RNA–Protein interactions for RNA: ENST00000473171.5

LSAMP-202, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-202ENST00000473171 Q5W150 140 aa3.28□□□□□ -1.88
LSAMP-202ENST00000473171 LCA10Q71F78 164 aa3.28□□□□□ -1.88
LSAMP-202ENST00000473171 TMEM254Q8TBM7 123 aa3.28□□□□□ -1.88
LSAMP-202ENST00000473171 C14orf144Q96I85 54 aa3.28□□□□□ -1.88
LSAMP-202ENST00000473171 PRR15Q8IV56 129 aa3.27□□□□□ -1.89
LSAMP-202ENST00000473171 CEND1Q8N111 149 aa3.27□□□□□ -1.89
LSAMP-202ENST00000473171 HIST1H2BLQ99880 126 aa3.27□□□□□ -1.89
LSAMP-202ENST00000473171 C9JAW5 83 aa3.26□□□□□ -1.89
LSAMP-202ENST00000473171 FXYD2P54710 66 aa3.26□□□□□ -1.89
LSAMP-202ENST00000473171 HIST3H2BBQ8N257 126 aa3.26□□□□□ -1.89
LSAMP-202ENST00000473171 hDV103S1A0JD37 113 aa3.25□□□□□ -1.89
LSAMP-202ENST00000473171 K7ERJ3 54 aa3.25□□□□□ -1.89
LSAMP-202ENST00000473171 DLEU1O43261 78 aa3.25□□□□□ -1.89
LSAMP-202ENST00000473171 S100A2P29034 98 aa3.25□□□□□ -1.89
LSAMP-202ENST00000473171 MT1XP80297 61 aa3.24□□□□□ -1.89
LSAMP-202ENST00000473171 HIGD1BQ9P298 99 aa3.24□□□□□ -1.89
LSAMP-202ENST00000473171 K7EQZ3 153 aa3.23□□□□□ -1.89
LSAMP-202ENST00000473171 PRO2289Q9P1D8 64 aa3.23□□□□□ -1.89
LSAMP-202ENST00000473171 COX6CP09669 75 aa3.22□□□□□ -1.89
LSAMP-202ENST00000473171 LCE3AQ5TA76 89 aa3.22□□□□□ -1.89
LSAMP-202ENST00000473171 SPATA45Q537H7 98 aa3.2□□□□□ -1.9
LSAMP-202ENST00000473171 C1orf64Q8NEQ6 169 aa3.2□□□□□ -1.9
LSAMP-202ENST00000473171 CRIPTQ9P021 101 aa3.2□□□□□ -1.9
LSAMP-202ENST00000473171 BAALC-AS2P0C853 105 aa3.19□□□□□ -1.9
LSAMP-202ENST00000473171 HCG22E2RYF7 251 aa3.18□□□□□ -1.9
LSAMP-202ENST00000473171 NREPQ16612 68 aa3.18□□□□□ -1.9
LSAMP-202ENST00000473171 PRO0461Q9UI25 63 aa3.18□□□□□ -1.9
LSAMP-202ENST00000473171 SCGB1C2P0DMR2 95 aa3.17□□□□□ -1.9
LSAMP-202ENST00000473171 OCR1Q9BZK8 76 aa3.17□□□□□ -1.9
LSAMP-202ENST00000473171 LOC110117498A0A087WWA1 95 aa3.16□□□□□ -1.9
LSAMP-202ENST00000473171 C14orf132Q9NPU4 83 aa3.16□□□□□ -1.9
LSAMP-202ENST00000473171 A0A1B0GW54 56 aa3.15□□□□□ -1.91
LSAMP-202ENST00000473171 A0A087WVE0 104 aa3.14□□□□□ -1.91
LSAMP-202ENST00000473171 CASC2Q6XLA1 102 aa3.14□□□□□ -1.91
LSAMP-202ENST00000473171 Q8N9L7 120 aa3.14□□□□□ -1.91
LSAMP-202ENST00000473171 VAMP8Q9BV40 100 aa3.14□□□□□ -1.91
LSAMP-202ENST00000473171 JMJD7-PLA2G4BH0Y9G9 81 aa3.13□□□□□ -1.91
LSAMP-202ENST00000473171 S100A6P06703 90 aa3.13□□□□□ -1.91
LSAMP-202ENST00000473171 HSD52Q0P140 79 aa3.13□□□□□ -1.91
LSAMP-202ENST00000473171 DSTQ03001 7570 aaKnown RBP3.12□□□□□ -1.91
LSAMP-202ENST00000473171 A8MUN3 132 aa3.12□□□□□ -1.91
LSAMP-202ENST00000473171 CXCL6P80162 114 aa3.12□□□□□ -1.91
LSAMP-202ENST00000473171 PLAC4Q8WY50 150 aa3.12□□□□□ -1.91
LSAMP-202ENST00000473171 PDE6GP18545 87 aa3.11□□□□□ -1.91
LSAMP-202ENST00000473171 BPY2O14599 106 aa3.1□□□□□ -1.91
LSAMP-202ENST00000473171 ATXN8Q156A1 80 aa3.09□□□□□ -1.91
LSAMP-202ENST00000473171 S100A1P23297 94 aa3.08□□□□□ -1.92
LSAMP-202ENST00000473171 ADM2Q7Z4H4 148 aa3.07□□□□□ -1.92
LSAMP-202ENST00000473171 NAA38Q9BRA0 125 aaKnown RBP3.06□□□□□ -1.92
LSAMP-202ENST00000473171 H0YAA0 97 aa3.04□□□□□ -1.92
LSAMP-202ENST00000473171 K7EP34 96 aa3.02□□□□□ -1.93
LSAMP-202ENST00000473171 NDUFC1O43677 76 aa3.02□□□□□ -1.93
LSAMP-202ENST00000473171 KRTAP5-8O75690 187 aa3.01□□□□□ -1.93
LSAMP-202ENST00000473171 MT4P47944 62 aa3□□□□□ -1.93
LSAMP-202ENST00000473171 R4GN34 69 aa3□□□□□ -1.93
LSAMP-202ENST00000473171 LINC01554Q52M75 96 aa2.99□□□□□ -1.93
LSAMP-202ENST00000473171 HMCN1Q96RW7 5635 aa2.98□□□□□ -1.93
LSAMP-202ENST00000473171 M0QZ58 72 aa2.98□□□□□ -1.93
LSAMP-202ENST00000473171 KRTAP5-10Q6L8G5 202 aa2.98□□□□□ -1.93
LSAMP-202ENST00000473171 CYP4F30PQ9H0H9 118 aa2.98□□□□□ -1.93
LSAMP-202ENST00000473171 AHNAK2Q8IVF2 5795 aa2.97□□□□□ -1.93
LSAMP-202ENST00000473171 UQCR10Q9UDW1 63 aa2.97□□□□□ -1.93
LSAMP-202ENST00000473171 P0C880 135 aa2.96□□□□□ -1.94
LSAMP-202ENST00000473171 PYY3Q5JQD4 70 aa2.96□□□□□ -1.94
LSAMP-202ENST00000473171 TP53AIP1Q9HCN2 124 aa2.95□□□□□ -1.94
LSAMP-202ENST00000473171 TSTD3H0UI37 97 aa2.94□□□□□ -1.94
LSAMP-202ENST00000473171 KRTAP19-3Q7Z4W3 81 aa2.92□□□□□ -1.94
LSAMP-202ENST00000473171 H3BT86 120 aa2.9□□□□□ -1.95
LSAMP-202ENST00000473171 KRTAP5-7Q6L8G8 165 aa2.9□□□□□ -1.95
LSAMP-202ENST00000473171 CYSTM1Q9H1C7 97 aa2.9□□□□□ -1.95
LSAMP-202ENST00000473171 LOC101927531A0A1B0GV80 90 aa2.89□□□□□ -1.95
LSAMP-202ENST00000473171 MT1EP04732 61 aa2.89□□□□□ -1.95
LSAMP-202ENST00000473171 ACYP1P07311 99 aa2.89□□□□□ -1.95
LSAMP-202ENST00000473171 KRTAP19-7Q3SYF9 63 aa2.89□□□□□ -1.95
LSAMP-202ENST00000473171 KRTAP5-5Q701N2 237 aaPredicted RBP2.89□□□□□ -1.95
LSAMP-202ENST00000473171 C20orf197Q8N268 126 aa2.89□□□□□ -1.95
LSAMP-202ENST00000473171 UBL5Q9BZL1 73 aa2.89□□□□□ -1.95
LSAMP-202ENST00000473171 TRAV22A0A0B4J277 110 aa2.88□□□□□ -1.95
LSAMP-202ENST00000473171 SPRR5A0A1B0GTR4 108 aa2.87□□□□□ -1.95
LSAMP-202ENST00000473171 M0R143 59 aa2.87□□□□□ -1.95
LSAMP-202ENST00000473171 BATFQ16520 125 aa2.87□□□□□ -1.95
LSAMP-202ENST00000473171 SPCS1Q9Y6A9 102 aa2.87□□□□□ -1.95
LSAMP-202ENST00000473171 MT-ATP8P03928 68 aa2.83□□□□□ -1.96
LSAMP-202ENST00000473171 H0Y9P7 68 aa2.81□□□□□ -1.96
LSAMP-202ENST00000473171 A0A1W2PPM0 123 aa2.79□□□□□ -1.96
LSAMP-202ENST00000473171 MT1GP13640 62 aa2.79□□□□□ -1.96
LSAMP-202ENST00000473171 LCE1CQ5T751 118 aa2.77□□□□□ -1.97
LSAMP-202ENST00000473171 LCE1BQ5T7P3 118 aa2.77□□□□□ -1.97
LSAMP-202ENST00000473171 PP632Q6XCG6 107 aa2.77□□□□□ -1.97
LSAMP-202ENST00000473171 MT1MQ8N339 61 aa2.77□□□□□ -1.97
LSAMP-202ENST00000473171 ATOX1O00244 68 aa2.76□□□□□ -1.97
LSAMP-202ENST00000473171 UQCRQO14949 82 aa2.75□□□□□ -1.97
LSAMP-202ENST00000473171 KRTAP19-5Q3LI72 72 aa2.75□□□□□ -1.97
LSAMP-202ENST00000473171 TAX1BP3O14907 124 aa2.74□□□□□ -1.97
LSAMP-202ENST00000473171 LINC00208Q96KT6 92 aa2.73□□□□□ -1.97
LSAMP-202ENST00000473171 CAMK2N1Q7Z7J9 78 aa2.72□□□□□ -1.97
LSAMP-202ENST00000473171 MT1LQ93083 61 aa2.71□□□□□ -1.98
LSAMP-202ENST00000473171 LCE3DQ9BYE3 92 aa2.71□□□□□ -1.98
LSAMP-202ENST00000473171 KRTAP20-2Q3LI61 65 aa2.7□□□□□ -1.98
LSAMP-202ENST00000473171 A0A0D9SG42 100 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms