RNA–Protein interactions for RNA: ENST00000466830.5

CMC1-205, Transcript of C-X9-C motif containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMC1, Length 6,033 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-205ENST00000466830 DNAH11Q96DT5 4516 aa5.11□□□□□ -1.59
CMC1-205ENST00000466830 DNHD1Q96M86 4753 aa5.08□□□□□ -1.6
CMC1-205ENST00000466830 VPS13DQ5THJ4 4388 aa5.06□□□□□ -1.6
CMC1-205ENST00000466830 DNAH17Q9UFH2 4485 aa5.04□□□□□ -1.6
CMC1-205ENST00000466830 DNAH10Q8IVF4 4471 aa5.03□□□□□ -1.6
CMC1-205ENST00000466830 KRTAP15-1Q3LI76 137 aa4.98□□□□□ -1.61
CMC1-205ENST00000466830 STARD9Q9P2P6 4700 aa4.97□□□□□ -1.61
CMC1-205ENST00000466830 DYNC1H1Q14204 4646 aaKnown RBP4.96□□□□□ -1.62
CMC1-205ENST00000466830 FAT1Q14517 4588 aa4.92□□□□□ -1.62
CMC1-205ENST00000466830 LORP23490 312 aaPredicted RBP4.92□□□□□ -1.62
CMC1-205ENST00000466830 LRP1BQ9NZR2 4599 aa4.92□□□□□ -1.62
CMC1-205ENST00000466830 DNAH2Q9P225 4427 aa4.91□□□□□ -1.62
CMC1-205ENST00000466830 KRTAP10-12P60413 245 aa4.87□□□□□ -1.63
CMC1-205ENST00000466830 DNAH8Q96JB1 4490 aa4.85□□□□□ -1.63
CMC1-205ENST00000466830 KRTAP23-1A1A580 65 aa4.85□□□□□ -1.63
CMC1-205ENST00000466830 DNAH3Q8TD57 4116 aa4.84□□□□□ -1.63
CMC1-205ENST00000466830 PRKDCP78527 4128 aaKnown RBP4.84□□□□□ -1.63
CMC1-205ENST00000466830 SACSQ9NZJ4 4579 aa4.83□□□□□ -1.64
CMC1-205ENST00000466830 RYR1P21817 5038 aa4.81□□□□□ -1.64
CMC1-205ENST00000466830 DYNC2H1Q8NCM8 4307 aaKnown RBP4.81□□□□□ -1.64
CMC1-205ENST00000466830 ANK2Q01484 3957 aa4.8□□□□□ -1.64
CMC1-205ENST00000466830 KRTAP4-1Q9BYQ7 146 aa4.8□□□□□ -1.64
CMC1-205ENST00000466830 KRTAP12-3P60328 96 aa4.76□□□□□ -1.65
CMC1-205ENST00000466830 FAT2Q9NYQ8 4349 aa4.76□□□□□ -1.65
CMC1-205ENST00000466830 KMT2AQ03164 3969 aa4.75□□□□□ -1.65
CMC1-205ENST00000466830 LCE3AQ5TA76 89 aa4.75□□□□□ -1.65
CMC1-205ENST00000466830 APOBP04114 4563 aaKnown RBP4.7□□□□□ -1.66
CMC1-205ENST00000466830 VPS13BQ7Z7G8 4022 aa4.68□□□□□ -1.66
CMC1-205ENST00000466830 KIAA1109Q2LD37 5005 aa4.68□□□□□ -1.66
CMC1-205ENST00000466830 LYSTQ99698 3801 aa4.66□□□□□ -1.66
CMC1-205ENST00000466830 INE1O15225 51 aa4.66□□□□□ -1.66
CMC1-205ENST00000466830 MYCBP2O75592 4640 aa4.64□□□□□ -1.67
CMC1-205ENST00000466830 MT1HP80294 61 aa4.62□□□□□ -1.67
CMC1-205ENST00000466830 RYR3Q15413 4870 aa4.6□□□□□ -1.67
CMC1-205ENST00000466830 CMYA5Q8N3K9 4069 aa4.6□□□□□ -1.67
CMC1-205ENST00000466830 SPRR2GQ9BYE4 73 aa4.59□□□□□ -1.67
CMC1-205ENST00000466830 MT2AP02795 61 aa4.58□□□□□ -1.68
CMC1-205ENST00000466830 HECTD4Q9Y4D8 3996 aa4.54□□□□□ -1.68
CMC1-205ENST00000466830 DNAH6Q9C0G6 4158 aa4.54□□□□□ -1.68
CMC1-205ENST00000466830 FRAS1Q86XX4 4008 aa4.53□□□□□ -1.68
CMC1-205ENST00000466830 RYR2Q92736 4967 aa4.53□□□□□ -1.68
CMC1-205ENST00000466830 KRTAP17-1Q9BYP8 105 aa4.53□□□□□ -1.68
CMC1-205ENST00000466830 LRP1Q07954 4544 aaKnown RBP4.53□□□□□ -1.68
CMC1-205ENST00000466830 CRCT1Q9UGL9 99 aa4.52□□□□□ -1.69
CMC1-205ENST00000466830 DNAH7Q8WXX0 4024 aa4.51□□□□□ -1.69
CMC1-205ENST00000466830 MT1FP04733 61 aa4.49□□□□□ -1.69
CMC1-205ENST00000466830 FAT3Q8TDW7 4589 aa4.46□□□□□ -1.7
CMC1-205ENST00000466830 HYDINQ4G0P3 5121 aa4.43□□□□□ -1.7
CMC1-205ENST00000466830 KRTAP8-1Q8IUC2 63 aa4.42□□□□□ -1.7
CMC1-205ENST00000466830 HERC2O95714 4834 aa4.37□□□□□ -1.71
CMC1-205ENST00000466830 KRTAP19-1Q8IUB9 90 aa4.35□□□□□ -1.71
CMC1-205ENST00000466830 LRP2P98164 4655 aa4.33□□□□□ -1.72
CMC1-205ENST00000466830 PKHD1P08F94 4074 aa4.32□□□□□ -1.72
CMC1-205ENST00000466830 KRTAP19-8Q3LI54 63 aa4.3□□□□□ -1.72
CMC1-205ENST00000466830 HSPG2P98160 4391 aa4.29□□□□□ -1.72
CMC1-205ENST00000466830 KRTAP19-5Q3LI72 72 aa4.29□□□□□ -1.72
CMC1-205ENST00000466830 KRTAP10-5P60370 271 aa4.25□□□□□ -1.73
CMC1-205ENST00000466830 BIRC6Q9NR09 4857 aa4.24□□□□□ -1.73
CMC1-205ENST00000466830 PKD1P98161 4303 aa4.23□□□□□ -1.73
CMC1-205ENST00000466830 LCE3CQ5T5A8 94 aa4.22□□□□□ -1.73
CMC1-205ENST00000466830 KRTAP10-7P60409 375 aaPredicted RBP4.2□□□□□ -1.74
CMC1-205ENST00000466830 KMT2CQ8NEZ4 4911 aaKnown RBP4.19□□□□□ -1.74
CMC1-205ENST00000466830 LCE2CQ5TA81 110 aa4.18□□□□□ -1.74
CMC1-205ENST00000466830 HERC1Q15751 4861 aa4.18□□□□□ -1.74
CMC1-205ENST00000466830 PCLOQ9Y6V0 5065 aa4.18□□□□□ -1.74
CMC1-205ENST00000466830 KRTAP9-8Q9BYQ0 159 aa4.18□□□□□ -1.74
CMC1-205ENST00000466830 MT1XP80297 61 aa4.18□□□□□ -1.74
CMC1-205ENST00000466830 KRTAP19-4Q3LI73 84 aa4.17□□□□□ -1.74
CMC1-205ENST00000466830 MT1BP07438 61 aa4.16□□□□□ -1.74
CMC1-205ENST00000466830 SPRR2FQ96RM1 72 aa4.11□□□□□ -1.75
CMC1-205ENST00000466830 LPAP08519 4548 aa4.11□□□□□ -1.75
CMC1-205ENST00000466830 PKHD1L1Q86WI1 4243 aa4.09□□□□□ -1.75
CMC1-205ENST00000466830 TNXBP22105 4242 aa4.07□□□□□ -1.76
CMC1-205ENST00000466830 KRTAP19-2Q3LHN2 52 aa4.07□□□□□ -1.76
CMC1-205ENST00000466830 KRTAP9-3Q9BYQ3 159 aa4.07□□□□□ -1.76
CMC1-205ENST00000466830 SPRR5A0A1B0GTR4 108 aa4.05□□□□□ -1.76
CMC1-205ENST00000466830 MUC17Q685J3 4493 aa4.04□□□□□ -1.76
CMC1-205ENST00000466830 ABCA13Q86UQ4 5058 aa4.02□□□□□ -1.77
CMC1-205ENST00000466830 EPPK1P58107 5090 aaKnown RBP3.99□□□□□ -1.77
CMC1-205ENST00000466830 FLGP20930 4061 aaPredicted RBP3.97□□□□□ -1.77
CMC1-205ENST00000466830 KRTAP4-8A0A0G2JLE6 195 aa3.96□□□□□ -1.77
CMC1-205ENST00000466830 KRTAP4-8Q9BYQ9 185 aa3.96□□□□□ -1.77
CMC1-205ENST00000466830 LCE2BO14633 110 aa3.87□□□□□ -1.79
CMC1-205ENST00000466830 MT1GP13640 62 aa3.85□□□□□ -1.79
CMC1-205ENST00000466830 RNF213Q63HN8 5207 aa3.82□□□□□ -1.8
CMC1-205ENST00000466830 FAT4Q6V0I7 4981 aa3.81□□□□□ -1.8
CMC1-205ENST00000466830 SPRR2EP22531 72 aa3.8□□□□□ -1.8
CMC1-205ENST00000466830 SPRR2BP35325 72 aa3.8□□□□□ -1.8
CMC1-205ENST00000466830 SPRR2AP35326 72 aa3.8□□□□□ -1.8
CMC1-205ENST00000466830 UBR4Q5T4S7 5183 aa3.78□□□□□ -1.8
CMC1-205ENST00000466830 LCE3BQ5TA77 95 aa3.78□□□□□ -1.8
CMC1-205ENST00000466830 MT1LQ93083 61 aa3.75□□□□□ -1.81
CMC1-205ENST00000466830 KRTAP12-4P60329 112 aa3.74□□□□□ -1.81
CMC1-205ENST00000466830 MT1EP04732 61 aa3.74□□□□□ -1.81
CMC1-205ENST00000466830 KRTAP4-7Q9BYR0 210 aa3.73□□□□□ -1.81
CMC1-205ENST00000466830 KRTAP19-3Q7Z4W3 81 aa3.72□□□□□ -1.81
CMC1-205ENST00000466830 HMCN2Q8NDA2 5059 aa3.72□□□□□ -1.81
CMC1-205ENST00000466830 SPRR2DP22532 72 aa3.67□□□□□ -1.82
CMC1-205ENST00000466830 KRTAP19-6Q3LI70 58 aa3.64□□□□□ -1.83
CMC1-205ENST00000466830 FSIP2Q5CZC0 6907 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms