENST00000475427 TDRG1Q3Y452 100 aa-2.59□□□□□ -2.82
PDE6C-202ENST00000475427 LINC01590Q5TEZ4 76 aa-2.59□□□□□ -2.82
PDE6C-202ENST00000475427 S100ZQ8WXG8 99 aa-2.59□□□□□ -2.82
PDE6C-202ENST00000475427 PEG3Q9GZU2 1588 aa-2.59□□□□□ -2.82
PDE6C-202ENST00000475427 C14orf144Q96I85 54 aa-2.6□□□□□ -2.83
PDE6C-202ENST00000475427 ABCA8O94911 1581 aa-2.61□□□□□ -2.83
PDE6C-202ENST00000475427 RB1CC1Q8TDY2 1594 aa-2.61□□□□□ -2.83
PDE6C-202ENST00000475427 ABCC1P33527 1531 aa-2.61□□□□□ -2.83
PDE6C-202ENST00000475427 IGIPA6NJ69 53 aa-2.61□□□□□ -2.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms