RNA–Protein interactions for RNA: ENST00000462309.1

COL4A2-203, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 3

Gene COL4A2, Length 725 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-203ENST00000462309 ACYP2P14621 99 aa3.13□□□□□ -1.91
COL4A2-203ENST00000462309 LINC00472Q9H8W2 130 aa3.13□□□□□ -1.91
COL4A2-203ENST00000462309 DEFB135Q30KP9 77 aa3.12□□□□□ -1.91
COL4A2-203ENST00000462309 MMP24-AS1A0A0U1RRL7 71 aa3.11□□□□□ -1.91
COL4A2-203ENST00000462309 HTN3P15516 51 aa3.11□□□□□ -1.91
COL4A2-203ENST00000462309 SPAG11AQ6PDA7 123 aa3.11□□□□□ -1.91
COL4A2-203ENST00000462309 UQCR11O14957 56 aa3.09□□□□□ -1.91
COL4A2-203ENST00000462309 SPATA8Q6RVD6 105 aa3.09□□□□□ -1.91
COL4A2-203ENST00000462309 MEGF8Q7Z7M0 2845 aa3.08□□□□□ -1.92
COL4A2-203ENST00000462309 DNAH3Q8TD57 4116 aa3.08□□□□□ -1.92
COL4A2-203ENST00000462309 A0A1B0GU69 56 aa3.08□□□□□ -1.92
COL4A2-203ENST00000462309 NUPR2A6NF83 97 aa3.08□□□□□ -1.92
COL4A2-203ENST00000462309 MRPL34Q9BQ48 92 aaKnown RBP3.08□□□□□ -1.92
COL4A2-203ENST00000462309 TGP01266 2768 aa3.07□□□□□ -1.92
COL4A2-203ENST00000462309 SPINK7P58062 85 aa3.07□□□□□ -1.92
COL4A2-203ENST00000462309 PCOTHQ58A44 107 aa3.07□□□□□ -1.92
COL4A2-203ENST00000462309 DMAC1Q96GE9 116 aa3.07□□□□□ -1.92
COL4A2-203ENST00000462309 PRKDCP78527 4128 aaKnown RBP3.07□□□□□ -1.92
COL4A2-203ENST00000462309 KRTAP12-1P59990 96 aa3.05□□□□□ -1.92
COL4A2-203ENST00000462309 DEFB4AO15263 64 aa3.04□□□□□ -1.92
COL4A2-203ENST00000462309 KRTAP13-4Q3LI77 160 aa3.04□□□□□ -1.92
COL4A2-203ENST00000462309 STAB2Q8WWQ8 2551 aa3.02□□□□□ -1.93
COL4A2-203ENST00000462309 KRTAP12-4P60329 112 aa3.02□□□□□ -1.93
COL4A2-203ENST00000462309 Q6ZRN7 208 aaPredicted RBP3.02□□□□□ -1.93
COL4A2-203ENST00000462309 DNAH9Q9NYC9 4486 aa3.01□□□□□ -1.93
COL4A2-203ENST00000462309 PRLHP81277 87 aa3.01□□□□□ -1.93
COL4A2-203ENST00000462309 TENM3Q9P273 2699 aa3□□□□□ -1.93
COL4A2-203ENST00000462309 COL7A1Q02388 2944 aa2.99□□□□□ -1.93
COL4A2-203ENST00000462309 Q96NJ1 140 aa2.99□□□□□ -1.93
COL4A2-203ENST00000462309 HUWE1Q7Z6Z7 4374 aaKnown RBP2.98□□□□□ -1.93
COL4A2-203ENST00000462309 NBEAL2Q6ZNJ1 2754 aa2.98□□□□□ -1.93
COL4A2-203ENST00000462309 A0A096LNI7 61 aa2.97□□□□□ -1.93
COL4A2-203ENST00000462309 TENM2Q9NT68 2774 aa2.95□□□□□ -1.94
COL4A2-203ENST00000462309 MUC19Q7Z5P9 8384 aa2.95□□□□□ -1.94
COL4A2-203ENST00000462309 INE1O15225 51 aa2.95□□□□□ -1.94
COL4A2-203ENST00000462309 LY6G6CO95867 125 aa2.94□□□□□ -1.94
COL4A2-203ENST00000462309 SSBP3-AS1Q7Z2R9 100 aa2.94□□□□□ -1.94
COL4A2-203ENST00000462309 DNAH7Q8WXX0 4024 aa2.92□□□□□ -1.94
COL4A2-203ENST00000462309 APLNQ9ULZ1 77 aa2.92□□□□□ -1.94
COL4A2-203ENST00000462309 CSMD3Q7Z407 3707 aa2.9□□□□□ -1.94
COL4A2-203ENST00000462309 UBE2DNLQ8IWF7 75 aa2.89□□□□□ -1.95
COL4A2-203ENST00000462309 NBDYA0A0U1RRE5 68 aa2.88□□□□□ -1.95
COL4A2-203ENST00000462309 DYNC2H1Q8NCM8 4307 aaKnown RBP2.87□□□□□ -1.95
COL4A2-203ENST00000462309 STARD9Q9P2P6 4700 aa2.86□□□□□ -1.95
COL4A2-203ENST00000462309 DNAH1Q9P2D7 4330 aa2.85□□□□□ -1.95
COL4A2-203ENST00000462309 LYSTQ99698 3801 aa2.85□□□□□ -1.95
COL4A2-203ENST00000462309 KMT2CQ8NEZ4 4911 aaKnown RBP2.85□□□□□ -1.95
COL4A2-203ENST00000462309 COX6B2Q6YFQ2 88 aa2.85□□□□□ -1.95
COL4A2-203ENST00000462309 SPINK6Q6UWN8 80 aa2.84□□□□□ -1.95
COL4A2-203ENST00000462309 KMT2AQ03164 3969 aa2.84□□□□□ -1.96
COL4A2-203ENST00000462309 SACSQ9NZJ4 4579 aa2.83□□□□□ -1.96
COL4A2-203ENST00000462309 PLECQ15149 4684 aaKnown RBP2.82□□□□□ -1.96
COL4A2-203ENST00000462309 ALMS1Q8TCU4 4167 aa2.82□□□□□ -1.96
COL4A2-203ENST00000462309 KRTAP5-7Q6L8G8 165 aa2.82□□□□□ -1.96
COL4A2-203ENST00000462309 RPS29P62273 56 aaKnown RBP2.81□□□□□ -1.96
COL4A2-203ENST00000462309 H1FX-AS1Q4G0G2 97 aa2.81□□□□□ -1.96
COL4A2-203ENST00000462309 DNAH6Q9C0G6 4158 aa2.8□□□□□ -1.96
COL4A2-203ENST00000462309 VPS13DQ5THJ4 4388 aa2.79□□□□□ -1.96
COL4A2-203ENST00000462309 H0YAA0 97 aa2.79□□□□□ -1.96
COL4A2-203ENST00000462309 Q6ZSA8 131 aa2.79□□□□□ -1.96
COL4A2-203ENST00000462309 A0A087WTM6 91 aa2.78□□□□□ -1.96
COL4A2-203ENST00000462309 RYR3Q15413 4870 aa2.77□□□□□ -1.97
COL4A2-203ENST00000462309 SPINK1P00995 79 aa2.77□□□□□ -1.97
COL4A2-203ENST00000462309 RYR2Q92736 4967 aa2.77□□□□□ -1.97
COL4A2-203ENST00000462309 DNAH10Q8IVF4 4471 aa2.75□□□□□ -1.97
COL4A2-203ENST00000462309 RPL37P61927 97 aaKnown RBP2.75□□□□□ -1.97
COL4A2-203ENST00000462309 DNAH17Q9UFH2 4485 aa2.75□□□□□ -1.97
COL4A2-203ENST00000462309 HYDINQ4G0P3 5121 aa2.75□□□□□ -1.97
COL4A2-203ENST00000462309 CRIPTQ9P021 101 aa2.73□□□□□ -1.97
COL4A2-203ENST00000462309 FRAS1Q86XX4 4008 aa2.72□□□□□ -1.97
COL4A2-203ENST00000462309 FAT2Q9NYQ8 4349 aa2.71□□□□□ -1.98
COL4A2-203ENST00000462309 DNAH2Q9P225 4427 aa2.71□□□□□ -1.98
COL4A2-203ENST00000462309 BIRC6Q9NR09 4857 aa2.7□□□□□ -1.98
COL4A2-203ENST00000462309 DNAH11Q96DT5 4516 aa2.69□□□□□ -1.98
COL4A2-203ENST00000462309 HECTD4Q9Y4D8 3996 aa2.68□□□□□ -1.98
COL4A2-203ENST00000462309 EPPK1P58107 5090 aaKnown RBP2.68□□□□□ -1.98
COL4A2-203ENST00000462309 PKD1P98161 4303 aa2.68□□□□□ -1.98
COL4A2-203ENST00000462309 HMCN1Q96RW7 5635 aa2.68□□□□□ -1.98
COL4A2-203ENST00000462309 DYNC1H1Q14204 4646 aaKnown RBP2.66□□□□□ -1.98
COL4A2-203ENST00000462309 PKHD1P08F94 4074 aa2.65□□□□□ -1.98
COL4A2-203ENST00000462309 LRP1BQ9NZR2 4599 aa2.65□□□□□ -1.99
COL4A2-203ENST00000462309 SMR3BP02814 79 aaPredicted RBP2.62□□□□□ -1.99
COL4A2-203ENST00000462309 HSPG2P98160 4391 aa2.62□□□□□ -1.99
COL4A2-203ENST00000462309 FLG2Q5D862 2391 aaPredicted RBP2.62□□□□□ -1.99
COL4A2-203ENST00000462309 DNAH5Q8TE73 4624 aa2.62□□□□□ -1.99
COL4A2-203ENST00000462309 KIAA1109Q2LD37 5005 aa2.61□□□□□ -1.99
COL4A2-203ENST00000462309 HERC2O95714 4834 aa2.61□□□□□ -1.99
COL4A2-203ENST00000462309 KRTAP10-4P60372 401 aaPredicted RBP2.61□□□□□ -1.99
COL4A2-203ENST00000462309 Q5VSD8 79 aa2.61□□□□□ -1.99
COL4A2-203ENST00000462309 M0QZ58 72 aa2.6□□□□□ -1.99
COL4A2-203ENST00000462309 DNAH8Q96JB1 4490 aa2.6□□□□□ -1.99
COL4A2-203ENST00000462309 APOBP04114 4563 aaKnown RBP2.59□□□□□ -1.99
COL4A2-203ENST00000462309 S4R3F8 94 aa2.59□□□□□ -1.99
COL4A2-203ENST00000462309 RYR1P21817 5038 aa2.58□□□□□ -2
COL4A2-203ENST00000462309 VPS13BQ7Z7G8 4022 aa2.56□□□□□ -2
COL4A2-203ENST00000462309 DMBT1Q9UGM3 2413 aaPredicted RBP2.56□□□□□ -2
COL4A2-203ENST00000462309 FAT1Q14517 4588 aa2.55□□□□□ -2
COL4A2-203ENST00000462309 SRRM2Q9UQ35 2752 aaKnown RBP2.53□□□□□ -2
COL4A2-203ENST00000462309 A0A0D9SG42 100 aa2.53□□□□□ -2
COL4A2-203ENST00000462309 PCLOQ9Y6V0 5065 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms