RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 ASXL1Q8IXJ9 1541 aa-4.31□□□□□ -3.1
PRPF40A-207ENST00000471701 CD163L1Q9NR16 1453 aa-4.31□□□□□ -3.1
PRPF40A-207ENST00000471701 CFAP54Q96N23 3096 aa-4.32□□□□□ -3.1
PRPF40A-207ENST00000471701 SPART-AS1P0CW21 52 aa-4.33□□□□□ -3.1
PRPF40A-207ENST00000471701 DEFB121Q5J5C9 76 aa-4.33□□□□□ -3.1
PRPF40A-207ENST00000471701 ENHOQ6UWT2 76 aa-4.34□□□□□ -3.1
PRPF40A-207ENST00000471701 TDRG1Q3Y452 100 aa-4.36□□□□□ -3.11
PRPF40A-207ENST00000471701 Q9H521 79 aa-4.36□□□□□ -3.11
PRPF40A-207ENST00000471701 MED14O60244 1454 aa-4.37□□□□□ -3.11
PRPF40A-207ENST00000471701 MYO15AQ9UKN7 3530 aa-4.37□□□□□ -3.11
PRPF40A-207ENST00000471701 S100A8P05109 93 aa-4.37□□□□□ -3.11
PRPF40A-207ENST00000471701 VPS13CQ709C8 3753 aa-4.4□□□□□ -3.11
PRPF40A-207ENST00000471701 A8MTW9 85 aa-4.4□□□□□ -3.11
PRPF40A-207ENST00000471701 PEG3Q9GZU2 1588 aa-4.41□□□□□ -3.12
PRPF40A-207ENST00000471701 V9GYS6 101 aa-4.43□□□□□ -3.12
PRPF40A-207ENST00000471701 LMTK2Q8IWU2 1503 aa-4.43□□□□□ -3.12
PRPF40A-207ENST00000471701 ABCC6O95255 1503 aa-4.44□□□□□ -3.12
PRPF40A-207ENST00000471701 CLASP1Q7Z460 1538 aa-4.45□□□□□ -3.12
PRPF40A-207ENST00000471701 DNMBPQ6XZF7 1577 aa-4.45□□□□□ -3.12
PRPF40A-207ENST00000471701 MROH1Q8NDA8 1641 aa-4.47□□□□□ -3.13
PRPF40A-207ENST00000471701 C3P01024 1663 aa-4.48□□□□□ -3.13
PRPF40A-207ENST00000471701 DIP2AQ14689 1571 aa-4.48□□□□□ -3.13
PRPF40A-207ENST00000471701 UACAQ9BZF9 1416 aa-4.5□□□□□ -3.13
PRPF40A-207ENST00000471701 H3BUT2 72 aa-4.52□□□□□ -3.13
PRPF40A-207ENST00000471701 DEFB114Q30KQ6 69 aa-4.54□□□□□ -3.14
PRPF40A-207ENST00000471701 ST20Q9HBF5 79 aa-4.54□□□□□ -3.14
PRPF40A-207ENST00000471701 FAM208AQ9UK61 1670 aaKnown RBP-4.56□□□□□ -3.14
PRPF40A-207ENST00000471701 PREX2Q70Z35 1606 aa-4.57□□□□□ -3.14
PRPF40A-207ENST00000471701 ABCC1P33527 1531 aa-4.59□□□□□ -3.14
PRPF40A-207ENST00000471701 ADIRFQ15847 76 aa-4.59□□□□□ -3.14
PRPF40A-207ENST00000471701 WDFY3Q8IZQ1 3526 aa-4.59□□□□□ -3.14
PRPF40A-207ENST00000471701 KAAG1Q9UBP8 84 aa-4.6□□□□□ -3.15
PRPF40A-207ENST00000471701 LEAP2Q969E1 77 aa-4.61□□□□□ -3.15
PRPF40A-207ENST00000471701 H3BVH4 76 aa-4.62□□□□□ -3.15
PRPF40A-207ENST00000471701 KIF21BO75037 1637 aa-4.64□□□□□ -3.15
PRPF40A-207ENST00000471701 DCAF1Q9Y4B6 1507 aa-4.64□□□□□ -3.15
PRPF40A-207ENST00000471701 CROCC2H7BZ55 1655 aa-4.64□□□□□ -3.15
PRPF40A-207ENST00000471701 ABRACLQ9P1F3 81 aa-4.65□□□□□ -3.15
PRPF40A-207ENST00000471701 GLI2P10070 1586 aa-4.66□□□□□ -3.16
PRPF40A-207ENST00000471701 TIAM1Q13009 1591 aa-4.66□□□□□ -3.16
PRPF40A-207ENST00000471701 DEFB136Q30KP8 78 aa-4.67□□□□□ -3.16
PRPF40A-207ENST00000471701 CFAP74Q9C0B2 1584 aa-4.67□□□□□ -3.16
PRPF40A-207ENST00000471701 MADDQ8WXG6 1647 aa-4.68□□□□□ -3.16
PRPF40A-207ENST00000471701 RRBP1Q9P2E9 1410 aaKnown RBP-4.7□□□□□ -3.16
PRPF40A-207ENST00000471701 RPS29P62273 56 aaKnown RBP-4.7□□□□□ -3.16
PRPF40A-207ENST00000471701 SPEGQ15772 3267 aa-4.71□□□□□ -3.16
PRPF40A-207ENST00000471701 ANKARQ7Z5J8 1434 aa-4.73□□□□□ -3.17
PRPF40A-207ENST00000471701 FRYLO94915 3013 aa-4.75□□□□□ -3.17
PRPF40A-207ENST00000471701 S100A13Q99584 98 aa-4.75□□□□□ -3.17
PRPF40A-207ENST00000471701 MT1FP04733 61 aa-4.78□□□□□ -3.17
PRPF40A-207ENST00000471701 C18orf32Q8TCD1 76 aa-4.78□□□□□ -3.17
PRPF40A-207ENST00000471701 PCNTO95613 3336 aa-4.79□□□□□ -3.18
PRPF40A-207ENST00000471701 DMDP11532 3685 aa-4.79□□□□□ -3.18
PRPF40A-207ENST00000471701 ATXN8Q156A1 80 aa-4.83□□□□□ -3.18
PRPF40A-207ENST00000471701 SMIM27A0A1W2PRY6 76 aa-4.84□□□□□ -3.18
PRPF40A-207ENST00000471701 WFDC10BQ8IUB3 73 aa-4.87□□□□□ -3.19
PRPF40A-207ENST00000471701 ABCA8O94911 1581 aa-4.88□□□□□ -3.19
PRPF40A-207ENST00000471701 SZT2Q5T011 3432 aa-4.89□□□□□ -3.19
PRPF40A-207ENST00000471701 ALS2Q96Q42 1657 aa-4.91□□□□□ -3.2
PRPF40A-207ENST00000471701 HILPDAQ9Y5L2 63 aa-4.91□□□□□ -3.2
PRPF40A-207ENST00000471701 KRTAP19-6Q3LI70 58 aa-4.92□□□□□ -3.2
PRPF40A-207ENST00000471701 LINC00308Q8TCZ7 52 aa-4.92□□□□□ -3.2
PRPF40A-207ENST00000471701 K7EMI3 77 aa-4.94□□□□□ -3.2
PRPF40A-207ENST00000471701 POLR2KP53803 58 aaKnown RBP-4.95□□□□□ -3.2
PRPF40A-207ENST00000471701 TMEM167BQ9NRX6 74 aa-4.96□□□□□ -3.2
PRPF40A-207ENST00000471701 CEP350Q5VT06 3117 aa-4.97□□□□□ -3.2
PRPF40A-207ENST00000471701 ABCA9Q8IUA7 1624 aa-4.97□□□□□ -3.21
PRPF40A-207ENST00000471701 M0R1W7 72 aa-5□□□□□ -3.21
PRPF40A-207ENST00000471701 GNG13Q9P2W3 67 aa-5.01□□□□□ -3.21
PRPF40A-207ENST00000471701 EFCAB6Q5THR3 1501 aa-5.05□□□□□ -3.22
PRPF40A-207ENST00000471701 EEA1Q15075 1411 aa-5.07□□□□□ -3.22
PRPF40A-207ENST00000471701 LINC01549A6NIU2 74 aa-5.09□□□□□ -3.22
PRPF40A-207ENST00000471701 CCDC18Q5T9S5 1454 aa-5.1□□□□□ -3.23
PRPF40A-207ENST00000471701 IQGAP3Q86VI3 1631 aa-5.11□□□□□ -3.23
PRPF40A-207ENST00000471701 GNG2P59768 71 aa-5.14□□□□□ -3.23
PRPF40A-207ENST00000471701 NMES1Q9C002 83 aa-5.16□□□□□ -3.24
PRPF40A-207ENST00000471701 RB1CC1Q8TDY2 1594 aa-5.17□□□□□ -3.24
PRPF40A-207ENST00000471701 ABCA6Q8N139 1617 aa-5.18□□□□□ -3.24
PRPF40A-207ENST00000471701 DEFB131AP59861 70 aa-5.19□□□□□ -3.24
PRPF40A-207ENST00000471701 WDFY4Q6ZS81 3184 aa-5.2□□□□□ -3.24
PRPF40A-207ENST00000471701 CENPEQ02224 2701 aa-5.22□□□□□ -3.25
PRPF40A-207ENST00000471701 SERF2P84101 59 aa-5.23□□□□□ -3.25
PRPF40A-207ENST00000471701 EP400Q96L91 3159 aa-5.24□□□□□ -3.25
PRPF40A-207ENST00000471701 IGIPA6NJ69 53 aa-5.24□□□□□ -3.25
PRPF40A-207ENST00000471701 MROH2AA6NES4 1674 aa-5.25□□□□□ -3.25
PRPF40A-207ENST00000471701 LMO7Q8WWI1 1683 aa-5.28□□□□□ -3.25
PRPF40A-207ENST00000471701 UGGT2Q9NYU1 1516 aa-5.29□□□□□ -3.26
PRPF40A-207ENST00000471701 CEP250Q9BV73 2442 aa-5.3□□□□□ -3.26
PRPF40A-207ENST00000471701 DUOX2Q9NRD8 1548 aa-5.3□□□□□ -3.26
PRPF40A-207ENST00000471701 MUC3AQ02505 3323 aa-5.34□□□□□ -3.26
PRPF40A-207ENST00000471701 SYCP2Q9BX26 1530 aa-5.34□□□□□ -3.26
PRPF40A-207ENST00000471701 CCDC180Q9P1Z9 1646 aa-5.34□□□□□ -3.26
PRPF40A-207ENST00000471701 DCHS1Q96JQ0 3298 aa-5.41□□□□□ -3.28
PRPF40A-207ENST00000471701 H0YGX0 51 aa-5.42□□□□□ -3.28
PRPF40A-207ENST00000471701 UGGT1Q9NYU2 1555 aa-5.43□□□□□ -3.28
PRPF40A-207ENST00000471701 S100ZQ8WXG8 99 aa-5.44□□□□□ -3.28
PRPF40A-207ENST00000471701 TFF3Q07654 80 aa-5.47□□□□□ -3.29
PRPF40A-207ENST00000471701 DNAH14Q0VDD8 3507 aa-5.52□□□□□ -3.29
PRPF40A-207ENST00000471701 SCRIBQ14160 1630 aa-5.52□□□□□ -3.29
PRPF40A-207ENST00000471701 NRXN3Q9Y4C0 1643 aa-5.54□□□□□ -3.3
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms