RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 IGLV5-48A0A075B6I7 105 aa-1.76□□□□□ -2.69
ECHDC1-213ENST00000474240 SMIM13P0DJ93 91 aa-1.76□□□□□ -2.69
ECHDC1-213ENST00000474240 KCNQ1DNQ9H478 68 aa-1.76□□□□□ -2.69
ECHDC1-213ENST00000474240 NOP10Q9NPE3 64 aaKnown RBP-1.76□□□□□ -2.69
ECHDC1-213ENST00000474240 CEP250Q9BV73 2442 aa-1.77□□□□□ -2.69
ECHDC1-213ENST00000474240 TJP1Q07157 1748 aa-1.77□□□□□ -2.69
ECHDC1-213ENST00000474240 ADIRFQ15847 76 aa-1.78□□□□□ -2.69
ECHDC1-213ENST00000474240 INO80Q9ULG1 1556 aaPredicted RBP-1.78□□□□□ -2.69
ECHDC1-213ENST00000474240 CFAP47Q6ZTR5 3102 aa-1.78□□□□□ -2.69
ECHDC1-213ENST00000474240 RNF17Q9BXT8 1623 aaKnown RBP-1.79□□□□□ -2.7
ECHDC1-213ENST00000474240 CDC42BPAQ5VT25 1732 aa-1.8□□□□□ -2.7
ECHDC1-213ENST00000474240 ASXL1Q8IXJ9 1541 aa-1.8□□□□□ -2.7
ECHDC1-213ENST00000474240 ST20Q9HBF5 79 aa-1.81□□□□□ -2.7
ECHDC1-213ENST00000474240 LY75O60449 1722 aa-1.82□□□□□ -2.7
ECHDC1-213ENST00000474240 LRRIQ1Q96JM4 1722 aa-1.82□□□□□ -2.7
ECHDC1-213ENST00000474240 DEFB121Q5J5C9 76 aa-1.82□□□□□ -2.7
ECHDC1-213ENST00000474240 DNAH12Q6ZR08 3092 aa-1.82□□□□□ -2.7
ECHDC1-213ENST00000474240 S100A13Q99584 98 aa-1.83□□□□□ -2.7
ECHDC1-213ENST00000474240 ABCC1P33527 1531 aa-1.83□□□□□ -2.7
ECHDC1-213ENST00000474240 EIF2AK4Q9P2K8 1649 aaKnown RBP-1.84□□□□□ -2.7
ECHDC1-213ENST00000474240 RPS27P42677 84 aaKnown RBP-1.85□□□□□ -2.71
ECHDC1-213ENST00000474240 CRIP1P50238 77 aa-1.85□□□□□ -2.71
ECHDC1-213ENST00000474240 RPS27LQ71UM5 84 aaKnown RBP-1.85□□□□□ -2.71
ECHDC1-213ENST00000474240 C6orf48Q9UBA6 75 aa-1.85□□□□□ -2.71
ECHDC1-213ENST00000474240 NHSQ6T4R5 1651 aa-1.86□□□□□ -2.71
ECHDC1-213ENST00000474240 ETDCA0A1B0GVM5 59 aa-1.86□□□□□ -2.71
ECHDC1-213ENST00000474240 FCER1GP30273 86 aa-1.86□□□□□ -2.71
ECHDC1-213ENST00000474240 TDRG1Q3Y452 100 aa-1.87□□□□□ -2.71
ECHDC1-213ENST00000474240 PCNTO95613 3336 aa-1.88□□□□□ -2.71
ECHDC1-213ENST00000474240 H3BUT2 72 aa-1.88□□□□□ -2.71
ECHDC1-213ENST00000474240 LMTK2Q8IWU2 1503 aa-1.88□□□□□ -2.71
ECHDC1-213ENST00000474240 DCAF1Q9Y4B6 1507 aa-1.89□□□□□ -2.71
ECHDC1-213ENST00000474240 ENHOQ6UWT2 76 aa-1.89□□□□□ -2.71
ECHDC1-213ENST00000474240 MYO5CQ9NQX4 1742 aa-1.91□□□□□ -2.72
ECHDC1-213ENST00000474240 ANKARQ7Z5J8 1434 aa-1.92□□□□□ -2.72
ECHDC1-213ENST00000474240 MROH1Q8NDA8 1641 aa-1.94□□□□□ -2.72
ECHDC1-213ENST00000474240 SFTA3P0C7M3 94 aa-1.94□□□□□ -2.72
ECHDC1-213ENST00000474240 CFAP74Q9C0B2 1584 aa-1.94□□□□□ -2.72
ECHDC1-213ENST00000474240 LINC01546A6NGU7 62 aa-1.95□□□□□ -2.72
ECHDC1-213ENST00000474240 H3BVH4 76 aa-1.95□□□□□ -2.72
ECHDC1-213ENST00000474240 M0QY20 66 aa-1.95□□□□□ -2.72
ECHDC1-213ENST00000474240 DEFB114Q30KQ6 69 aa-1.96□□□□□ -2.72
ECHDC1-213ENST00000474240 DEFB136Q30KP8 78 aa-1.97□□□□□ -2.72
ECHDC1-213ENST00000474240 CENPFP49454 3210 aa-1.97□□□□□ -2.73
ECHDC1-213ENST00000474240 MAST1Q9Y2H9 1570 aa-1.98□□□□□ -2.73
ECHDC1-213ENST00000474240 BRCA2P51587 3418 aa-1.98□□□□□ -2.73
ECHDC1-213ENST00000474240 CD163L1Q9NR16 1453 aa-1.99□□□□□ -2.73
ECHDC1-213ENST00000474240 ABCC6O95255 1503 aa-1.99□□□□□ -2.73
ECHDC1-213ENST00000474240 NCBP2-AS2Q69YL0 99 aa-1.99□□□□□ -2.73
ECHDC1-213ENST00000474240 CDH23Q9H251 3354 aa-2□□□□□ -2.73
ECHDC1-213ENST00000474240 M0QZ58 72 aa-2□□□□□ -2.73
ECHDC1-213ENST00000474240 KRTAP19-2Q3LHN2 52 aa-2□□□□□ -2.73
ECHDC1-213ENST00000474240 TTTY10Q9BZA0 68 aa-2□□□□□ -2.73
ECHDC1-213ENST00000474240 C3P01024 1663 aa-2□□□□□ -2.73
ECHDC1-213ENST00000474240 CCDC18Q5T9S5 1454 aa-2.01□□□□□ -2.73
ECHDC1-213ENST00000474240 RB1CC1Q8TDY2 1594 aa-2.01□□□□□ -2.73
ECHDC1-213ENST00000474240 A8MTW9 85 aa-2.01□□□□□ -2.73
ECHDC1-213ENST00000474240 GNG2P59768 71 aa-2.01□□□□□ -2.73
ECHDC1-213ENST00000474240 ASPMQ8IZT6 3477 aa-2.01□□□□□ -2.73
ECHDC1-213ENST00000474240 ERVK-7P63135 1459 aa-2.01□□□□□ -2.73
ECHDC1-213ENST00000474240 DNMBPQ6XZF7 1577 aa-2.02□□□□□ -2.73
ECHDC1-213ENST00000474240 C18orf32Q8TCD1 76 aa-2.03□□□□□ -2.73
ECHDC1-213ENST00000474240 DIP2AQ14689 1571 aa-2.03□□□□□ -2.73
ECHDC1-213ENST00000474240 A0A1B0GUL6 1792 aa-2.03□□□□□ -2.73
ECHDC1-213ENST00000474240 ABRACLQ9P1F3 81 aa-2.05□□□□□ -2.74
ECHDC1-213ENST00000474240 CLASP1Q7Z460 1538 aa-2.06□□□□□ -2.74
ECHDC1-213ENST00000474240 ATXN8Q156A1 80 aa-2.06□□□□□ -2.74
ECHDC1-213ENST00000474240 MADDQ8WXG6 1647 aa-2.07□□□□□ -2.74
ECHDC1-213ENST00000474240 SPART-AS1P0CW21 52 aa-2.08□□□□□ -2.74
ECHDC1-213ENST00000474240 SMARCA2P51531 1590 aa-2.08□□□□□ -2.74
ECHDC1-213ENST00000474240 VPS13AQ96RL7 3174 aa-2.08□□□□□ -2.74
ECHDC1-213ENST00000474240 MED14O60244 1454 aa-2.09□□□□□ -2.74
ECHDC1-213ENST00000474240 GNG13Q9P2W3 67 aa-2.12□□□□□ -2.75
ECHDC1-213ENST00000474240 LEAP2Q969E1 77 aa-2.13□□□□□ -2.75
ECHDC1-213ENST00000474240 ABCA8O94911 1581 aa-2.14□□□□□ -2.75
ECHDC1-213ENST00000474240 UTRNP46939 3433 aa-2.14□□□□□ -2.75
ECHDC1-213ENST00000474240 RRBP1Q9P2E9 1410 aaKnown RBP-2.15□□□□□ -2.75
ECHDC1-213ENST00000474240 K7EMI3 77 aa-2.15□□□□□ -2.75
ECHDC1-213ENST00000474240 PREX2Q70Z35 1606 aa-2.16□□□□□ -2.75
ECHDC1-213ENST00000474240 TIAM1Q13009 1591 aa-2.16□□□□□ -2.76
ECHDC1-213ENST00000474240 FAM208AQ9UK61 1670 aaKnown RBP-2.21□□□□□ -2.76
ECHDC1-213ENST00000474240 KAAG1Q9UBP8 84 aa-2.21□□□□□ -2.76
ECHDC1-213ENST00000474240 GLI2P10070 1586 aa-2.22□□□□□ -2.76
ECHDC1-213ENST00000474240 TMEM167BQ9NRX6 74 aa-2.22□□□□□ -2.76
ECHDC1-213ENST00000474240 HILPDAQ9Y5L2 63 aa-2.22□□□□□ -2.76
ECHDC1-213ENST00000474240 CROCC2H7BZ55 1655 aa-2.22□□□□□ -2.77
ECHDC1-213ENST00000474240 XIRP2A4UGR9 3374 aa-2.23□□□□□ -2.77
ECHDC1-213ENST00000474240 SMIM27A0A1W2PRY6 76 aa-2.24□□□□□ -2.77
ECHDC1-213ENST00000474240 SERF2P84101 59 aa-2.24□□□□□ -2.77
ECHDC1-213ENST00000474240 GOLGB1Q14789 3259 aaKnown RBP-2.24□□□□□ -2.77
ECHDC1-213ENST00000474240 DEFB104AQ8WTQ1 72 aa-2.25□□□□□ -2.77
ECHDC1-213ENST00000474240 KIF21BO75037 1637 aa-2.25□□□□□ -2.77
ECHDC1-213ENST00000474240 ABCA9Q8IUA7 1624 aa-2.27□□□□□ -2.77
ECHDC1-213ENST00000474240 DUOX2Q9NRD8 1548 aa-2.3□□□□□ -2.78
ECHDC1-213ENST00000474240 EEA1Q15075 1411 aa-2.3□□□□□ -2.78
ECHDC1-213ENST00000474240 ALS2Q96Q42 1657 aa-2.31□□□□□ -2.78
ECHDC1-213ENST00000474240 NRXN3Q9Y4C0 1643 aa-2.31□□□□□ -2.78
ECHDC1-213ENST00000474240 LINC01549A6NIU2 74 aa-2.32□□□□□ -2.78
ECHDC1-213ENST00000474240 M0R1W7 72 aa-2.33□□□□□ -2.78
ECHDC1-213ENST00000474240 LINC00308Q8TCZ7 52 aa-2.33□□□□□ -2.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms