RNA–Protein interactions for RNA: ENST00000465213.1

VPS8-217, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 656 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-217ENST00000465213 TRRAPQ9Y4A5 3859 aa1.54□□□□□ -2.16
VPS8-217ENST00000465213 H0YAA0 97 aa1.53□□□□□ -2.16
VPS8-217ENST00000465213 SPRR1AP35321 89 aa1.53□□□□□ -2.16
VPS8-217ENST00000465213 A0A0D9SG42 100 aa1.52□□□□□ -2.17
VPS8-217ENST00000465213 MINOS1Q5TGZ0 78 aa1.52□□□□□ -2.17
VPS8-217ENST00000465213 ZNF469Q96JG9 3925 aaPredicted RBP1.51□□□□□ -2.17
VPS8-217ENST00000465213 PLCE1Q9P212 2302 aa1.5□□□□□ -2.17
VPS8-217ENST00000465213 HMCN1Q96RW7 5635 aa1.5□□□□□ -2.17
VPS8-217ENST00000465213 ROS1P08922 2347 aa1.5□□□□□ -2.17
VPS8-217ENST00000465213 DEFB105AQ8NG35 78 aa1.49□□□□□ -2.17
VPS8-217ENST00000465213 C6orf48Q9UBA6 75 aa1.49□□□□□ -2.17
VPS8-217ENST00000465213 PKDREJQ9NTG1 2253 aa1.49□□□□□ -2.17
VPS8-217ENST00000465213 KMT2DO14686 5537 aa1.48□□□□□ -2.17
VPS8-217ENST00000465213 SMIM2Q9BVW6 85 aa1.48□□□□□ -2.17
VPS8-217ENST00000465213 KNL1Q8NG31 2342 aa1.48□□□□□ -2.17
VPS8-217ENST00000465213 FAT3Q8TDW7 4589 aa1.47□□□□□ -2.17
VPS8-217ENST00000465213 CMYA5Q8N3K9 4069 aa1.47□□□□□ -2.17
VPS8-217ENST00000465213 SPRR1BP22528 89 aa1.47□□□□□ -2.17
VPS8-217ENST00000465213 H1FX-AS1Q4G0G2 97 aa1.47□□□□□ -2.17
VPS8-217ENST00000465213 APLNQ9ULZ1 77 aa1.47□□□□□ -2.17
VPS8-217ENST00000465213 PRB3Q04118 309 aaPredicted RBP1.46□□□□□ -2.18
VPS8-217ENST00000465213 LELP1Q5T871 98 aa1.46□□□□□ -2.18
VPS8-217ENST00000465213 WFDC13Q8IUB5 93 aa1.46□□□□□ -2.18
VPS8-217ENST00000465213 PKHD1P08F94 4074 aa1.45□□□□□ -2.18
VPS8-217ENST00000465213 IAPPP10997 89 aa1.45□□□□□ -2.18
VPS8-217ENST00000465213 USF3Q68DE3 2245 aa1.45□□□□□ -2.18
VPS8-217ENST00000465213 KMT2AQ03164 3969 aa1.44□□□□□ -2.18
VPS8-217ENST00000465213 KRTAP10-4P60372 401 aaPredicted RBP1.44□□□□□ -2.18
VPS8-217ENST00000465213 AKAP6Q13023 2319 aa1.44□□□□□ -2.18
VPS8-217ENST00000465213 MUC5BQ9HC84 5762 aaPredicted RBP1.44□□□□□ -2.18
VPS8-217ENST00000465213 WNK2Q9Y3S1 2297 aa1.43□□□□□ -2.18
VPS8-217ENST00000465213 NDUFA1O15239 70 aa1.43□□□□□ -2.18
VPS8-217ENST00000465213 RPS27P42677 84 aaKnown RBP1.42□□□□□ -2.18
VPS8-217ENST00000465213 RPS27LQ71UM5 84 aaKnown RBP1.42□□□□□ -2.18
VPS8-217ENST00000465213 AHNAKQ09666 5890 aaKnown RBP1.42□□□□□ -2.18
VPS8-217ENST00000465213 HECTD4Q9Y4D8 3996 aa1.42□□□□□ -2.18
VPS8-217ENST00000465213 DEFB130BP0DP73 79 aa1.41□□□□□ -2.18
VPS8-217ENST00000465213 DEFB130AP0DP74 79 aa1.41□□□□□ -2.18
VPS8-217ENST00000465213 TFF3Q07654 80 aa1.41□□□□□ -2.18
VPS8-217ENST00000465213 FRAS1Q86XX4 4008 aa1.41□□□□□ -2.18
VPS8-217ENST00000465213 MYCBP2O75592 4640 aa1.37□□□□□ -2.19
VPS8-217ENST00000465213 HSPG2P98160 4391 aa1.37□□□□□ -2.19
VPS8-217ENST00000465213 H3BUA1 57 aa1.36□□□□□ -2.19
VPS8-217ENST00000465213 KRTAP2-3P0C7H8 128 aa1.36□□□□□ -2.19
VPS8-217ENST00000465213 WT1-ASQ06250 92 aa1.36□□□□□ -2.19
VPS8-217ENST00000465213 KRTAP2-4Q9BYR9 128 aa1.36□□□□□ -2.19
VPS8-217ENST00000465213 LRP2P98164 4655 aa1.36□□□□□ -2.19
VPS8-217ENST00000465213 USH2AO75445 5202 aa1.36□□□□□ -2.19
VPS8-217ENST00000465213 ANK3Q12955 4377 aaKnown RBP1.35□□□□□ -2.19
VPS8-217ENST00000465213 DNAH9Q9NYC9 4486 aa1.34□□□□□ -2.19
VPS8-217ENST00000465213 KLK9Q2XQG4 91 aa1.34□□□□□ -2.19
VPS8-217ENST00000465213 DYNC1H1Q14204 4646 aaKnown RBP1.33□□□□□ -2.2
VPS8-217ENST00000465213 PLECQ15149 4684 aaKnown RBP1.33□□□□□ -2.2
VPS8-217ENST00000465213 LYSTQ99698 3801 aa1.33□□□□□ -2.2
VPS8-217ENST00000465213 MDN1Q9NU22 5596 aa1.32□□□□□ -2.2
VPS8-217ENST00000465213 FAT2Q9NYQ8 4349 aa1.32□□□□□ -2.2
VPS8-217ENST00000465213 IGLV5-48A0A075B6I7 105 aa1.31□□□□□ -2.2
VPS8-217ENST00000465213 LRP1BQ9NZR2 4599 aa1.31□□□□□ -2.2
VPS8-217ENST00000465213 DSTQ03001 7570 aaKnown RBP1.31□□□□□ -2.2
VPS8-217ENST00000465213 MUC12Q9UKN1 5478 aa1.3□□□□□ -2.2
VPS8-217ENST00000465213 DEFB131AP59861 70 aa1.3□□□□□ -2.2
VPS8-217ENST00000465213 KRTAP5-10Q6L8G5 202 aa1.3□□□□□ -2.2
VPS8-217ENST00000465213 WFDC10BQ8IUB3 73 aa1.3□□□□□ -2.2
VPS8-217ENST00000465213 DNAH7Q8WXX0 4024 aa1.3□□□□□ -2.2
VPS8-217ENST00000465213 FAT1Q14517 4588 aa1.29□□□□□ -2.2
VPS8-217ENST00000465213 CSMD3Q7Z407 3707 aa1.28□□□□□ -2.2
VPS8-217ENST00000465213 HUWE1Q7Z6Z7 4374 aaKnown RBP1.28□□□□□ -2.2
VPS8-217ENST00000465213 KRTAP2-1Q9BYU5 128 aa1.28□□□□□ -2.2
VPS8-217ENST00000465213 DEFB109BQ30KR1 87 aa1.27□□□□□ -2.21
VPS8-217ENST00000465213 KAAG1Q9UBP8 84 aa1.27□□□□□ -2.21
VPS8-217ENST00000465213 S4R3F8 94 aa1.27□□□□□ -2.21
VPS8-217ENST00000465213 MUC5ACP98088 5654 aa1.26□□□□□ -2.21
VPS8-217ENST00000465213 LRP1Q07954 4544 aaKnown RBP1.25□□□□□ -2.21
VPS8-217ENST00000465213 DNAH10Q8IVF4 4471 aa1.25□□□□□ -2.21
VPS8-217ENST00000465213 PKHD1L1Q86WI1 4243 aa1.25□□□□□ -2.21
VPS8-217ENST00000465213 DNAH11Q96DT5 4516 aa1.25□□□□□ -2.21
VPS8-217ENST00000465213 MMP24-AS1A0A0U1RRL7 71 aa1.23□□□□□ -2.21
VPS8-217ENST00000465213 POLR2KP53803 58 aaKnown RBP1.23□□□□□ -2.21
VPS8-217ENST00000465213 PRLHP81277 87 aa1.22□□□□□ -2.21
VPS8-217ENST00000465213 DEFB106AQ8N104 65 aa1.22□□□□□ -2.21
VPS8-217ENST00000465213 NOP10Q9NPE3 64 aaKnown RBP1.22□□□□□ -2.21
VPS8-217ENST00000465213 Q9Y3F1 56 aa1.2□□□□□ -2.22
VPS8-217ENST00000465213 APOBP04114 4563 aaKnown RBP1.2□□□□□ -2.22
VPS8-217ENST00000465213 PKD1P98161 4303 aa1.19□□□□□ -2.22
VPS8-217ENST00000465213 SPINK6Q6UWN8 80 aa1.17□□□□□ -2.22
VPS8-217ENST00000465213 VPS13DQ5THJ4 4388 aa1.17□□□□□ -2.22
VPS8-217ENST00000465213 DNAH5Q8TE73 4624 aa1.16□□□□□ -2.22
VPS8-217ENST00000465213 STARD9Q9P2P6 4700 aa1.16□□□□□ -2.22
VPS8-217ENST00000465213 RPL39P62891 51 aaKnown RBP1.15□□□□□ -2.23
VPS8-217ENST00000465213 DNAH6Q9C0G6 4158 aa1.14□□□□□ -2.23
VPS8-217ENST00000465213 H0YGG7 62 aa1.13□□□□□ -2.23
VPS8-217ENST00000465213 ARHGAP5-AS1Q96IT6 56 aa1.13□□□□□ -2.23
VPS8-217ENST00000465213 A8MTW9 85 aa1.11□□□□□ -2.23
VPS8-217ENST00000465213 DEFB135Q30KP9 77 aa1.11□□□□□ -2.23
VPS8-217ENST00000465213 M0QY20 66 aa1.1□□□□□ -2.23
VPS8-217ENST00000465213 SPINK1P00995 79 aa1.1□□□□□ -2.23
VPS8-217ENST00000465213 RPL39LQ96EH5 51 aaKnown RBP1.1□□□□□ -2.23
VPS8-217ENST00000465213 DNAH3Q8TD57 4116 aa1.09□□□□□ -2.23
VPS8-217ENST00000465213 M0R2T5 61 aa1.08□□□□□ -2.24
VPS8-217ENST00000465213 CLPSL2Q6UWE3 100 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms