RNA–Protein interactions for RNA: ENST00000470589.1

GABRR3-201, Transcript of gamma-aminobutyric acid type A receptor rho3 subunit (gene/pseudogene), humanhuman

TSL 1 (best)

Gene GABRR3, Length 4,826 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRR3-201ENST00000470589 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.72□□□□□ -2.13
GABRR3-201ENST00000470589 KRTAP4-12Q9BQ66 201 aa1.72□□□□□ -2.13
GABRR3-201ENST00000470589 DCHS1Q96JQ0 3298 aa1.72□□□□□ -2.13
GABRR3-201ENST00000470589 WDFY3Q8IZQ1 3526 aa1.71□□□□□ -2.14
GABRR3-201ENST00000470589 DNAH2Q9P225 4427 aa1.7□□□□□ -2.14
GABRR3-201ENST00000470589 SRRM2Q9UQ35 2752 aaKnown RBP1.7□□□□□ -2.14
GABRR3-201ENST00000470589 RELNP78509 3460 aa1.7□□□□□ -2.14
GABRR3-201ENST00000470589 DNAH10Q8IVF4 4471 aa1.68□□□□□ -2.14
GABRR3-201ENST00000470589 LCE3AQ5TA76 89 aa1.68□□□□□ -2.14
GABRR3-201ENST00000470589 NBPF19A0A087WUL8 3843 aa1.67□□□□□ -2.14
GABRR3-201ENST00000470589 COL7A1Q02388 2944 aa1.67□□□□□ -2.14
GABRR3-201ENST00000470589 MYO15AQ9UKN7 3530 aa1.67□□□□□ -2.14
GABRR3-201ENST00000470589 DNAH1Q9P2D7 4330 aa1.66□□□□□ -2.14
GABRR3-201ENST00000470589 SPRR2GQ9BYE4 73 aa1.65□□□□□ -2.15
GABRR3-201ENST00000470589 DNAH9Q9NYC9 4486 aa1.64□□□□□ -2.15
GABRR3-201ENST00000470589 TRRAPQ9Y4A5 3859 aa1.64□□□□□ -2.15
GABRR3-201ENST00000470589 KRTAP5-2Q701N4 177 aa1.64□□□□□ -2.15
GABRR3-201ENST00000470589 DNAH17Q9UFH2 4485 aa1.64□□□□□ -2.15
GABRR3-201ENST00000470589 DNAH11Q96DT5 4516 aa1.64□□□□□ -2.15
GABRR3-201ENST00000470589 CUBNO60494 3623 aa1.64□□□□□ -2.15
GABRR3-201ENST00000470589 CSMD1Q96PZ7 3565 aa1.63□□□□□ -2.15
GABRR3-201ENST00000470589 BSNQ9UPA5 3926 aa1.63□□□□□ -2.15
GABRR3-201ENST00000470589 ASPMQ8IZT6 3477 aa1.63□□□□□ -2.15
GABRR3-201ENST00000470589 VPS13DQ5THJ4 4388 aa1.63□□□□□ -2.15
GABRR3-201ENST00000470589 ZFHX4Q86UP3 3567 aa1.62□□□□□ -2.15
GABRR3-201ENST00000470589 SMG1Q96Q15 3661 aaKnown RBP1.62□□□□□ -2.15
GABRR3-201ENST00000470589 LAMA5O15230 3695 aa1.61□□□□□ -2.15
GABRR3-201ENST00000470589 LCE1DQ5T752 114 aa1.61□□□□□ -2.15
GABRR3-201ENST00000470589 DNAH3Q8TD57 4116 aa1.6□□□□□ -2.15
GABRR3-201ENST00000470589 SVEP1Q4LDE5 3571 aa1.6□□□□□ -2.15
GABRR3-201ENST00000470589 DNAH5Q8TE73 4624 aa1.59□□□□□ -2.15
GABRR3-201ENST00000470589 KRTAP8-1Q8IUC2 63 aa1.59□□□□□ -2.15
GABRR3-201ENST00000470589 DYNC2H1Q8NCM8 4307 aaKnown RBP1.59□□□□□ -2.16
GABRR3-201ENST00000470589 AKAP9Q99996 3911 aa1.58□□□□□ -2.16
GABRR3-201ENST00000470589 DNAH6Q9C0G6 4158 aa1.58□□□□□ -2.16
GABRR3-201ENST00000470589 SPENQ96T58 3664 aaKnown RBP1.58□□□□□ -2.16
GABRR3-201ENST00000470589 MT1HP80294 61 aa1.57□□□□□ -2.16
GABRR3-201ENST00000470589 MT2AP02795 61 aa1.57□□□□□ -2.16
GABRR3-201ENST00000470589 KRTAP4-1Q9BYQ7 146 aa1.57□□□□□ -2.16
GABRR3-201ENST00000470589 PLECQ15149 4684 aaKnown RBP1.57□□□□□ -2.16
GABRR3-201ENST00000470589 DYNC1H1Q14204 4646 aaKnown RBP1.57□□□□□ -2.16
GABRR3-201ENST00000470589 DMDP11532 3685 aa1.55□□□□□ -2.16
GABRR3-201ENST00000470589 MUC3AQ02505 3323 aa1.55□□□□□ -2.16
GABRR3-201ENST00000470589 SACSQ9NZJ4 4579 aa1.55□□□□□ -2.16
GABRR3-201ENST00000470589 KRTAP19-1Q8IUB9 90 aa1.55□□□□□ -2.16
GABRR3-201ENST00000470589 KRTAP19-8Q3LI54 63 aa1.54□□□□□ -2.16
GABRR3-201ENST00000470589 VPS13CQ709C8 3753 aa1.54□□□□□ -2.16
GABRR3-201ENST00000470589 LCE3CQ5T5A8 94 aa1.54□□□□□ -2.16
GABRR3-201ENST00000470589 DNAH8Q96JB1 4490 aa1.54□□□□□ -2.16
GABRR3-201ENST00000470589 KRTAP4-11Q9BYQ6 195 aa1.53□□□□□ -2.16
GABRR3-201ENST00000470589 CRCT1Q9UGL9 99 aa1.53□□□□□ -2.16
GABRR3-201ENST00000470589 FAT2Q9NYQ8 4349 aa1.53□□□□□ -2.16
GABRR3-201ENST00000470589 CSMD2Q7Z408 3487 aa1.53□□□□□ -2.16
GABRR3-201ENST00000470589 CMYA5Q8N3K9 4069 aa1.53□□□□□ -2.16
GABRR3-201ENST00000470589 KRTAP9-7A8MTY7 169 aa1.53□□□□□ -2.16
GABRR3-201ENST00000470589 LCE5AQ5TCM9 118 aa1.52□□□□□ -2.17
GABRR3-201ENST00000470589 LCE3BQ5TA77 95 aa1.52□□□□□ -2.17
GABRR3-201ENST00000470589 SPRR5A0A1B0GTR4 108 aa1.52□□□□□ -2.17
GABRR3-201ENST00000470589 KRTAP10-5P60370 271 aa1.52□□□□□ -2.17
GABRR3-201ENST00000470589 MT1FP04733 61 aa1.51□□□□□ -2.17
GABRR3-201ENST00000470589 GPR98Q8WXG9 6306 aa1.51□□□□□ -2.17
GABRR3-201ENST00000470589 LRP1BQ9NZR2 4599 aa1.5□□□□□ -2.17
GABRR3-201ENST00000470589 HSPG2P98160 4391 aa1.5□□□□□ -2.17
GABRR3-201ENST00000470589 KRTAP19-5Q3LI72 72 aa1.49□□□□□ -2.17
GABRR3-201ENST00000470589 KRTAP2-2Q9BYT5 123 aa1.49□□□□□ -2.17
GABRR3-201ENST00000470589 DNAH7Q8WXX0 4024 aa1.48□□□□□ -2.17
GABRR3-201ENST00000470589 ANK2Q01484 3957 aa1.48□□□□□ -2.17
GABRR3-201ENST00000470589 STARD9Q9P2P6 4700 aa1.48□□□□□ -2.17
GABRR3-201ENST00000470589 MYCBP2O75592 4640 aa1.48□□□□□ -2.17
GABRR3-201ENST00000470589 KRTAP5-9P26371 169 aa1.47□□□□□ -2.17
GABRR3-201ENST00000470589 PRKDCP78527 4128 aaKnown RBP1.47□□□□□ -2.17
GABRR3-201ENST00000470589 KRTAP10-7P60409 375 aaPredicted RBP1.47□□□□□ -2.17
GABRR3-201ENST00000470589 APOBP04114 4563 aaKnown RBP1.47□□□□□ -2.17
GABRR3-201ENST00000470589 HERC1Q15751 4861 aa1.46□□□□□ -2.17
GABRR3-201ENST00000470589 LRP1Q07954 4544 aaKnown RBP1.46□□□□□ -2.18
GABRR3-201ENST00000470589 ZNF469Q96JG9 3925 aaPredicted RBP1.46□□□□□ -2.18
GABRR3-201ENST00000470589 FAT1Q14517 4588 aa1.46□□□□□ -2.18
GABRR3-201ENST00000470589 KRTAP9-3Q9BYQ3 159 aa1.45□□□□□ -2.18
GABRR3-201ENST00000470589 LCE4AQ5TA78 99 aa1.45□□□□□ -2.18
GABRR3-201ENST00000470589 VPS13BQ7Z7G8 4022 aa1.44□□□□□ -2.18
GABRR3-201ENST00000470589 RYR2Q92736 4967 aa1.44□□□□□ -2.18
GABRR3-201ENST00000470589 MT1XP80297 61 aa1.44□□□□□ -2.18
GABRR3-201ENST00000470589 FRAS1Q86XX4 4008 aa1.43□□□□□ -2.18
GABRR3-201ENST00000470589 FAT3Q8TDW7 4589 aa1.43□□□□□ -2.18
GABRR3-201ENST00000470589 MT1BP07438 61 aa1.42□□□□□ -2.18
GABRR3-201ENST00000470589 HECTD4Q9Y4D8 3996 aa1.42□□□□□ -2.18
GABRR3-201ENST00000470589 SPRR2FQ96RM1 72 aa1.41□□□□□ -2.18
GABRR3-201ENST00000470589 RYR1P21817 5038 aa1.4□□□□□ -2.18
GABRR3-201ENST00000470589 PCLOQ9Y6V0 5065 aa1.4□□□□□ -2.19
GABRR3-201ENST00000470589 CSMD3Q7Z407 3707 aa1.4□□□□□ -2.19
GABRR3-201ENST00000470589 PKHD1P08F94 4074 aa1.4□□□□□ -2.19
GABRR3-201ENST00000470589 MT1GP13640 62 aa1.4□□□□□ -2.19
GABRR3-201ENST00000470589 RYR3Q15413 4870 aa1.39□□□□□ -2.19
GABRR3-201ENST00000470589 LCE1AQ5T7P2 110 aa1.39□□□□□ -2.19
GABRR3-201ENST00000470589 DNHD1Q96M86 4753 aa1.39□□□□□ -2.19
GABRR3-201ENST00000470589 KMT2AQ03164 3969 aa1.38□□□□□ -2.19
GABRR3-201ENST00000470589 PKD1P98161 4303 aa1.36□□□□□ -2.19
GABRR3-201ENST00000470589 MT1LQ93083 61 aa1.36□□□□□ -2.19
GABRR3-201ENST00000470589 KRTAP12-4P60329 112 aa1.35□□□□□ -2.19
GABRR3-201ENST00000470589 PKHD1L1Q86WI1 4243 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms