RNA–Protein interactions for RNA: ENST00000472564.1

LAMP1-203, Transcript of lysosomal associated membrane protein 1, humanhuman

TSL 2

Gene LAMP1, Length 5,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-203ENST00000472564 AKAP9Q99996 3911 aa7.41□□□□□ -1.22
LAMP1-203ENST00000472564 INE1O15225 51 aa7.39□□□□□ -1.23
LAMP1-203ENST00000472564 KRTAP23-1A1A580 65 aa7.38□□□□□ -1.23
LAMP1-203ENST00000472564 DNAH11Q96DT5 4516 aa7.38□□□□□ -1.23
LAMP1-203ENST00000472564 DNAH1Q9P2D7 4330 aa7.36□□□□□ -1.23
LAMP1-203ENST00000472564 KRTAP12-3P60328 96 aa7.35□□□□□ -1.23
LAMP1-203ENST00000472564 PLECQ15149 4684 aaKnown RBP7.35□□□□□ -1.23
LAMP1-203ENST00000472564 DNAH10Q8IVF4 4471 aa7.31□□□□□ -1.24
LAMP1-203ENST00000472564 LCE3AQ5TA76 89 aa7.31□□□□□ -1.24
LAMP1-203ENST00000472564 ALMS1Q8TCU4 4167 aa7.26□□□□□ -1.25
LAMP1-203ENST00000472564 DNHD1Q96M86 4753 aa7.22□□□□□ -1.25
LAMP1-203ENST00000472564 FAT1Q14517 4588 aa7.17□□□□□ -1.26
LAMP1-203ENST00000472564 DNAH17Q9UFH2 4485 aa7.16□□□□□ -1.26
LAMP1-203ENST00000472564 VPS13DQ5THJ4 4388 aa7.16□□□□□ -1.26
LAMP1-203ENST00000472564 KRTAP4-1Q9BYQ7 146 aa7.13□□□□□ -1.27
LAMP1-203ENST00000472564 CRCT1Q9UGL9 99 aa7.13□□□□□ -1.27
LAMP1-203ENST00000472564 DNAH8Q96JB1 4490 aa7.12□□□□□ -1.27
LAMP1-203ENST00000472564 DYNC1H1Q14204 4646 aaKnown RBP7.09□□□□□ -1.27
LAMP1-203ENST00000472564 DNAH2Q9P225 4427 aa7.07□□□□□ -1.28
LAMP1-203ENST00000472564 LRP1BQ9NZR2 4599 aa7.04□□□□□ -1.28
LAMP1-203ENST00000472564 STARD9Q9P2P6 4700 aa7.01□□□□□ -1.29
LAMP1-203ENST00000472564 RYR1P21817 5038 aa6.98□□□□□ -1.29
LAMP1-203ENST00000472564 SACSQ9NZJ4 4579 aa6.92□□□□□ -1.3
LAMP1-203ENST00000472564 SPRR2GQ9BYE4 73 aa6.87□□□□□ -1.31
LAMP1-203ENST00000472564 MT1HP80294 61 aa6.85□□□□□ -1.31
LAMP1-203ENST00000472564 MT2AP02795 61 aa6.83□□□□□ -1.32
LAMP1-203ENST00000472564 MYCBP2O75592 4640 aa6.82□□□□□ -1.32
LAMP1-203ENST00000472564 DYNC2H1Q8NCM8 4307 aaKnown RBP6.82□□□□□ -1.32
LAMP1-203ENST00000472564 APOBP04114 4563 aaKnown RBP6.81□□□□□ -1.32
LAMP1-203ENST00000472564 DNAH3Q8TD57 4116 aa6.79□□□□□ -1.32
LAMP1-203ENST00000472564 PRKDCP78527 4128 aaKnown RBP6.79□□□□□ -1.32
LAMP1-203ENST00000472564 ANK2Q01484 3957 aa6.79□□□□□ -1.32
LAMP1-203ENST00000472564 FAT2Q9NYQ8 4349 aa6.78□□□□□ -1.32
LAMP1-203ENST00000472564 KRTAP8-1Q8IUC2 63 aa6.75□□□□□ -1.33
LAMP1-203ENST00000472564 KMT2AQ03164 3969 aa6.73□□□□□ -1.33
LAMP1-203ENST00000472564 LYSTQ99698 3801 aa6.72□□□□□ -1.33
LAMP1-203ENST00000472564 KRTAP10-5P60370 271 aa6.71□□□□□ -1.33
LAMP1-203ENST00000472564 MT1FP04733 61 aa6.71□□□□□ -1.34
LAMP1-203ENST00000472564 VPS13BQ7Z7G8 4022 aa6.71□□□□□ -1.34
LAMP1-203ENST00000472564 KIAA1109Q2LD37 5005 aa6.7□□□□□ -1.34
LAMP1-203ENST00000472564 KRTAP19-5Q3LI72 72 aa6.54□□□□□ -1.36
LAMP1-203ENST00000472564 RYR3Q15413 4870 aa6.54□□□□□ -1.36
LAMP1-203ENST00000472564 LRP1Q07954 4544 aaKnown RBP6.53□□□□□ -1.36
LAMP1-203ENST00000472564 KRTAP17-1Q9BYP8 105 aa6.52□□□□□ -1.37
LAMP1-203ENST00000472564 FAT3Q8TDW7 4589 aa6.51□□□□□ -1.37
LAMP1-203ENST00000472564 KRTAP19-1Q8IUB9 90 aa6.49□□□□□ -1.37
LAMP1-203ENST00000472564 FRAS1Q86XX4 4008 aa6.47□□□□□ -1.37
LAMP1-203ENST00000472564 LCE3CQ5T5A8 94 aa6.47□□□□□ -1.37
LAMP1-203ENST00000472564 CMYA5Q8N3K9 4069 aa6.42□□□□□ -1.38
LAMP1-203ENST00000472564 DNAH6Q9C0G6 4158 aa6.41□□□□□ -1.38
LAMP1-203ENST00000472564 KRTAP19-8Q3LI54 63 aa6.39□□□□□ -1.39
LAMP1-203ENST00000472564 RYR2Q92736 4967 aa6.37□□□□□ -1.39
LAMP1-203ENST00000472564 HECTD4Q9Y4D8 3996 aa6.35□□□□□ -1.39
LAMP1-203ENST00000472564 KRTAP10-7P60409 375 aaPredicted RBP6.34□□□□□ -1.39
LAMP1-203ENST00000472564 LRP2P98164 4655 aa6.3□□□□□ -1.4
LAMP1-203ENST00000472564 KRTAP19-4Q3LI73 84 aa6.27□□□□□ -1.41
LAMP1-203ENST00000472564 SPRR2FQ96RM1 72 aa6.26□□□□□ -1.41
LAMP1-203ENST00000472564 DNAH7Q8WXX0 4024 aa6.25□□□□□ -1.41
LAMP1-203ENST00000472564 MT1XP80297 61 aa6.25□□□□□ -1.41
LAMP1-203ENST00000472564 HERC2O95714 4834 aa6.21□□□□□ -1.42
LAMP1-203ENST00000472564 MT1BP07438 61 aa6.2□□□□□ -1.42
LAMP1-203ENST00000472564 SPRR5A0A1B0GTR4 108 aa6.17□□□□□ -1.42
LAMP1-203ENST00000472564 KRTAP9-8Q9BYQ0 159 aa6.16□□□□□ -1.42
LAMP1-203ENST00000472564 HYDINQ4G0P3 5121 aa6.12□□□□□ -1.43
LAMP1-203ENST00000472564 LCE2CQ5TA81 110 aa6.1□□□□□ -1.43
LAMP1-203ENST00000472564 PKHD1P08F94 4074 aa6.08□□□□□ -1.44
LAMP1-203ENST00000472564 PKD1P98161 4303 aa6.08□□□□□ -1.44
LAMP1-203ENST00000472564 HSPG2P98160 4391 aa6.02□□□□□ -1.45
LAMP1-203ENST00000472564 PCLOQ9Y6V0 5065 aa6□□□□□ -1.45
LAMP1-203ENST00000472564 KRTAP4-8A0A0G2JLE6 195 aa6□□□□□ -1.45
LAMP1-203ENST00000472564 KRTAP4-8Q9BYQ9 185 aa6□□□□□ -1.45
LAMP1-203ENST00000472564 KRTAP9-3Q9BYQ3 159 aa5.98□□□□□ -1.45
LAMP1-203ENST00000472564 KMT2CQ8NEZ4 4911 aaKnown RBP5.95□□□□□ -1.46
LAMP1-203ENST00000472564 HERC1Q15751 4861 aa5.91□□□□□ -1.46
LAMP1-203ENST00000472564 MT1GP13640 62 aa5.91□□□□□ -1.46
LAMP1-203ENST00000472564 LPAP08519 4548 aa5.9□□□□□ -1.46
LAMP1-203ENST00000472564 LCE3BQ5TA77 95 aa5.89□□□□□ -1.47
LAMP1-203ENST00000472564 KRTAP12-4P60329 112 aa5.89□□□□□ -1.47
LAMP1-203ENST00000472564 KRTAP19-2Q3LHN2 52 aa5.88□□□□□ -1.47
LAMP1-203ENST00000472564 BIRC6Q9NR09 4857 aa5.85□□□□□ -1.47
LAMP1-203ENST00000472564 MUC17Q685J3 4493 aa5.83□□□□□ -1.48
LAMP1-203ENST00000472564 SPRR2EP22531 72 aa5.75□□□□□ -1.49
LAMP1-203ENST00000472564 SPRR2BP35325 72 aa5.75□□□□□ -1.49
LAMP1-203ENST00000472564 SPRR2AP35326 72 aa5.75□□□□□ -1.49
LAMP1-203ENST00000472564 SYNE1Q8NF91 8797 aaKnown RBP5.72□□□□□ -1.49
LAMP1-203ENST00000472564 LCE2BO14633 110 aa5.71□□□□□ -1.5
LAMP1-203ENST00000472564 KRTAP4-7Q9BYR0 210 aa5.71□□□□□ -1.5
LAMP1-203ENST00000472564 EPPK1P58107 5090 aaKnown RBP5.7□□□□□ -1.5
LAMP1-203ENST00000472564 ABCA13Q86UQ4 5058 aa5.69□□□□□ -1.5
LAMP1-203ENST00000472564 FLGP20930 4061 aaPredicted RBP5.69□□□□□ -1.5
LAMP1-203ENST00000472564 TNXBP22105 4242 aa5.67□□□□□ -1.5
LAMP1-203ENST00000472564 PKHD1L1Q86WI1 4243 aa5.66□□□□□ -1.5
LAMP1-203ENST00000472564 MT1LQ93083 61 aa5.65□□□□□ -1.5
LAMP1-203ENST00000472564 LCE3DQ9BYE3 92 aa5.61□□□□□ -1.51
LAMP1-203ENST00000472564 MT1EP04732 61 aa5.6□□□□□ -1.51
LAMP1-203ENST00000472564 KRTAP19-3Q7Z4W3 81 aa5.6□□□□□ -1.51
LAMP1-203ENST00000472564 UBR4Q5T4S7 5183 aa5.57□□□□□ -1.52
LAMP1-203ENST00000472564 SPRR2DP22532 72 aa5.54□□□□□ -1.52
LAMP1-203ENST00000472564 LCE3EQ5T5B0 92 aa5.53□□□□□ -1.52
LAMP1-203ENST00000472564 FAT4Q6V0I7 4981 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms