RNA–Protein interactions for RNA: ENST00000459752.5

PATJ-204, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene PATJ, Length 5,349 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-204ENST00000459752 KRTAP3-3Q9BYR6 98 aa3.82□□□□□ -1.8
PATJ-204ENST00000459752 KRTAP12-3P60328 96 aa3.8□□□□□ -1.8
PATJ-204ENST00000459752 VWFP04275 2813 aa3.8□□□□□ -1.8
PATJ-204ENST00000459752 CRCT1Q9UGL9 99 aa3.76□□□□□ -1.81
PATJ-204ENST00000459752 DNAH10Q8IVF4 4471 aa3.75□□□□□ -1.81
PATJ-204ENST00000459752 DNAH17Q9UFH2 4485 aa3.75□□□□□ -1.81
PATJ-204ENST00000459752 KRTAP10-4P60372 401 aaPredicted RBP3.73□□□□□ -1.81
PATJ-204ENST00000459752 PLECQ15149 4684 aaKnown RBP3.72□□□□□ -1.81
PATJ-204ENST00000459752 DNAH8Q96JB1 4490 aa3.72□□□□□ -1.81
PATJ-204ENST00000459752 SRRM2Q9UQ35 2752 aaKnown RBP3.72□□□□□ -1.81
PATJ-204ENST00000459752 PRKDCP78527 4128 aaKnown RBP3.72□□□□□ -1.81
PATJ-204ENST00000459752 FBN3Q75N90 2809 aa3.7□□□□□ -1.82
PATJ-204ENST00000459752 DNAH2Q9P225 4427 aa3.7□□□□□ -1.82
PATJ-204ENST00000459752 MEGF8Q7Z7M0 2845 aa3.7□□□□□ -1.82
PATJ-204ENST00000459752 LCE3AQ5TA76 89 aa3.69□□□□□ -1.82
PATJ-204ENST00000459752 STARD9Q9P2P6 4700 aa3.69□□□□□ -1.82
PATJ-204ENST00000459752 MT1HL1P0DM35 61 aa3.66□□□□□ -1.82
PATJ-204ENST00000459752 DNAH11Q96DT5 4516 aa3.65□□□□□ -1.82
PATJ-204ENST00000459752 DNHD1Q96M86 4753 aa3.63□□□□□ -1.83
PATJ-204ENST00000459752 KRTAP10-5P60370 271 aa3.63□□□□□ -1.83
PATJ-204ENST00000459752 PKHD1L1Q86WI1 4243 aa3.6□□□□□ -1.83
PATJ-204ENST00000459752 DYNC1H1Q14204 4646 aaKnown RBP3.6□□□□□ -1.83
PATJ-204ENST00000459752 FRAS1Q86XX4 4008 aa3.59□□□□□ -1.83
PATJ-204ENST00000459752 COL7A1Q02388 2944 aa3.59□□□□□ -1.84
PATJ-204ENST00000459752 FAT2Q9NYQ8 4349 aa3.58□□□□□ -1.84
PATJ-204ENST00000459752 RYR2Q92736 4967 aa3.54□□□□□ -1.84
PATJ-204ENST00000459752 SACSQ9NZJ4 4579 aa3.54□□□□□ -1.84
PATJ-204ENST00000459752 LORP23490 312 aaPredicted RBP3.53□□□□□ -1.84
PATJ-204ENST00000459752 LYSTQ99698 3801 aa3.53□□□□□ -1.84
PATJ-204ENST00000459752 DNAH5Q8TE73 4624 aa3.53□□□□□ -1.84
PATJ-204ENST00000459752 HECTD4Q9Y4D8 3996 aa3.52□□□□□ -1.85
PATJ-204ENST00000459752 KMT2AQ03164 3969 aa3.5□□□□□ -1.85
PATJ-204ENST00000459752 VPS13BQ7Z7G8 4022 aa3.5□□□□□ -1.85
PATJ-204ENST00000459752 PKD1P98161 4303 aa3.49□□□□□ -1.85
PATJ-204ENST00000459752 CSMD3Q7Z407 3707 aa3.48□□□□□ -1.85
PATJ-204ENST00000459752 KRTAP4-5Q9BYR2 181 aa3.48□□□□□ -1.85
PATJ-204ENST00000459752 LRP1BQ9NZR2 4599 aa3.48□□□□□ -1.85
PATJ-204ENST00000459752 KRTAP8-1Q8IUC2 63 aa3.47□□□□□ -1.85
PATJ-204ENST00000459752 APOBP04114 4563 aaKnown RBP3.45□□□□□ -1.86
PATJ-204ENST00000459752 HYDINQ4G0P3 5121 aa3.4□□□□□ -1.87
PATJ-204ENST00000459752 PKHD1P08F94 4074 aa3.39□□□□□ -1.87
PATJ-204ENST00000459752 FAT1Q14517 4588 aa3.37□□□□□ -1.87
PATJ-204ENST00000459752 RYR1P21817 5038 aa3.36□□□□□ -1.87
PATJ-204ENST00000459752 KRTAP19-4Q3LI73 84 aa3.34□□□□□ -1.87
PATJ-204ENST00000459752 BIRC6Q9NR09 4857 aa3.34□□□□□ -1.87
PATJ-204ENST00000459752 HSPG2P98160 4391 aa3.34□□□□□ -1.87
PATJ-204ENST00000459752 KRTAP17-1Q9BYP8 105 aa3.32□□□□□ -1.88
PATJ-204ENST00000459752 SPRR2GQ9BYE4 73 aa3.3□□□□□ -1.88
PATJ-204ENST00000459752 LCE3CQ5T5A8 94 aa3.29□□□□□ -1.88
PATJ-204ENST00000459752 FAT3Q8TDW7 4589 aa3.27□□□□□ -1.89
PATJ-204ENST00000459752 MUC17Q685J3 4493 aa3.26□□□□□ -1.89
PATJ-204ENST00000459752 KRTAP10-7P60409 375 aaPredicted RBP3.26□□□□□ -1.89
PATJ-204ENST00000459752 TNXBP22105 4242 aa3.25□□□□□ -1.89
PATJ-204ENST00000459752 KRTAP19-5Q3LI72 72 aa3.25□□□□□ -1.89
PATJ-204ENST00000459752 RYR3Q15413 4870 aa3.23□□□□□ -1.89
PATJ-204ENST00000459752 MT2AP02795 61 aa3.22□□□□□ -1.89
PATJ-204ENST00000459752 HERC2O95714 4834 aa3.21□□□□□ -1.9
PATJ-204ENST00000459752 MT1HP80294 61 aa3.2□□□□□ -1.9
PATJ-204ENST00000459752 KMT2CQ8NEZ4 4911 aaKnown RBP3.2□□□□□ -1.9
PATJ-204ENST00000459752 KRTAP4-1Q9BYQ7 146 aa3.19□□□□□ -1.9
PATJ-204ENST00000459752 HERC1Q15751 4861 aa3.17□□□□□ -1.9
PATJ-204ENST00000459752 SPRR2FQ96RM1 72 aa3.15□□□□□ -1.91
PATJ-204ENST00000459752 MYCBP2O75592 4640 aa3.14□□□□□ -1.91
PATJ-204ENST00000459752 MT1FP04733 61 aa3.12□□□□□ -1.91
PATJ-204ENST00000459752 KRTAP12-4P60329 112 aa3.11□□□□□ -1.91
PATJ-204ENST00000459752 EPPK1P58107 5090 aaKnown RBP3.1□□□□□ -1.91
PATJ-204ENST00000459752 KIAA1109Q2LD37 5005 aa3.08□□□□□ -1.92
PATJ-204ENST00000459752 SPRR5A0A1B0GTR4 108 aa3.05□□□□□ -1.92
PATJ-204ENST00000459752 LCE3BQ5TA77 95 aa3.03□□□□□ -1.92
PATJ-204ENST00000459752 KRTAP19-8Q3LI54 63 aa3.03□□□□□ -1.92
PATJ-204ENST00000459752 LRP1Q07954 4544 aaKnown RBP3.02□□□□□ -1.93
PATJ-204ENST00000459752 PCLOQ9Y6V0 5065 aa2.98□□□□□ -1.93
PATJ-204ENST00000459752 ABCA13Q86UQ4 5058 aa2.97□□□□□ -1.93
PATJ-204ENST00000459752 LCE3DQ9BYE3 92 aa2.97□□□□□ -1.93
PATJ-204ENST00000459752 LCE2CQ5TA81 110 aa2.97□□□□□ -1.93
PATJ-204ENST00000459752 KRTAP19-1Q8IUB9 90 aa2.97□□□□□ -1.93
PATJ-204ENST00000459752 KRTAP19-2Q3LHN2 52 aa2.96□□□□□ -1.94
PATJ-204ENST00000459752 LCE3EQ5T5B0 92 aa2.95□□□□□ -1.94
PATJ-204ENST00000459752 MT1GP13640 62 aa2.94□□□□□ -1.94
PATJ-204ENST00000459752 MT1XP80297 61 aa2.93□□□□□ -1.94
PATJ-204ENST00000459752 SPRR2EP22531 72 aa2.91□□□□□ -1.94
PATJ-204ENST00000459752 SPRR2BP35325 72 aa2.91□□□□□ -1.94
PATJ-204ENST00000459752 SPRR2AP35326 72 aa2.91□□□□□ -1.94
PATJ-204ENST00000459752 KRTAP9-8Q9BYQ0 159 aa2.86□□□□□ -1.95
PATJ-204ENST00000459752 LPAP08519 4548 aa2.85□□□□□ -1.95
PATJ-204ENST00000459752 MT1BP07438 61 aa2.85□□□□□ -1.95
PATJ-204ENST00000459752 LCE2BO14633 110 aa2.85□□□□□ -1.95
PATJ-204ENST00000459752 HMCN2Q8NDA2 5059 aa2.85□□□□□ -1.95
PATJ-204ENST00000459752 SPRR2DP22532 72 aa2.83□□□□□ -1.96
PATJ-204ENST00000459752 LCE2AQ5TA79 106 aaPredicted RBP2.83□□□□□ -1.96
PATJ-204ENST00000459752 FLGP20930 4061 aaPredicted RBP2.81□□□□□ -1.96
PATJ-204ENST00000459752 LCE2DQ5TA82 110 aaPredicted RBP2.8□□□□□ -1.96
PATJ-204ENST00000459752 KRTAP9-3Q9BYQ3 159 aa2.8□□□□□ -1.96
PATJ-204ENST00000459752 KRTAP4-8A0A0G2JLE6 195 aa2.78□□□□□ -1.96
PATJ-204ENST00000459752 MT1LQ93083 61 aa2.78□□□□□ -1.96
PATJ-204ENST00000459752 KRTAP4-8Q9BYQ9 185 aa2.78□□□□□ -1.96
PATJ-204ENST00000459752 LRP2P98164 4655 aa2.76□□□□□ -1.97
PATJ-204ENST00000459752 KRTAP19-3Q7Z4W3 81 aa2.74□□□□□ -1.97
PATJ-204ENST00000459752 PRM1P04553 51 aa2.72□□□□□ -1.97
PATJ-204ENST00000459752 KRTAP9-6A0A140TA67 174 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms