RNA–Protein interactions for RNA: ENST00000468690.2

HNRNPU-207, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-207ENST00000468690 DNAH3Q8TD57 4116 aa3.59□□□□□ -1.84
HNRNPU-207ENST00000468690 PLECQ15149 4684 aaKnown RBP3.57□□□□□ -1.84
HNRNPU-207ENST00000468690 DNAH6Q9C0G6 4158 aa3.57□□□□□ -1.84
HNRNPU-207ENST00000468690 DNAH11Q96DT5 4516 aa3.56□□□□□ -1.84
HNRNPU-207ENST00000468690 KRTAP4-5Q9BYR2 181 aa3.54□□□□□ -1.84
HNRNPU-207ENST00000468690 DYNC2H1Q8NCM8 4307 aaKnown RBP3.54□□□□□ -1.84
HNRNPU-207ENST00000468690 ANK2Q01484 3957 aa3.54□□□□□ -1.84
HNRNPU-207ENST00000468690 DNAH5Q8TE73 4624 aa3.52□□□□□ -1.85
HNRNPU-207ENST00000468690 KRTAP23-1A1A580 65 aa3.5□□□□□ -1.85
HNRNPU-207ENST00000468690 DNAH8Q96JB1 4490 aa3.48□□□□□ -1.85
HNRNPU-207ENST00000468690 SRRM2Q9UQ35 2752 aaKnown RBP3.48□□□□□ -1.85
HNRNPU-207ENST00000468690 DYNC1H1Q14204 4646 aaKnown RBP3.47□□□□□ -1.85
HNRNPU-207ENST00000468690 STARD9Q9P2P6 4700 aa3.44□□□□□ -1.86
HNRNPU-207ENST00000468690 CMYA5Q8N3K9 4069 aa3.43□□□□□ -1.86
HNRNPU-207ENST00000468690 SACSQ9NZJ4 4579 aa3.43□□□□□ -1.86
HNRNPU-207ENST00000468690 FAT2Q9NYQ8 4349 aa3.42□□□□□ -1.86
HNRNPU-207ENST00000468690 LRP1BQ9NZR2 4599 aa3.39□□□□□ -1.87
HNRNPU-207ENST00000468690 COL7A1Q02388 2944 aa3.39□□□□□ -1.87
HNRNPU-207ENST00000468690 LCE2BO14633 110 aa3.36□□□□□ -1.87
HNRNPU-207ENST00000468690 PRKDCP78527 4128 aaKnown RBP3.33□□□□□ -1.88
HNRNPU-207ENST00000468690 KRTAP15-1Q3LI76 137 aa3.33□□□□□ -1.88
HNRNPU-207ENST00000468690 KRTAP10-12P60413 245 aa3.32□□□□□ -1.88
HNRNPU-207ENST00000468690 DNHD1Q96M86 4753 aa3.32□□□□□ -1.88
HNRNPU-207ENST00000468690 KRTAP4-1Q9BYQ7 146 aa3.31□□□□□ -1.88
HNRNPU-207ENST00000468690 DNAH7Q8WXX0 4024 aa3.31□□□□□ -1.88
HNRNPU-207ENST00000468690 LORP23490 312 aaPredicted RBP3.3□□□□□ -1.88
HNRNPU-207ENST00000468690 SPRR2GQ9BYE4 73 aa3.27□□□□□ -1.89
HNRNPU-207ENST00000468690 MT1HP80294 61 aa3.26□□□□□ -1.89
HNRNPU-207ENST00000468690 KMT2AQ03164 3969 aa3.24□□□□□ -1.89
HNRNPU-207ENST00000468690 HECTD4Q9Y4D8 3996 aa3.24□□□□□ -1.89
HNRNPU-207ENST00000468690 LCE2CQ5TA81 110 aa3.23□□□□□ -1.89
HNRNPU-207ENST00000468690 KRTAP12-3P60328 96 aa3.23□□□□□ -1.89
HNRNPU-207ENST00000468690 FAT1Q14517 4588 aa3.23□□□□□ -1.89
HNRNPU-207ENST00000468690 RYR2Q92736 4967 aa3.23□□□□□ -1.89
HNRNPU-207ENST00000468690 VPS13BQ7Z7G8 4022 aa3.22□□□□□ -1.89
HNRNPU-207ENST00000468690 APOBP04114 4563 aaKnown RBP3.21□□□□□ -1.9
HNRNPU-207ENST00000468690 HSPG2P98160 4391 aa3.2□□□□□ -1.9
HNRNPU-207ENST00000468690 MT2AP02795 61 aa3.2□□□□□ -1.9
HNRNPU-207ENST00000468690 LCE3AQ5TA76 89 aa3.2□□□□□ -1.9
HNRNPU-207ENST00000468690 CSMD3Q7Z407 3707 aa3.2□□□□□ -1.9
HNRNPU-207ENST00000468690 RYR1P21817 5038 aa3.19□□□□□ -1.9
HNRNPU-207ENST00000468690 INE1O15225 51 aa3.18□□□□□ -1.9
HNRNPU-207ENST00000468690 KRTAP17-1Q9BYP8 105 aa3.17□□□□□ -1.9
HNRNPU-207ENST00000468690 FAT3Q8TDW7 4589 aa3.15□□□□□ -1.91
HNRNPU-207ENST00000468690 KRTAP19-4Q3LI73 84 aa3.13□□□□□ -1.91
HNRNPU-207ENST00000468690 RYR3Q15413 4870 aa3.13□□□□□ -1.91
HNRNPU-207ENST00000468690 HERC1Q15751 4861 aa3.13□□□□□ -1.91
HNRNPU-207ENST00000468690 MT1FP04733 61 aa3.12□□□□□ -1.91
HNRNPU-207ENST00000468690 MYCBP2O75592 4640 aa3.11□□□□□ -1.91
HNRNPU-207ENST00000468690 LYSTQ99698 3801 aa3.11□□□□□ -1.91
HNRNPU-207ENST00000468690 KRTAP19-8Q3LI54 63 aa3.1□□□□□ -1.91
HNRNPU-207ENST00000468690 PKHD1L1Q86WI1 4243 aa3.09□□□□□ -1.91
HNRNPU-207ENST00000468690 PKD1P98161 4303 aa3.08□□□□□ -1.92
HNRNPU-207ENST00000468690 FRAS1Q86XX4 4008 aa3.06□□□□□ -1.92
HNRNPU-207ENST00000468690 LCE2AQ5TA79 106 aaPredicted RBP3.06□□□□□ -1.92
HNRNPU-207ENST00000468690 HYDINQ4G0P3 5121 aa3.05□□□□□ -1.92
HNRNPU-207ENST00000468690 KIAA1109Q2LD37 5005 aa3.04□□□□□ -1.92
HNRNPU-207ENST00000468690 KRTAP8-1Q8IUC2 63 aa3.03□□□□□ -1.92
HNRNPU-207ENST00000468690 PKHD1P08F94 4074 aa3.03□□□□□ -1.92
HNRNPU-207ENST00000468690 KRTAP19-1Q8IUB9 90 aa3.03□□□□□ -1.92
HNRNPU-207ENST00000468690 BIRC6Q9NR09 4857 aa3.02□□□□□ -1.93
HNRNPU-207ENST00000468690 LRP1Q07954 4544 aaKnown RBP2.97□□□□□ -1.93
HNRNPU-207ENST00000468690 KRTAP9-8Q9BYQ0 159 aa2.97□□□□□ -1.93
HNRNPU-207ENST00000468690 TNXBP22105 4242 aa2.97□□□□□ -1.93
HNRNPU-207ENST00000468690 MUC17Q685J3 4493 aa2.95□□□□□ -1.94
HNRNPU-207ENST00000468690 KRTAP19-2Q3LHN2 52 aa2.95□□□□□ -1.94
HNRNPU-207ENST00000468690 KRTAP10-5P60370 271 aa2.93□□□□□ -1.94
HNRNPU-207ENST00000468690 MT1BP07438 61 aa2.92□□□□□ -1.94
HNRNPU-207ENST00000468690 KRTAP19-5Q3LI72 72 aa2.92□□□□□ -1.94
HNRNPU-207ENST00000468690 MT1XP80297 61 aa2.91□□□□□ -1.94
HNRNPU-207ENST00000468690 LCE3CQ5T5A8 94 aa2.91□□□□□ -1.94
HNRNPU-207ENST00000468690 HERC2O95714 4834 aa2.91□□□□□ -1.94
HNRNPU-207ENST00000468690 KRTAP9-3Q9BYQ3 159 aa2.9□□□□□ -1.94
HNRNPU-207ENST00000468690 CRCT1Q9UGL9 99 aa2.86□□□□□ -1.95
HNRNPU-207ENST00000468690 KRTAP10-7P60409 375 aaPredicted RBP2.85□□□□□ -1.95
HNRNPU-207ENST00000468690 SPRR5A0A1B0GTR4 108 aa2.84□□□□□ -1.96
HNRNPU-207ENST00000468690 LRP2P98164 4655 aa2.8□□□□□ -1.96
HNRNPU-207ENST00000468690 FLGP20930 4061 aaPredicted RBP2.79□□□□□ -1.96
HNRNPU-207ENST00000468690 KMT2CQ8NEZ4 4911 aaKnown RBP2.79□□□□□ -1.96
HNRNPU-207ENST00000468690 SPRR2FQ96RM1 72 aa2.78□□□□□ -1.96
HNRNPU-207ENST00000468690 PCLOQ9Y6V0 5065 aa2.75□□□□□ -1.97
HNRNPU-207ENST00000468690 LPAP08519 4548 aa2.73□□□□□ -1.97
HNRNPU-207ENST00000468690 EPPK1P58107 5090 aaKnown RBP2.73□□□□□ -1.97
HNRNPU-207ENST00000468690 MT1GP13640 62 aa2.72□□□□□ -1.97
HNRNPU-207ENST00000468690 ABCA13Q86UQ4 5058 aa2.7□□□□□ -1.98
HNRNPU-207ENST00000468690 KRTAP19-6Q3LI70 58 aa2.68□□□□□ -1.98
HNRNPU-207ENST00000468690 KRTAP4-8A0A0G2JLE6 195 aa2.63□□□□□ -1.99
HNRNPU-207ENST00000468690 SPRR2EP22531 72 aa2.63□□□□□ -1.99
HNRNPU-207ENST00000468690 SPRR2BP35325 72 aa2.63□□□□□ -1.99
HNRNPU-207ENST00000468690 SPRR2AP35326 72 aa2.63□□□□□ -1.99
HNRNPU-207ENST00000468690 KRTAP4-8Q9BYQ9 185 aa2.63□□□□□ -1.99
HNRNPU-207ENST00000468690 MT1EP04732 61 aa2.62□□□□□ -1.99
HNRNPU-207ENST00000468690 MT1LQ93083 61 aa2.62□□□□□ -1.99
HNRNPU-207ENST00000468690 KRTAP19-3Q7Z4W3 81 aa2.62□□□□□ -1.99
HNRNPU-207ENST00000468690 KRTAP9-2Q9BYQ4 174 aa2.57□□□□□ -2
HNRNPU-207ENST00000468690 SPRR2DP22532 72 aa2.56□□□□□ -2
HNRNPU-207ENST00000468690 HMCN2Q8NDA2 5059 aa2.56□□□□□ -2
HNRNPU-207ENST00000468690 RNF213Q63HN8 5207 aa2.56□□□□□ -2
HNRNPU-207ENST00000468690 FAT4Q6V0I7 4981 aa2.54□□□□□ -2
HNRNPU-207ENST00000468690 KRTAP9-6A0A140TA67 174 aa2.53□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms