RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 MUC5BQ9HC84 5762 aaPredicted RBP0.62□□□□□ -2.31
PRPF40A-206ENST00000471167 APELAP0DMC3 54 aa0.61□□□□□ -2.31
PRPF40A-206ENST00000471167 FLGP20930 4061 aaPredicted RBP0.61□□□□□ -2.31
PRPF40A-206ENST00000471167 ITPR3Q14573 2671 aa0.6□□□□□ -2.31
PRPF40A-206ENST00000471167 DNAH7Q8WXX0 4024 aa0.6□□□□□ -2.31
PRPF40A-206ENST00000471167 FASNP49327 2511 aaKnown RBP0.59□□□□□ -2.31
PRPF40A-206ENST00000471167 DEFB136Q30KP8 78 aa0.59□□□□□ -2.31
PRPF40A-206ENST00000471167 KRTAP19-5Q3LI72 72 aa0.59□□□□□ -2.31
PRPF40A-206ENST00000471167 ZANQ9Y493 2812 aa0.59□□□□□ -2.32
PRPF40A-206ENST00000471167 MGAQ8IWI9 3026 aa0.59□□□□□ -2.32
PRPF40A-206ENST00000471167 DNAH8Q96JB1 4490 aa0.58□□□□□ -2.32
PRPF40A-206ENST00000471167 SPRR2EP22531 72 aa0.58□□□□□ -2.32
PRPF40A-206ENST00000471167 DEFB1P60022 68 aa0.58□□□□□ -2.32
PRPF40A-206ENST00000471167 SPRR2FQ96RM1 72 aa0.58□□□□□ -2.32
PRPF40A-206ENST00000471167 TLN2Q9Y4G6 2542 aa0.58□□□□□ -2.32
PRPF40A-206ENST00000471167 DNAH9Q9NYC9 4486 aa0.57□□□□□ -2.32
PRPF40A-206ENST00000471167 DNAH6Q9C0G6 4158 aa0.57□□□□□ -2.32
PRPF40A-206ENST00000471167 NBEAQ8NFP9 2946 aa0.57□□□□□ -2.32
PRPF40A-206ENST00000471167 HTN1P15515 57 aa0.57□□□□□ -2.32
PRPF40A-206ENST00000471167 MYO18BQ8IUG5 2567 aa0.57□□□□□ -2.32
PRPF40A-206ENST00000471167 SPTBN5Q9NRC6 3674 aaKnown RBP0.57□□□□□ -2.32
PRPF40A-206ENST00000471167 DEFB124Q8NES8 71 aa0.56□□□□□ -2.32
PRPF40A-206ENST00000471167 HIVEP1P15822 2718 aa0.56□□□□□ -2.32
PRPF40A-206ENST00000471167 LAMA5O15230 3695 aa0.56□□□□□ -2.32
PRPF40A-206ENST00000471167 IGSF10Q6WRI0 2623 aa0.55□□□□□ -2.32
PRPF40A-206ENST00000471167 TEP1Q99973 2627 aaKnown RBP0.55□□□□□ -2.32
PRPF40A-206ENST00000471167 KALRNO60229 2985 aa0.55□□□□□ -2.32
PRPF40A-206ENST00000471167 TRIOO75962 3097 aa0.54□□□□□ -2.32
PRPF40A-206ENST00000471167 SVEP1Q4LDE5 3571 aa0.53□□□□□ -2.32
PRPF40A-206ENST00000471167 APOBP04114 4563 aaKnown RBP0.53□□□□□ -2.32
PRPF40A-206ENST00000471167 TGP01266 2768 aa0.53□□□□□ -2.32
PRPF40A-206ENST00000471167 CEP250Q9BV73 2442 aa0.53□□□□□ -2.33
PRPF40A-206ENST00000471167 LRP1BQ9NZR2 4599 aa0.52□□□□□ -2.33
PRPF40A-206ENST00000471167 USP9XQ93008 2570 aaPredicted RBP0.52□□□□□ -2.33
PRPF40A-206ENST00000471167 COL6A3P12111 3177 aa0.51□□□□□ -2.33
PRPF40A-206ENST00000471167 PKHD1P08F94 4074 aa0.51□□□□□ -2.33
PRPF40A-206ENST00000471167 AKAP9Q99996 3911 aa0.51□□□□□ -2.33
PRPF40A-206ENST00000471167 RELNP78509 3460 aa0.51□□□□□ -2.33
PRPF40A-206ENST00000471167 HMCN2Q8NDA2 5059 aa0.5□□□□□ -2.33
PRPF40A-206ENST00000471167 MAST4O15021 2626 aa0.5□□□□□ -2.33
PRPF40A-206ENST00000471167 MGAM2Q2M2H8 2515 aa0.49□□□□□ -2.33
PRPF40A-206ENST00000471167 LAMA1P25391 3075 aa0.49□□□□□ -2.33
PRPF40A-206ENST00000471167 DNAH1Q9P2D7 4330 aa0.49□□□□□ -2.33
PRPF40A-206ENST00000471167 MUC5ACP98088 5654 aa0.49□□□□□ -2.33
PRPF40A-206ENST00000471167 CFAP54Q96N23 3096 aa0.49□□□□□ -2.33
PRPF40A-206ENST00000471167 DEFB133Q30KQ1 61 aa0.48□□□□□ -2.33
PRPF40A-206ENST00000471167 FAT4Q6V0I7 4981 aa0.48□□□□□ -2.33
PRPF40A-206ENST00000471167 FAT3Q8TDW7 4589 aa0.48□□□□□ -2.33
PRPF40A-206ENST00000471167 CSMD1Q96PZ7 3565 aa0.47□□□□□ -2.33
PRPF40A-206ENST00000471167 FAT1Q14517 4588 aa0.47□□□□□ -2.33
PRPF40A-206ENST00000471167 HTTP42858 3142 aa0.47□□□□□ -2.33
PRPF40A-206ENST00000471167 PHGR1C9JFL3 82 aa0.47□□□□□ -2.33
PRPF40A-206ENST00000471167 DMXL2Q8TDJ6 3036 aa0.46□□□□□ -2.34
PRPF40A-206ENST00000471167 MXRA5Q9NR99 2828 aa0.46□□□□□ -2.34
PRPF40A-206ENST00000471167 FLNAP21333 2647 aaKnown RBP0.44□□□□□ -2.34
PRPF40A-206ENST00000471167 DNAH10Q8IVF4 4471 aa0.44□□□□□ -2.34
PRPF40A-206ENST00000471167 ITPR1Q14643 2758 aa0.44□□□□□ -2.34
PRPF40A-206ENST00000471167 WDR87Q6ZQQ6 2873 aa0.43□□□□□ -2.34
PRPF40A-206ENST00000471167 LAMA3Q16787 3333 aa0.43□□□□□ -2.34
PRPF40A-206ENST00000471167 ADGRG4Q8IZF6 3080 aa0.42□□□□□ -2.34
PRPF40A-206ENST00000471167 SPTAN1Q13813 2472 aaKnown RBP0.41□□□□□ -2.34
PRPF40A-206ENST00000471167 CMYA5Q8N3K9 4069 aa0.41□□□□□ -2.34
PRPF40A-206ENST00000471167 DOPEY1Q5JWR5 2465 aa0.41□□□□□ -2.34
PRPF40A-206ENST00000471167 PLECQ15149 4684 aaKnown RBP0.41□□□□□ -2.34
PRPF40A-206ENST00000471167 RPS29P62273 56 aaKnown RBP0.39□□□□□ -2.35
PRPF40A-206ENST00000471167 ATMQ13315 3056 aa0.39□□□□□ -2.35
PRPF40A-206ENST00000471167 MAP1AP78559 2803 aaPredicted RBP0.37□□□□□ -2.35
PRPF40A-206ENST00000471167 A0A096LPF7 62 aa0.37□□□□□ -2.35
PRPF40A-206ENST00000471167 GPR98Q8WXG9 6306 aa0.36□□□□□ -2.35
PRPF40A-206ENST00000471167 TEX15Q9BXT5 2789 aa0.36□□□□□ -2.35
PRPF40A-206ENST00000471167 MT1HP80294 61 aa0.36□□□□□ -2.35
PRPF40A-206ENST00000471167 LRP2P98164 4655 aa0.36□□□□□ -2.35
PRPF40A-206ENST00000471167 LRBAP50851 2863 aa0.36□□□□□ -2.35
PRPF40A-206ENST00000471167 KMT2DO14686 5537 aa0.35□□□□□ -2.35
PRPF40A-206ENST00000471167 STATHP02808 62 aa0.35□□□□□ -2.35
PRPF40A-206ENST00000471167 MT1EP04732 61 aa0.35□□□□□ -2.35
PRPF40A-206ENST00000471167 FRYLO94915 3013 aa0.35□□□□□ -2.35
PRPF40A-206ENST00000471167 HERC1Q15751 4861 aa0.35□□□□□ -2.35
PRPF40A-206ENST00000471167 NIPBLQ6KC79 2804 aaeCLIP0.34□□□□□ -2.35
PRPF40A-206ENST00000471167 NBEAL1Q6ZS30 2694 aa0.34□□□□□ -2.36
PRPF40A-206ENST00000471167 STAB2Q8WWQ8 2551 aa0.34□□□□□ -2.36
PRPF40A-206ENST00000471167 C5orf42Q9H799 3197 aa0.33□□□□□ -2.36
PRPF40A-206ENST00000471167 PRUNE2Q8WUY3 3088 aa0.33□□□□□ -2.36
PRPF40A-206ENST00000471167 CD52P31358 61 aa0.33□□□□□ -2.36
PRPF40A-206ENST00000471167 SMG1Q96Q15 3661 aaKnown RBP0.33□□□□□ -2.36
PRPF40A-206ENST00000471167 MDN1Q9NU22 5596 aa0.33□□□□□ -2.36
PRPF40A-206ENST00000471167 LINC01556Q5JQF7 62 aa0.32□□□□□ -2.36
PRPF40A-206ENST00000471167 TRRAPQ9Y4A5 3859 aa0.31□□□□□ -2.36
PRPF40A-206ENST00000471167 DEFB4AO15263 64 aa0.3□□□□□ -2.36
PRPF40A-206ENST00000471167 MT1LQ93083 61 aa0.3□□□□□ -2.36
PRPF40A-206ENST00000471167 DNAH12Q6ZR08 3092 aa0.29□□□□□ -2.36
PRPF40A-206ENST00000471167 CFAP46Q8IYW2 2715 aa0.29□□□□□ -2.36
PRPF40A-206ENST00000471167 DEFB108BQ8NET1 73 aa0.29□□□□□ -2.36
PRPF40A-206ENST00000471167 SZT2Q5T011 3432 aa0.29□□□□□ -2.36
PRPF40A-206ENST00000471167 DYNC1H1Q14204 4646 aaKnown RBP0.27□□□□□ -2.37
PRPF40A-206ENST00000471167 ITPR2Q14571 2701 aa0.27□□□□□ -2.37
PRPF40A-206ENST00000471167 DNAH17Q9UFH2 4485 aa0.27□□□□□ -2.37
PRPF40A-206ENST00000471167 DMDP11532 3685 aa0.26□□□□□ -2.37
PRPF40A-206ENST00000471167 DNAH5Q8TE73 4624 aa0.26□□□□□ -2.37
PRPF40A-206ENST00000471167 Q9Y3F1 56 aa0.25□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms