RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 DNAH2Q9P225 4427 aa4.37□□□□□ -1.71
SMC4-212ENST00000470240 KRTAP10-4P60372 401 aaPredicted RBP4.36□□□□□ -1.71
SMC4-212ENST00000470240 KTN1-AS1Q86SY8 53 aa4.36□□□□□ -1.71
SMC4-212ENST00000470240 DNAH8Q96JB1 4490 aa4.36□□□□□ -1.71
SMC4-212ENST00000470240 SEC61BP60468 96 aaKnown RBP4.34□□□□□ -1.71
SMC4-212ENST00000470240 MIR22HGQ0VDD5 57 aa4.34□□□□□ -1.71
SMC4-212ENST00000470240 A8MU10 97 aa4.33□□□□□ -1.72
SMC4-212ENST00000470240 A6NN06 94 aa4.32□□□□□ -1.72
SMC4-212ENST00000470240 SPATA8Q6RVD6 105 aa4.32□□□□□ -1.72
SMC4-212ENST00000470240 Q5VSD8 79 aa4.31□□□□□ -1.72
SMC4-212ENST00000470240 FRAS1Q86XX4 4008 aa4.28□□□□□ -1.72
SMC4-212ENST00000470240 COX6B2Q6YFQ2 88 aa4.27□□□□□ -1.73
SMC4-212ENST00000470240 DNAH11Q96DT5 4516 aa4.26□□□□□ -1.73
SMC4-212ENST00000470240 KRTAP10-8P60410 259 aa4.26□□□□□ -1.73
SMC4-212ENST00000470240 DNAH5Q8TE73 4624 aa4.25□□□□□ -1.73
SMC4-212ENST00000470240 PKD1P98161 4303 aa4.25□□□□□ -1.73
SMC4-212ENST00000470240 RPL37P61927 97 aaKnown RBP4.24□□□□□ -1.73
SMC4-212ENST00000470240 A0A1B0GU33 70 aa4.22□□□□□ -1.73
SMC4-212ENST00000470240 FAT2Q9NYQ8 4349 aa4.22□□□□□ -1.73
SMC4-212ENST00000470240 K7ERS5 55 aa4.21□□□□□ -1.74
SMC4-212ENST00000470240 DNHD1Q96M86 4753 aa4.2□□□□□ -1.74
SMC4-212ENST00000470240 KRTAP2-2Q9BYT5 123 aa4.2□□□□□ -1.74
SMC4-212ENST00000470240 H1FX-AS1Q4G0G2 97 aa4.19□□□□□ -1.74
SMC4-212ENST00000470240 LRP1BQ9NZR2 4599 aa4.19□□□□□ -1.74
SMC4-212ENST00000470240 FLG2Q5D862 2391 aaPredicted RBP4.18□□□□□ -1.74
SMC4-212ENST00000470240 VPS13BQ7Z7G8 4022 aa4.17□□□□□ -1.74
SMC4-212ENST00000470240 RBM12B-AS1Q9P1G2 102 aa4.17□□□□□ -1.74
SMC4-212ENST00000470240 HYDINQ4G0P3 5121 aa4.17□□□□□ -1.74
SMC4-212ENST00000470240 S4R3F8 94 aa4.16□□□□□ -1.74
SMC4-212ENST00000470240 SACSQ9NZJ4 4579 aa4.14□□□□□ -1.75
SMC4-212ENST00000470240 H0YAA0 97 aa4.12□□□□□ -1.75
SMC4-212ENST00000470240 MT3P25713 68 aa4.11□□□□□ -1.75
SMC4-212ENST00000470240 TPRXLQ17RH7 258 aa4.11□□□□□ -1.75
SMC4-212ENST00000470240 MT1HL1P0DM35 61 aa4.1□□□□□ -1.75
SMC4-212ENST00000470240 KRTAP10-6P60371 365 aaPredicted RBP4.08□□□□□ -1.76
SMC4-212ENST00000470240 PRAC1Q96KF2 57 aa4.07□□□□□ -1.76
SMC4-212ENST00000470240 DYNC1H1Q14204 4646 aaKnown RBP4.06□□□□□ -1.76
SMC4-212ENST00000470240 PKHD1L1Q86WI1 4243 aa4.06□□□□□ -1.76
SMC4-212ENST00000470240 KRTAP10-7P60409 375 aaPredicted RBP4.06□□□□□ -1.76
SMC4-212ENST00000470240 PKHD1P08F94 4074 aa4.06□□□□□ -1.76
SMC4-212ENST00000470240 APOBP04114 4563 aaKnown RBP4.03□□□□□ -1.76
SMC4-212ENST00000470240 CSAG1Q6PB30 78 aa4.03□□□□□ -1.76
SMC4-212ENST00000470240 ADM2Q7Z4H4 148 aa4.03□□□□□ -1.76
SMC4-212ENST00000470240 DMBT1Q9UGM3 2413 aaPredicted RBP4.02□□□□□ -1.77
SMC4-212ENST00000470240 LINC01554Q52M75 96 aa4.02□□□□□ -1.77
SMC4-212ENST00000470240 A0A0D9SG42 100 aa3.98□□□□□ -1.77
SMC4-212ENST00000470240 RYR2Q92736 4967 aa3.97□□□□□ -1.77
SMC4-212ENST00000470240 ROMO1P60602 79 aa3.97□□□□□ -1.77
SMC4-212ENST00000470240 M0QZ58 72 aa3.96□□□□□ -1.78
SMC4-212ENST00000470240 FAT1Q14517 4588 aa3.95□□□□□ -1.78
SMC4-212ENST00000470240 KRTAP25-1Q3LHN0 102 aa3.95□□□□□ -1.78
SMC4-212ENST00000470240 P0C880 135 aa3.93□□□□□ -1.78
SMC4-212ENST00000470240 KRTAP13-4Q3LI77 160 aa3.91□□□□□ -1.78
SMC4-212ENST00000470240 LCE1EQ5T753 118 aa3.89□□□□□ -1.79
SMC4-212ENST00000470240 SPINT4Q6UDR6 99 aa3.89□□□□□ -1.79
SMC4-212ENST00000470240 TNXBP22105 4242 aa3.89□□□□□ -1.79
SMC4-212ENST00000470240 HSPG2P98160 4391 aa3.88□□□□□ -1.79
SMC4-212ENST00000470240 KRTAP5-11Q6L8G4 156 aa3.88□□□□□ -1.79
SMC4-212ENST00000470240 CRIPTQ9P021 101 aa3.87□□□□□ -1.79
SMC4-212ENST00000470240 R4GN34 69 aa3.86□□□□□ -1.79
SMC4-212ENST00000470240 FAT3Q8TDW7 4589 aa3.86□□□□□ -1.79
SMC4-212ENST00000470240 RYR1P21817 5038 aa3.82□□□□□ -1.8
SMC4-212ENST00000470240 KRTAP12-1P59990 96 aa3.82□□□□□ -1.8
SMC4-212ENST00000470240 KRTAP12-2P59991 146 aa3.82□□□□□ -1.8
SMC4-212ENST00000470240 LRP1Q07954 4544 aaKnown RBP3.82□□□□□ -1.8
SMC4-212ENST00000470240 KMT2CQ8NEZ4 4911 aaKnown RBP3.81□□□□□ -1.8
SMC4-212ENST00000470240 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.8□□□□□ -1.8
SMC4-212ENST00000470240 KIAA1109Q2LD37 5005 aa3.74□□□□□ -1.81
SMC4-212ENST00000470240 KRTAP4-1Q9BYQ7 146 aa3.72□□□□□ -1.81
SMC4-212ENST00000470240 RYR3Q15413 4870 aa3.71□□□□□ -1.82
SMC4-212ENST00000470240 NDUFAF8A1L188 74 aa3.7□□□□□ -1.82
SMC4-212ENST00000470240 C10orf95Q9H7T3 257 aa3.69□□□□□ -1.82
SMC4-212ENST00000470240 CAMK2N1Q7Z7J9 78 aa3.68□□□□□ -1.82
SMC4-212ENST00000470240 KRTAP10-5P60370 271 aa3.66□□□□□ -1.82
SMC4-212ENST00000470240 MYCBP2O75592 4640 aa3.66□□□□□ -1.82
SMC4-212ENST00000470240 KRTAP19-2Q3LHN2 52 aa3.63□□□□□ -1.83
SMC4-212ENST00000470240 PP632Q6XCG6 107 aa3.62□□□□□ -1.83
SMC4-212ENST00000470240 LCE1FQ5T754 118 aa3.6□□□□□ -1.83
SMC4-212ENST00000470240 LRP2P98164 4655 aa3.59□□□□□ -1.83
SMC4-212ENST00000470240 KRTAP10-12P60413 245 aa3.59□□□□□ -1.83
SMC4-212ENST00000470240 EPPK1P58107 5090 aaKnown RBP3.58□□□□□ -1.84
SMC4-212ENST00000470240 M0R2T5 61 aa3.57□□□□□ -1.84
SMC4-212ENST00000470240 LPAP08519 4548 aa3.55□□□□□ -1.84
SMC4-212ENST00000470240 TNP1P09430 55 aa3.54□□□□□ -1.84
SMC4-212ENST00000470240 PLAC4Q8WY50 150 aa3.54□□□□□ -1.84
SMC4-212ENST00000470240 MUC17Q685J3 4493 aa3.51□□□□□ -1.85
SMC4-212ENST00000470240 ABCA13Q86UQ4 5058 aa3.49□□□□□ -1.85
SMC4-212ENST00000470240 SPRR2GQ9BYE4 73 aa3.47□□□□□ -1.85
SMC4-212ENST00000470240 KRTAP9-6A8MVA2 160 aa3.43□□□□□ -1.86
SMC4-212ENST00000470240 KRTAP10-10P60014 251 aa3.43□□□□□ -1.86
SMC4-212ENST00000470240 MT1HP80294 61 aa3.43□□□□□ -1.86
SMC4-212ENST00000470240 LUZP6Q538Z0 58 aa3.43□□□□□ -1.86
SMC4-212ENST00000470240 HERC2O95714 4834 aa3.42□□□□□ -1.86
SMC4-212ENST00000470240 BIRC6Q9NR09 4857 aa3.42□□□□□ -1.86
SMC4-212ENST00000470240 LCE3CQ5T5A8 94 aa3.41□□□□□ -1.86
SMC4-212ENST00000470240 FLGP20930 4061 aaPredicted RBP3.36□□□□□ -1.87
SMC4-212ENST00000470240 MT2AP02795 61 aa3.36□□□□□ -1.87
SMC4-212ENST00000470240 MT1FP04733 61 aa3.34□□□□□ -1.87
SMC4-212ENST00000470240 KRTAP19-8Q3LI54 63 aa3.32□□□□□ -1.88
SMC4-212ENST00000470240 KRTAP5-1Q6L8H4 278 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms