RNA–Protein interactions for RNA: ENST00000466454.1

CLCA3P-202, Transcript of chloride channel accessory 3, pseudogene, humanhuman

TSL 1 (best) BASIC

Gene CLCA3P, Length 3,412 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3P-202ENST00000466454 SPATA8Q6RVD6 105 aa2.38□□□□□ -2.03
CLCA3P-202ENST00000466454 DNAH5Q8TE73 4624 aa2.38□□□□□ -2.03
CLCA3P-202ENST00000466454 PKD1P98161 4303 aa2.38□□□□□ -2.03
CLCA3P-202ENST00000466454 FLNBO75369 2602 aaKnown RBP2.37□□□□□ -2.03
CLCA3P-202ENST00000466454 PCOTHQ58A44 107 aa2.37□□□□□ -2.03
CLCA3P-202ENST00000466454 PRB2P02812 416 aaPredicted RBP2.37□□□□□ -2.03
CLCA3P-202ENST00000466454 SRRM2Q9UQ35 2752 aaKnown RBP2.36□□□□□ -2.03
CLCA3P-202ENST00000466454 UQCR11O14957 56 aa2.36□□□□□ -2.03
CLCA3P-202ENST00000466454 KRTAP13-2Q52LG2 175 aa2.35□□□□□ -2.03
CLCA3P-202ENST00000466454 PKHD1L1Q86WI1 4243 aa2.35□□□□□ -2.03
CLCA3P-202ENST00000466454 KRTAP1-4P0C5Y4 121 aa2.35□□□□□ -2.03
CLCA3P-202ENST00000466454 KMT2AQ03164 3969 aa2.34□□□□□ -2.03
CLCA3P-202ENST00000466454 NBEAL1Q6ZS30 2694 aa2.34□□□□□ -2.04
CLCA3P-202ENST00000466454 FAT2Q9NYQ8 4349 aa2.33□□□□□ -2.04
CLCA3P-202ENST00000466454 PKHD1P08F94 4074 aa2.33□□□□□ -2.04
CLCA3P-202ENST00000466454 STAB1Q9NY15 2570 aa2.32□□□□□ -2.04
CLCA3P-202ENST00000466454 SPINK1P00995 79 aa2.32□□□□□ -2.04
CLCA3P-202ENST00000466454 ANAPC11Q9NYG5 84 aa2.32□□□□□ -2.04
CLCA3P-202ENST00000466454 A0A1B0GU69 56 aa2.3□□□□□ -2.04
CLCA3P-202ENST00000466454 F8P00451 2351 aa2.3□□□□□ -2.04
CLCA3P-202ENST00000466454 STAB2Q8WWQ8 2551 aa2.3□□□□□ -2.04
CLCA3P-202ENST00000466454 LRP1BQ9NZR2 4599 aa2.29□□□□□ -2.04
CLCA3P-202ENST00000466454 APOBP04114 4563 aaKnown RBP2.28□□□□□ -2.04
CLCA3P-202ENST00000466454 LCE1AQ5T7P2 110 aa2.28□□□□□ -2.04
CLCA3P-202ENST00000466454 SPINK6Q6UWN8 80 aa2.28□□□□□ -2.04
CLCA3P-202ENST00000466454 VPS13BQ7Z7G8 4022 aa2.28□□□□□ -2.05
CLCA3P-202ENST00000466454 NOTCH1P46531 2555 aa2.27□□□□□ -2.05
CLCA3P-202ENST00000466454 COL6A5A8TX70 2615 aa2.27□□□□□ -2.05
CLCA3P-202ENST00000466454 LY6G6CO95867 125 aa2.27□□□□□ -2.05
CLCA3P-202ENST00000466454 KRTAP10-1P60331 282 aa2.27□□□□□ -2.05
CLCA3P-202ENST00000466454 MEGF8Q7Z7M0 2845 aa2.26□□□□□ -2.05
CLCA3P-202ENST00000466454 KRTAP10-4P60372 401 aaPredicted RBP2.24□□□□□ -2.05
CLCA3P-202ENST00000466454 HSPG2P98160 4391 aa2.24□□□□□ -2.05
CLCA3P-202ENST00000466454 TNXBP22105 4242 aa2.24□□□□□ -2.05
CLCA3P-202ENST00000466454 KRTAP21-3Q3LHN1 58 aa2.23□□□□□ -2.05
CLCA3P-202ENST00000466454 MUC5BQ9HC84 5762 aaPredicted RBP2.23□□□□□ -2.05
CLCA3P-202ENST00000466454 H0YAA0 97 aa2.21□□□□□ -2.05
CLCA3P-202ENST00000466454 INE1O15225 51 aa2.21□□□□□ -2.05
CLCA3P-202ENST00000466454 KRTAP2-2Q9BYT5 123 aa2.21□□□□□ -2.05
CLCA3P-202ENST00000466454 DYNC1H1Q14204 4646 aaKnown RBP2.21□□□□□ -2.06
CLCA3P-202ENST00000466454 A0A1B0GVY2 172 aa2.21□□□□□ -2.06
CLCA3P-202ENST00000466454 MGAM2Q2M2H8 2515 aa2.2□□□□□ -2.06
CLCA3P-202ENST00000466454 H1FX-AS1Q4G0G2 97 aa2.2□□□□□ -2.06
CLCA3P-202ENST00000466454 LCE1FQ5T754 118 aa2.2□□□□□ -2.06
CLCA3P-202ENST00000466454 HYDINQ4G0P3 5121 aa2.2□□□□□ -2.06
CLCA3P-202ENST00000466454 COX6B2Q6YFQ2 88 aa2.19□□□□□ -2.06
CLCA3P-202ENST00000466454 FAT1Q14517 4588 aa2.18□□□□□ -2.06
CLCA3P-202ENST00000466454 TGP01266 2768 aa2.18□□□□□ -2.06
CLCA3P-202ENST00000466454 FAT3Q8TDW7 4589 aa2.17□□□□□ -2.06
CLCA3P-202ENST00000466454 LRP1Q07954 4544 aaKnown RBP2.16□□□□□ -2.06
CLCA3P-202ENST00000466454 KRTAP10-6P60371 365 aaPredicted RBP2.15□□□□□ -2.06
CLCA3P-202ENST00000466454 DNHD1Q96M86 4753 aa2.15□□□□□ -2.07
CLCA3P-202ENST00000466454 CRIPTQ9P021 101 aa2.14□□□□□ -2.07
CLCA3P-202ENST00000466454 RPL37P61927 97 aaKnown RBP2.13□□□□□ -2.07
CLCA3P-202ENST00000466454 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.12□□□□□ -2.07
CLCA3P-202ENST00000466454 LCE3CQ5T5A8 94 aa2.12□□□□□ -2.07
CLCA3P-202ENST00000466454 PLAC4Q8WY50 150 aa2.11□□□□□ -2.07
CLCA3P-202ENST00000466454 RYR2Q92736 4967 aa2.1□□□□□ -2.07
CLCA3P-202ENST00000466454 C9orf92A6NGG3 77 aa2.09□□□□□ -2.07
CLCA3P-202ENST00000466454 KRTAP13-4Q3LI77 160 aa2.08□□□□□ -2.08
CLCA3P-202ENST00000466454 FLG2Q5D862 2391 aaPredicted RBP2.07□□□□□ -2.08
CLCA3P-202ENST00000466454 KRTAP12-2P59991 146 aa2.07□□□□□ -2.08
CLCA3P-202ENST00000466454 S4R3F8 94 aa2.07□□□□□ -2.08
CLCA3P-202ENST00000466454 MYCBP2O75592 4640 aa2.06□□□□□ -2.08
CLCA3P-202ENST00000466454 M0QZ58 72 aa2.05□□□□□ -2.08
CLCA3P-202ENST00000466454 SMR3BP02814 79 aaPredicted RBP2.04□□□□□ -2.08
CLCA3P-202ENST00000466454 PP632Q6XCG6 107 aa2.04□□□□□ -2.08
CLCA3P-202ENST00000466454 MT1HL1P0DM35 61 aa2.04□□□□□ -2.08
CLCA3P-202ENST00000466454 KRTAP12-1P59990 96 aa2.03□□□□□ -2.08
CLCA3P-202ENST00000466454 RYR1P21817 5038 aa2.03□□□□□ -2.09
CLCA3P-202ENST00000466454 MUC17Q685J3 4493 aa2.01□□□□□ -2.09
CLCA3P-202ENST00000466454 Q5VSD8 79 aa2□□□□□ -2.09
CLCA3P-202ENST00000466454 C10orf95Q9H7T3 257 aa1.98□□□□□ -2.09
CLCA3P-202ENST00000466454 LCE3EQ5T5B0 92 aa1.97□□□□□ -2.09
CLCA3P-202ENST00000466454 KRTAP19-2Q3LHN2 52 aa1.96□□□□□ -2.1
CLCA3P-202ENST00000466454 KMT2CQ8NEZ4 4911 aaKnown RBP1.95□□□□□ -2.1
CLCA3P-202ENST00000466454 KRTAP10-12P60413 245 aa1.95□□□□□ -2.1
CLCA3P-202ENST00000466454 A0A0D9SG42 100 aa1.94□□□□□ -2.1
CLCA3P-202ENST00000466454 RYR3Q15413 4870 aa1.93□□□□□ -2.1
CLCA3P-202ENST00000466454 FLGP20930 4061 aaPredicted RBP1.92□□□□□ -2.1
CLCA3P-202ENST00000466454 LCE1EQ5T753 118 aa1.91□□□□□ -2.1
CLCA3P-202ENST00000466454 LPAP08519 4548 aa1.91□□□□□ -2.1
CLCA3P-202ENST00000466454 HERC1Q15751 4861 aa1.91□□□□□ -2.1
CLCA3P-202ENST00000466454 MT3P25713 68 aa1.9□□□□□ -2.1
CLCA3P-202ENST00000466454 LRP2P98164 4655 aa1.9□□□□□ -2.11
CLCA3P-202ENST00000466454 KRTAP5-9P26371 169 aa1.9□□□□□ -2.11
CLCA3P-202ENST00000466454 SPRR5A0A1B0GTR4 108 aa1.89□□□□□ -2.11
CLCA3P-202ENST00000466454 KRTAP4-1Q9BYQ7 146 aa1.87□□□□□ -2.11
CLCA3P-202ENST00000466454 DMBT1Q9UGM3 2413 aaPredicted RBP1.86□□□□□ -2.11
CLCA3P-202ENST00000466454 KIAA1109Q2LD37 5005 aa1.84□□□□□ -2.11
CLCA3P-202ENST00000466454 BIRC6Q9NR09 4857 aa1.84□□□□□ -2.12
CLCA3P-202ENST00000466454 KRTAP10-10P60014 251 aa1.83□□□□□ -2.12
CLCA3P-202ENST00000466454 KRTAP6-3Q3LI67 103 aa1.83□□□□□ -2.12
CLCA3P-202ENST00000466454 ABCA13Q86UQ4 5058 aa1.82□□□□□ -2.12
CLCA3P-202ENST00000466454 SPRR2GQ9BYE4 73 aa1.81□□□□□ -2.12
CLCA3P-202ENST00000466454 EPPK1P58107 5090 aaKnown RBP1.8□□□□□ -2.12
CLCA3P-202ENST00000466454 KRTAP10-5P60370 271 aa1.78□□□□□ -2.12
CLCA3P-202ENST00000466454 HERC2O95714 4834 aa1.78□□□□□ -2.12
CLCA3P-202ENST00000466454 TNP1P09430 55 aa1.78□□□□□ -2.12
CLCA3P-202ENST00000466454 KRTAP5-4Q6L8H1 288 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms