RNA–Protein interactions for RNA: ENST00000475401.1

TM9SF3-204, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 2

Gene TM9SF3, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-204ENST00000475401 ABRACLQ9P1F3 81 aa-0.17□□□□□ -2.44
TM9SF3-204ENST00000475401 MYO18BQ8IUG5 2567 aa-0.17□□□□□ -2.44
TM9SF3-204ENST00000475401 DNAH2Q9P225 4427 aa-0.18□□□□□ -2.44
TM9SF3-204ENST00000475401 MMP24-AS1A0A0U1RRL7 71 aa-0.18□□□□□ -2.44
TM9SF3-204ENST00000475401 SMIM27A0A1W2PRY6 76 aa-0.18□□□□□ -2.44
TM9SF3-204ENST00000475401 KAAG1Q9UBP8 84 aa-0.18□□□□□ -2.44
TM9SF3-204ENST00000475401 DNHD1Q96M86 4753 aa-0.18□□□□□ -2.44
TM9SF3-204ENST00000475401 USP9YO00507 2555 aaPredicted RBP-0.18□□□□□ -2.44
TM9SF3-204ENST00000475401 ABCA13Q86UQ4 5058 aa-0.18□□□□□ -2.44
TM9SF3-204ENST00000475401 MUC17Q685J3 4493 aa-0.19□□□□□ -2.44
TM9SF3-204ENST00000475401 VPS13DQ5THJ4 4388 aa-0.19□□□□□ -2.44
TM9SF3-204ENST00000475401 LAMA1P25391 3075 aa-0.19□□□□□ -2.44
TM9SF3-204ENST00000475401 ACACBO00763 2458 aa-0.2□□□□□ -2.44
TM9SF3-204ENST00000475401 DDX60Q8IY21 1712 aaKnown RBP-0.2□□□□□ -2.44
TM9SF3-204ENST00000475401 TNP1P09430 55 aa-0.2□□□□□ -2.44
TM9SF3-204ENST00000475401 MGAM2Q2M2H8 2515 aa-0.2□□□□□ -2.44
TM9SF3-204ENST00000475401 ITPR3Q14573 2671 aa-0.2□□□□□ -2.44
TM9SF3-204ENST00000475401 DNAH6Q9C0G6 4158 aa-0.21□□□□□ -2.44
TM9SF3-204ENST00000475401 SPENQ96T58 3664 aaKnown RBP-0.22□□□□□ -2.44
TM9SF3-204ENST00000475401 RIF1Q5UIP0 2472 aaKnown RBP-0.22□□□□□ -2.44
TM9SF3-204ENST00000475401 M0QY20 66 aa-0.22□□□□□ -2.44
TM9SF3-204ENST00000475401 PLECQ15149 4684 aaKnown RBP-0.22□□□□□ -2.45
TM9SF3-204ENST00000475401 A0A0C4DFX4 3053 aa-0.23□□□□□ -2.45
TM9SF3-204ENST00000475401 KRTAP20-2Q3LI61 65 aa-0.23□□□□□ -2.45
TM9SF3-204ENST00000475401 CLPSL2Q6UWE3 100 aa-0.23□□□□□ -2.45
TM9SF3-204ENST00000475401 WFDC10BQ8IUB3 73 aa-0.23□□□□□ -2.45
TM9SF3-204ENST00000475401 DYNC1H1Q14204 4646 aaKnown RBP-0.23□□□□□ -2.45
TM9SF3-204ENST00000475401 TRIOO75962 3097 aa-0.24□□□□□ -2.45
TM9SF3-204ENST00000475401 WDR87Q6ZQQ6 2873 aa-0.24□□□□□ -2.45
TM9SF3-204ENST00000475401 COL12A1Q99715 3063 aa-0.25□□□□□ -2.45
TM9SF3-204ENST00000475401 RANBP2P49792 3224 aaKnown RBP-0.25□□□□□ -2.45
TM9SF3-204ENST00000475401 TFF3Q07654 80 aa-0.25□□□□□ -2.45
TM9SF3-204ENST00000475401 DNAH11Q96DT5 4516 aa-0.25□□□□□ -2.45
TM9SF3-204ENST00000475401 TLN2Q9Y4G6 2542 aa-0.25□□□□□ -2.45
TM9SF3-204ENST00000475401 NFAT5O94916 1531 aa-0.26□□□□□ -2.45
TM9SF3-204ENST00000475401 A8MTW9 85 aa-0.26□□□□□ -2.45
TM9SF3-204ENST00000475401 M0QZ58 72 aa-0.26□□□□□ -2.45
TM9SF3-204ENST00000475401 DEFB1P60022 68 aa-0.26□□□□□ -2.45
TM9SF3-204ENST00000475401 TEX15Q9BXT5 2789 aa-0.26□□□□□ -2.45
TM9SF3-204ENST00000475401 COL6A5A8TX70 2615 aa-0.27□□□□□ -2.45
TM9SF3-204ENST00000475401 DNAH5Q8TE73 4624 aa-0.27□□□□□ -2.45
TM9SF3-204ENST00000475401 MT4P47944 62 aa-0.28□□□□□ -2.45
TM9SF3-204ENST00000475401 SMIM2Q9BVW6 85 aa-0.28□□□□□ -2.45
TM9SF3-204ENST00000475401 DNAH17Q9UFH2 4485 aa-0.28□□□□□ -2.45
TM9SF3-204ENST00000475401 USP9XQ93008 2570 aaPredicted RBP-0.28□□□□□ -2.45
TM9SF3-204ENST00000475401 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.29□□□□□ -2.46
TM9SF3-204ENST00000475401 DNAH1Q9P2D7 4330 aa-0.29□□□□□ -2.46
TM9SF3-204ENST00000475401 CMYA5Q8N3K9 4069 aa-0.29□□□□□ -2.46
TM9SF3-204ENST00000475401 NIPBLQ6KC79 2804 aaeCLIP-0.29□□□□□ -2.46
TM9SF3-204ENST00000475401 SPTBN5Q9NRC6 3674 aaKnown RBP-0.29□□□□□ -2.46
TM9SF3-204ENST00000475401 MT1HP80294 61 aa-0.3□□□□□ -2.46
TM9SF3-204ENST00000475401 KRTAP19-5Q3LI72 72 aa-0.3□□□□□ -2.46
TM9SF3-204ENST00000475401 RELNP78509 3460 aa-0.3□□□□□ -2.46
TM9SF3-204ENST00000475401 CELSR3Q9NYQ7 3312 aa-0.31□□□□□ -2.46
TM9SF3-204ENST00000475401 DNAH7Q8WXX0 4024 aa-0.31□□□□□ -2.46
TM9SF3-204ENST00000475401 SPART-AS1P0CW21 52 aa-0.31□□□□□ -2.46
TM9SF3-204ENST00000475401 KRTAP8-1Q8IUC2 63 aa-0.31□□□□□ -2.46
TM9SF3-204ENST00000475401 DNAH8Q96JB1 4490 aa-0.31□□□□□ -2.46
TM9SF3-204ENST00000475401 CEP295Q9C0D2 2601 aa-0.31□□□□□ -2.46
TM9SF3-204ENST00000475401 FRYQ5TBA9 3013 aa-0.32□□□□□ -2.46
TM9SF3-204ENST00000475401 SRCAPQ6ZRS2 3230 aa-0.32□□□□□ -2.46
TM9SF3-204ENST00000475401 LAMA2P24043 3122 aaKnown RBP-0.32□□□□□ -2.46
TM9SF3-204ENST00000475401 SMR3BP02814 79 aaPredicted RBP-0.32□□□□□ -2.46
TM9SF3-204ENST00000475401 DEFB131AP59861 70 aa-0.32□□□□□ -2.46
TM9SF3-204ENST00000475401 ITPR1Q14643 2758 aa-0.33□□□□□ -2.46
TM9SF3-204ENST00000475401 SPTAN1Q13813 2472 aaKnown RBP-0.33□□□□□ -2.46
TM9SF3-204ENST00000475401 IQGAP2Q13576 1575 aa-0.34□□□□□ -2.46
TM9SF3-204ENST00000475401 C5orf42Q9H799 3197 aa-0.34□□□□□ -2.46
TM9SF3-204ENST00000475401 LAMA3Q16787 3333 aa-0.35□□□□□ -2.46
TM9SF3-204ENST00000475401 ITPR2Q14571 2701 aa-0.35□□□□□ -2.46
TM9SF3-204ENST00000475401 ADGRG4Q8IZF6 3080 aa-0.35□□□□□ -2.47
TM9SF3-204ENST00000475401 DNAH10Q8IVF4 4471 aa-0.35□□□□□ -2.47
TM9SF3-204ENST00000475401 TRPM2O94759 1503 aa-0.35□□□□□ -2.47
TM9SF3-204ENST00000475401 CHD7Q9P2D1 2997 aa-0.36□□□□□ -2.47
TM9SF3-204ENST00000475401 SMG1Q96Q15 3661 aaKnown RBP-0.37□□□□□ -2.47
TM9SF3-204ENST00000475401 CFAP46Q8IYW2 2715 aa-0.37□□□□□ -2.47
TM9SF3-204ENST00000475401 POLR2KP53803 58 aaKnown RBP-0.37□□□□□ -2.47
TM9SF3-204ENST00000475401 LRBAP50851 2863 aa-0.37□□□□□ -2.47
TM9SF3-204ENST00000475401 CSMD1Q96PZ7 3565 aa-0.37□□□□□ -2.47
TM9SF3-204ENST00000475401 CLTCL1P53675 1640 aa-0.38□□□□□ -2.47
TM9SF3-204ENST00000475401 TRRAPQ9Y4A5 3859 aa-0.38□□□□□ -2.47
TM9SF3-204ENST00000475401 MGAQ8IWI9 3026 aa-0.39□□□□□ -2.47
TM9SF3-204ENST00000475401 MYO9AB2RTY4 2548 aa-0.39□□□□□ -2.47
TM9SF3-204ENST00000475401 MT1XP80297 61 aa-0.4□□□□□ -2.47
TM9SF3-204ENST00000475401 ZFHX4Q86UP3 3567 aa-0.41□□□□□ -2.47
TM9SF3-204ENST00000475401 MT1EP04732 61 aa-0.41□□□□□ -2.48
TM9SF3-204ENST00000475401 DMXL2Q8TDJ6 3036 aa-0.42□□□□□ -2.48
TM9SF3-204ENST00000475401 ATMQ13315 3056 aa-0.42□□□□□ -2.48
TM9SF3-204ENST00000475401 NDUFA1O15239 70 aa-0.43□□□□□ -2.48
TM9SF3-204ENST00000475401 MT1LQ93083 61 aa-0.44□□□□□ -2.48
TM9SF3-204ENST00000475401 LEAP2Q969E1 77 aa-0.44□□□□□ -2.48
TM9SF3-204ENST00000475401 EYSQ5T1H1 3165 aa-0.44□□□□□ -2.48
TM9SF3-204ENST00000475401 BOD1L1Q8NFC6 3051 aa-0.44□□□□□ -2.48
TM9SF3-204ENST00000475401 TOMM5Q8N4H5 51 aa-0.45□□□□□ -2.48
TM9SF3-204ENST00000475401 TLN1Q9Y490 2541 aaKnown RBP-0.45□□□□□ -2.48
TM9SF3-204ENST00000475401 MYO15AQ9UKN7 3530 aa-0.47□□□□□ -2.48
TM9SF3-204ENST00000475401 DMDP11532 3685 aa-0.48□□□□□ -2.49
TM9SF3-204ENST00000475401 CENPEQ02224 2701 aa-0.48□□□□□ -2.49
TM9SF3-204ENST00000475401 ATP7AQ04656 1500 aa-0.48□□□□□ -2.49
TM9SF3-204ENST00000475401 CRYBG3Q68DQ2 2970 aa-0.49□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms