RNA–Protein interactions for RNA: ENST00000461766.1

CDHR3-202, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 536 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-202ENST00000461766 KRTAP2-2Q9BYT5 123 aa2.83□□□□□ -1.96
CDHR3-202ENST00000461766 DNAH9Q9NYC9 4486 aa2.83□□□□□ -1.96
CDHR3-202ENST00000461766 SACSQ9NZJ4 4579 aa2.83□□□□□ -1.96
CDHR3-202ENST00000461766 STAB2Q8WWQ8 2551 aa2.83□□□□□ -1.96
CDHR3-202ENST00000461766 DNAH3Q8TD57 4116 aa2.82□□□□□ -1.96
CDHR3-202ENST00000461766 NDUFAF8A1L188 74 aa2.81□□□□□ -1.96
CDHR3-202ENST00000461766 RPS29P62273 56 aaKnown RBP2.81□□□□□ -1.96
CDHR3-202ENST00000461766 KRTAP13-2Q52LG2 175 aa2.81□□□□□ -1.96
CDHR3-202ENST00000461766 ALMS1Q8TCU4 4167 aa2.81□□□□□ -1.96
CDHR3-202ENST00000461766 DYNC2H1Q8NCM8 4307 aaKnown RBP2.81□□□□□ -1.96
CDHR3-202ENST00000461766 COL7A1Q02388 2944 aa2.8□□□□□ -1.96
CDHR3-202ENST00000461766 DNAH1Q9P2D7 4330 aa2.8□□□□□ -1.96
CDHR3-202ENST00000461766 TYMSOSQ8TAI1 123 aa2.79□□□□□ -1.96
CDHR3-202ENST00000461766 RYR1P21817 5038 aa2.78□□□□□ -1.96
CDHR3-202ENST00000461766 STARD9Q9P2P6 4700 aa2.77□□□□□ -1.97
CDHR3-202ENST00000461766 COX6B2Q6YFQ2 88 aa2.77□□□□□ -1.97
CDHR3-202ENST00000461766 KIAA1109Q2LD37 5005 aa2.77□□□□□ -1.97
CDHR3-202ENST00000461766 P0C880 135 aa2.76□□□□□ -1.97
CDHR3-202ENST00000461766 KRTAP10-6P60371 365 aaPredicted RBP2.76□□□□□ -1.97
CDHR3-202ENST00000461766 HUWE1Q7Z6Z7 4374 aaKnown RBP2.75□□□□□ -1.97
CDHR3-202ENST00000461766 KRTAP1-4P0C5Y4 121 aa2.75□□□□□ -1.97
CDHR3-202ENST00000461766 C20orf166-AS1Q96NR2 134 aa2.75□□□□□ -1.97
CDHR3-202ENST00000461766 RPL37P61927 97 aaKnown RBP2.74□□□□□ -1.97
CDHR3-202ENST00000461766 ABCA13Q86UQ4 5058 aa2.73□□□□□ -1.97
CDHR3-202ENST00000461766 SPINT4Q6UDR6 99 aa2.73□□□□□ -1.97
CDHR3-202ENST00000461766 DNAH7Q8WXX0 4024 aa2.72□□□□□ -1.97
CDHR3-202ENST00000461766 KRTAP5-11Q6L8G4 156 aa2.72□□□□□ -1.97
CDHR3-202ENST00000461766 LYSTQ99698 3801 aa2.72□□□□□ -1.97
CDHR3-202ENST00000461766 CSMD3Q7Z407 3707 aa2.71□□□□□ -1.97
CDHR3-202ENST00000461766 SRRM2Q9UQ35 2752 aaKnown RBP2.71□□□□□ -1.98
CDHR3-202ENST00000461766 PLECQ15149 4684 aaKnown RBP2.7□□□□□ -1.98
CDHR3-202ENST00000461766 LCE1EQ5T753 118 aa2.7□□□□□ -1.98
CDHR3-202ENST00000461766 FRAS1Q86XX4 4008 aa2.69□□□□□ -1.98
CDHR3-202ENST00000461766 CRIPTQ9P021 101 aa2.69□□□□□ -1.98
CDHR3-202ENST00000461766 TPRXLQ17RH7 258 aa2.68□□□□□ -1.98
CDHR3-202ENST00000461766 KRTAP10-1P60331 282 aa2.66□□□□□ -1.98
CDHR3-202ENST00000461766 KMT2AQ03164 3969 aa2.65□□□□□ -1.99
CDHR3-202ENST00000461766 HECTD4Q9Y4D8 3996 aa2.65□□□□□ -1.99
CDHR3-202ENST00000461766 C9orf92A6NGG3 77 aa2.64□□□□□ -1.99
CDHR3-202ENST00000461766 HERC1Q15751 4861 aa2.64□□□□□ -1.99
CDHR3-202ENST00000461766 LCE1FQ5T754 118 aa2.63□□□□□ -1.99
CDHR3-202ENST00000461766 S4R3F8 94 aa2.63□□□□□ -1.99
CDHR3-202ENST00000461766 UBR4Q5T4S7 5183 aa2.63□□□□□ -1.99
CDHR3-202ENST00000461766 KRTAP13-4Q3LI77 160 aa2.62□□□□□ -1.99
CDHR3-202ENST00000461766 A0A0D9SG42 100 aa2.61□□□□□ -1.99
CDHR3-202ENST00000461766 A0A1B0GVY2 172 aa2.61□□□□□ -1.99
CDHR3-202ENST00000461766 DNAH10Q8IVF4 4471 aa2.61□□□□□ -1.99
CDHR3-202ENST00000461766 DNAH11Q96DT5 4516 aa2.6□□□□□ -1.99
CDHR3-202ENST00000461766 PKHD1P08F94 4074 aa2.6□□□□□ -1.99
CDHR3-202ENST00000461766 VPS13DQ5THJ4 4388 aa2.6□□□□□ -1.99
CDHR3-202ENST00000461766 DYNC1H1Q14204 4646 aaKnown RBP2.59□□□□□ -1.99
CDHR3-202ENST00000461766 C10orf95Q9H7T3 257 aa2.59□□□□□ -1.99
CDHR3-202ENST00000461766 FAT2Q9NYQ8 4349 aa2.59□□□□□ -2
CDHR3-202ENST00000461766 DNAH2Q9P225 4427 aa2.59□□□□□ -2
CDHR3-202ENST00000461766 M0QZ58 72 aa2.57□□□□□ -2
CDHR3-202ENST00000461766 KRTAP12-1P59990 96 aa2.57□□□□□ -2
CDHR3-202ENST00000461766 KRTAP12-2P59991 146 aa2.57□□□□□ -2
CDHR3-202ENST00000461766 HSPG2P98160 4391 aa2.57□□□□□ -2
CDHR3-202ENST00000461766 LRP1BQ9NZR2 4599 aa2.53□□□□□ -2
CDHR3-202ENST00000461766 DNAH8Q96JB1 4490 aa2.53□□□□□ -2
CDHR3-202ENST00000461766 KRTAP10-12P60413 245 aa2.53□□□□□ -2
CDHR3-202ENST00000461766 DMBT1Q9UGM3 2413 aaPredicted RBP2.53□□□□□ -2
CDHR3-202ENST00000461766 FLG2Q5D862 2391 aaPredicted RBP2.52□□□□□ -2.01
CDHR3-202ENST00000461766 LUZP6Q538Z0 58 aa2.52□□□□□ -2.01
CDHR3-202ENST00000461766 APOBP04114 4563 aaKnown RBP2.52□□□□□ -2.01
CDHR3-202ENST00000461766 DNAH6Q9C0G6 4158 aa2.52□□□□□ -2.01
CDHR3-202ENST00000461766 DNAH5Q8TE73 4624 aa2.51□□□□□ -2.01
CDHR3-202ENST00000461766 KRTAP10-4P60372 401 aaPredicted RBP2.51□□□□□ -2.01
CDHR3-202ENST00000461766 HMCN2Q8NDA2 5059 aa2.5□□□□□ -2.01
CDHR3-202ENST00000461766 DNAH17Q9UFH2 4485 aa2.5□□□□□ -2.01
CDHR3-202ENST00000461766 PKD1P98161 4303 aa2.5□□□□□ -2.01
CDHR3-202ENST00000461766 MYCBP2O75592 4640 aa2.5□□□□□ -2.01
CDHR3-202ENST00000461766 PLAC4Q8WY50 150 aa2.49□□□□□ -2.01
CDHR3-202ENST00000461766 PP632Q6XCG6 107 aa2.48□□□□□ -2.01
CDHR3-202ENST00000461766 KRTAP10-8P60410 259 aa2.47□□□□□ -2.01
CDHR3-202ENST00000461766 FAT1Q14517 4588 aa2.47□□□□□ -2.01
CDHR3-202ENST00000461766 SMR3BP02814 79 aaPredicted RBP2.46□□□□□ -2.02
CDHR3-202ENST00000461766 LCE3CQ5T5A8 94 aa2.44□□□□□ -2.02
CDHR3-202ENST00000461766 KRTAP5-1Q6L8H4 278 aa2.44□□□□□ -2.02
CDHR3-202ENST00000461766 KRTAP10-5P60370 271 aa2.43□□□□□ -2.02
CDHR3-202ENST00000461766 Q5VSD8 79 aa2.43□□□□□ -2.02
CDHR3-202ENST00000461766 R4GN34 69 aa2.42□□□□□ -2.02
CDHR3-202ENST00000461766 RNF213Q63HN8 5207 aa2.41□□□□□ -2.02
CDHR3-202ENST00000461766 KRTAP5-4Q6L8H1 288 aa2.4□□□□□ -2.03
CDHR3-202ENST00000461766 KRTAP5-9P26371 169 aa2.39□□□□□ -2.03
CDHR3-202ENST00000461766 VPS13BQ7Z7G8 4022 aa2.37□□□□□ -2.03
CDHR3-202ENST00000461766 LRP1Q07954 4544 aaKnown RBP2.36□□□□□ -2.03
CDHR3-202ENST00000461766 LRP2P98164 4655 aa2.36□□□□□ -2.03
CDHR3-202ENST00000461766 SPRR5A0A1B0GTR4 108 aa2.34□□□□□ -2.03
CDHR3-202ENST00000461766 CAMK2N1Q7Z7J9 78 aa2.33□□□□□ -2.04
CDHR3-202ENST00000461766 KRTAP4-4Q9BYR3 166 aa2.33□□□□□ -2.04
CDHR3-202ENST00000461766 MT1HL1P0DM35 61 aa2.31□□□□□ -2.04
CDHR3-202ENST00000461766 FAT3Q8TDW7 4589 aa2.3□□□□□ -2.04
CDHR3-202ENST00000461766 TNP1P09430 55 aa2.29□□□□□ -2.04
CDHR3-202ENST00000461766 FAT4Q6V0I7 4981 aa2.28□□□□□ -2.04
CDHR3-202ENST00000461766 PKHD1L1Q86WI1 4243 aa2.28□□□□□ -2.04
CDHR3-202ENST00000461766 PRO2289Q9P1D8 64 aa2.27□□□□□ -2.05
CDHR3-202ENST00000461766 INE1O15225 51 aa2.26□□□□□ -2.05
CDHR3-202ENST00000461766 MUC2Q02817 5179 aa2.26□□□□□ -2.05
CDHR3-202ENST00000461766 TNXBP22105 4242 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms