RNA–Protein interactions for RNA: ENST00000470824.1

PRPF3-204, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 898 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-204ENST00000470824 CNFNQ9BYD5 112 aa1.48□□□□□ -2.17
PRPF3-204ENST00000470824 HMCN2Q8NDA2 5059 aa1.48□□□□□ -2.17
PRPF3-204ENST00000470824 TNCP24821 2201 aa1.48□□□□□ -2.17
PRPF3-204ENST00000470824 IGKV2-29A2NJV5 120 aaPredicted RBP1.47□□□□□ -2.17
PRPF3-204ENST00000470824 DEFB4AO15263 64 aa1.47□□□□□ -2.17
PRPF3-204ENST00000470824 APELAP0DMC3 54 aa1.47□□□□□ -2.17
PRPF3-204ENST00000470824 PIGYQ3MUY2 71 aa1.47□□□□□ -2.17
PRPF3-204ENST00000470824 LINC00308Q8TCZ7 52 aa1.47□□□□□ -2.17
PRPF3-204ENST00000470824 KCNQ1DNQ9H478 68 aa1.47□□□□□ -2.17
PRPF3-204ENST00000470824 COX7BP24311 80 aa1.46□□□□□ -2.18
PRPF3-204ENST00000470824 UBE2DNLQ8IWF7 75 aa1.46□□□□□ -2.18
PRPF3-204ENST00000470824 APLNQ9ULZ1 77 aa1.46□□□□□ -2.18
PRPF3-204ENST00000470824 IGKV2-40A0A087WW87 121 aaPredicted RBP1.45□□□□□ -2.18
PRPF3-204ENST00000470824 TRGV1A0A0A0MS02 117 aa1.45□□□□□ -2.18
PRPF3-204ENST00000470824 A0A1B0GU69 56 aa1.45□□□□□ -2.18
PRPF3-204ENST00000470824 LINC00959A0A1B0GUT2 108 aa1.45□□□□□ -2.18
PRPF3-204ENST00000470824 TRBV6-4A0A1B0GX49 114 aa1.45□□□□□ -2.18
PRPF3-204ENST00000470824 H3BUA1 57 aa1.45□□□□□ -2.18
PRPF3-204ENST00000470824 NDUFA1O15239 70 aa1.45□□□□□ -2.18
PRPF3-204ENST00000470824 IGKV2D-40P01614 121 aaPredicted RBP1.45□□□□□ -2.18
PRPF3-204ENST00000470824 RPL39P5Q59GN2 51 aa1.45□□□□□ -2.18
PRPF3-204ENST00000470824 LRP1Q07954 4544 aaKnown RBP1.45□□□□□ -2.18
PRPF3-204ENST00000470824 A0A087WTM6 91 aa1.44□□□□□ -2.18
PRPF3-204ENST00000470824 RPL37AP61513 92 aaKnown RBP1.44□□□□□ -2.18
PRPF3-204ENST00000470824 Q5VSD8 79 aa1.44□□□□□ -2.18
PRPF3-204ENST00000470824 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.43□□□□□ -2.18
PRPF3-204ENST00000470824 DEFB131BA0A096LNP1 70 aa1.43□□□□□ -2.18
PRPF3-204ENST00000470824 HTN3P15516 51 aa1.43□□□□□ -2.18
PRPF3-204ENST00000470824 LINC00158P58513 81 aa1.43□□□□□ -2.18
PRPF3-204ENST00000470824 C10orf55Q5SWW7 151 aa1.43□□□□□ -2.18
PRPF3-204ENST00000470824 Q6ZQY7 126 aa1.43□□□□□ -2.18
PRPF3-204ENST00000470824 SMIM11BQ8TCY0 68 aa1.43□□□□□ -2.18
PRPF3-204ENST00000470824 USMG5Q96IX5 58 aa1.43□□□□□ -2.18
PRPF3-204ENST00000470824 TNXBP22105 4242 aa1.43□□□□□ -2.18
PRPF3-204ENST00000470824 NBDYA0A0U1RRE5 68 aa1.42□□□□□ -2.18
PRPF3-204ENST00000470824 ACYP2P14621 99 aa1.42□□□□□ -2.18
PRPF3-204ENST00000470824 KRTAP21-2Q3LI59 83 aa1.42□□□□□ -2.18
PRPF3-204ENST00000470824 LINC00472Q9H8W2 130 aa1.42□□□□□ -2.18
PRPF3-204ENST00000470824 SMR3BP02814 79 aaPredicted RBP1.41□□□□□ -2.18
PRPF3-204ENST00000470824 CRIP1P50238 77 aa1.41□□□□□ -2.18
PRPF3-204ENST00000470824 DEFB131AP59861 70 aa1.41□□□□□ -2.18
PRPF3-204ENST00000470824 SPINK9Q5DT21 86 aa1.41□□□□□ -2.18
PRPF3-204ENST00000470824 UNQ6190/PRO20217Q6UXQ8 127 aa1.41□□□□□ -2.18
PRPF3-204ENST00000470824 Q96NJ1 140 aa1.41□□□□□ -2.18
PRPF3-204ENST00000470824 LRP2P98164 4655 aa1.41□□□□□ -2.18
PRPF3-204ENST00000470824 RNF213Q63HN8 5207 aa1.4□□□□□ -2.18
PRPF3-204ENST00000470824 Q6ZSA8 131 aa1.4□□□□□ -2.19
PRPF3-204ENST00000470824 SSBP3-AS1Q7Z2R9 100 aa1.4□□□□□ -2.19
PRPF3-204ENST00000470824 RHPN1-AS1Q9BWJ2 59 aa1.4□□□□□ -2.19
PRPF3-204ENST00000470824 LPAP08519 4548 aa1.4□□□□□ -2.19
PRPF3-204ENST00000470824 POLR2KP53803 58 aaKnown RBP1.39□□□□□ -2.19
PRPF3-204ENST00000470824 PRCDQ00LT1 54 aa1.39□□□□□ -2.19
PRPF3-204ENST00000470824 Q8IZM0 81 aa1.39□□□□□ -2.19
PRPF3-204ENST00000470824 DMBT1Q9UGM3 2413 aaPredicted RBP1.38□□□□□ -2.19
PRPF3-204ENST00000470824 ANGP03950 147 aaKnown RBP1.38□□□□□ -2.19
PRPF3-204ENST00000470824 SPART-AS1P0CW21 52 aa1.38□□□□□ -2.19
PRPF3-204ENST00000470824 DEFB1P60022 68 aa1.38□□□□□ -2.19
PRPF3-204ENST00000470824 RPL39P62891 51 aaKnown RBP1.38□□□□□ -2.19
PRPF3-204ENST00000470824 LINC00575Q6W349 94 aa1.38□□□□□ -2.19
PRPF3-204ENST00000470824 TMEM167AQ8TBQ9 72 aa1.38□□□□□ -2.19
PRPF3-204ENST00000470824 CDKN2A-AS1Q9UH64 79 aa1.38□□□□□ -2.19
PRPF3-204ENST00000470824 K7EIM0 57 aa1.37□□□□□ -2.19
PRPF3-204ENST00000470824 WT1-ASQ06250 92 aa1.37□□□□□ -2.19
PRPF3-204ENST00000470824 RPL39LQ96EH5 51 aaKnown RBP1.37□□□□□ -2.19
PRPF3-204ENST00000470824 DEFB130BP0DP73 79 aa1.36□□□□□ -2.19
PRPF3-204ENST00000470824 DEFB130AP0DP74 79 aa1.36□□□□□ -2.19
PRPF3-204ENST00000470824 KLK9Q2XQG4 91 aa1.36□□□□□ -2.19
PRPF3-204ENST00000470824 DEFB104AQ8WTQ1 72 aa1.36□□□□□ -2.19
PRPF3-204ENST00000470824 FLG2Q5D862 2391 aaPredicted RBP1.36□□□□□ -2.19
PRPF3-204ENST00000470824 A0A096LPF7 62 aa1.35□□□□□ -2.19
PRPF3-204ENST00000470824 I3L2K1 104 aa1.35□□□□□ -2.19
PRPF3-204ENST00000470824 SPINK13Q1W4C9 94 aa1.35□□□□□ -2.19
PRPF3-204ENST00000470824 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.35□□□□□ -2.19
PRPF3-204ENST00000470824 Q6ZRX8 168 aa1.35□□□□□ -2.19
PRPF3-204ENST00000470824 TP53AIP1Q9HCN2 124 aa1.35□□□□□ -2.19
PRPF3-204ENST00000470824 SRRM2Q9UQ35 2752 aaKnown RBP1.35□□□□□ -2.19
PRPF3-204ENST00000470824 FAT4Q6V0I7 4981 aa1.34□□□□□ -2.19
PRPF3-204ENST00000470824 INE1O15225 51 aa1.34□□□□□ -2.19
PRPF3-204ENST00000470824 HTN1P15515 57 aa1.34□□□□□ -2.19
PRPF3-204ENST00000470824 NOP10Q9NPE3 64 aaKnown RBP1.34□□□□□ -2.19
PRPF3-204ENST00000470824 MUC2Q02817 5179 aa1.34□□□□□ -2.2
PRPF3-204ENST00000470824 MUC17Q685J3 4493 aa1.33□□□□□ -2.2
PRPF3-204ENST00000470824 K7EQZ3 153 aa1.33□□□□□ -2.2
PRPF3-204ENST00000470824 WFDC10BQ8IUB3 73 aa1.33□□□□□ -2.2
PRPF3-204ENST00000470824 CRIPTQ9P021 101 aa1.33□□□□□ -2.2
PRPF3-204ENST00000470824 C6orf48Q9UBA6 75 aa1.33□□□□□ -2.2
PRPF3-204ENST00000470824 KRTAP10-4P60372 401 aaPredicted RBP1.32□□□□□ -2.2
PRPF3-204ENST00000470824 WFDC13Q8IUB5 93 aa1.32□□□□□ -2.2
PRPF3-204ENST00000470824 PLAC4Q8WY50 150 aa1.32□□□□□ -2.2
PRPF3-204ENST00000470824 GVQW2A0A096LPI5 108 aaPredicted RBP1.31□□□□□ -2.2
PRPF3-204ENST00000470824 A8MTW9 85 aa1.31□□□□□ -2.2
PRPF3-204ENST00000470824 M0QY20 66 aa1.31□□□□□ -2.2
PRPF3-204ENST00000470824 MT1HL1P0DM35 61 aa1.31□□□□□ -2.2
PRPF3-204ENST00000470824 LELP1Q5T871 98 aa1.31□□□□□ -2.2
PRPF3-204ENST00000470824 IGLV5-48A0A075B6I7 105 aa1.3□□□□□ -2.2
PRPF3-204ENST00000470824 H3BNG1 76 aa1.3□□□□□ -2.2
PRPF3-204ENST00000470824 COX6A2Q02221 97 aa1.29□□□□□ -2.2
PRPF3-204ENST00000470824 TOMM7Q9P0U1 55 aa1.29□□□□□ -2.2
PRPF3-204ENST00000470824 PRO0255Q9UI72 69 aa1.29□□□□□ -2.2
PRPF3-204ENST00000470824 LINC01556Q5JQF7 62 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms