RNA–Protein interactions for RNA: ENST00000456986.5

NEDD4L-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 8,436 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-209ENST00000456986 HUWE1Q7Z6Z7 4374 aaKnown RBP3.94□□□□□ -1.78
NEDD4L-209ENST00000456986 CRCT1Q9UGL9 99 aa3.94□□□□□ -1.78
NEDD4L-209ENST00000456986 DNAH1Q9P2D7 4330 aa3.91□□□□□ -1.78
NEDD4L-209ENST00000456986 DNAH6Q9C0G6 4158 aa3.89□□□□□ -1.79
NEDD4L-209ENST00000456986 KRTAP3-3Q9BYR6 98 aa3.89□□□□□ -1.79
NEDD4L-209ENST00000456986 KRTAP3-2Q9BYR7 98 aa3.89□□□□□ -1.79
NEDD4L-209ENST00000456986 DNAH2Q9P225 4427 aa3.83□□□□□ -1.8
NEDD4L-209ENST00000456986 VPS13BQ7Z7G8 4022 aa3.83□□□□□ -1.8
NEDD4L-209ENST00000456986 KRTAP10-12P60413 245 aa3.81□□□□□ -1.8
NEDD4L-209ENST00000456986 MT1HL1P0DM35 61 aa3.8□□□□□ -1.8
NEDD4L-209ENST00000456986 KMT2AQ03164 3969 aa3.79□□□□□ -1.8
NEDD4L-209ENST00000456986 KRTAP10-4P60372 401 aaPredicted RBP3.79□□□□□ -1.8
NEDD4L-209ENST00000456986 KRTAP10-5P60370 271 aa3.76□□□□□ -1.81
NEDD4L-209ENST00000456986 KRTAP12-3P60328 96 aa3.7□□□□□ -1.82
NEDD4L-209ENST00000456986 PRKDCP78527 4128 aaKnown RBP3.68□□□□□ -1.82
NEDD4L-209ENST00000456986 DNAH9Q9NYC9 4486 aa3.68□□□□□ -1.82
NEDD4L-209ENST00000456986 KRTAP10-7P60409 375 aaPredicted RBP3.66□□□□□ -1.82
NEDD4L-209ENST00000456986 DYNC2H1Q8NCM8 4307 aaKnown RBP3.62□□□□□ -1.83
NEDD4L-209ENST00000456986 KRTAP19-4Q3LI73 84 aa3.59□□□□□ -1.84
NEDD4L-209ENST00000456986 FAT2Q9NYQ8 4349 aa3.58□□□□□ -1.84
NEDD4L-209ENST00000456986 VPS13DQ5THJ4 4388 aa3.57□□□□□ -1.84
NEDD4L-209ENST00000456986 DNAH10Q8IVF4 4471 aa3.57□□□□□ -1.84
NEDD4L-209ENST00000456986 LCE3AQ5TA76 89 aa3.54□□□□□ -1.84
NEDD4L-209ENST00000456986 DNAH11Q96DT5 4516 aa3.54□□□□□ -1.84
NEDD4L-209ENST00000456986 KRTAP8-1Q8IUC2 63 aa3.5□□□□□ -1.85
NEDD4L-209ENST00000456986 SPRR2GQ9BYE4 73 aa3.49□□□□□ -1.85
NEDD4L-209ENST00000456986 DNAH17Q9UFH2 4485 aa3.47□□□□□ -1.85
NEDD4L-209ENST00000456986 FLGP20930 4061 aaPredicted RBP3.44□□□□□ -1.86
NEDD4L-209ENST00000456986 PLECQ15149 4684 aaKnown RBP3.43□□□□□ -1.86
NEDD4L-209ENST00000456986 STARD9Q9P2P6 4700 aa3.43□□□□□ -1.86
NEDD4L-209ENST00000456986 LORP23490 312 aaPredicted RBP3.4□□□□□ -1.86
NEDD4L-209ENST00000456986 DNAH8Q96JB1 4490 aa3.4□□□□□ -1.86
NEDD4L-209ENST00000456986 KRTAP4-5Q9BYR2 181 aa3.39□□□□□ -1.87
NEDD4L-209ENST00000456986 PKHD1P08F94 4074 aa3.38□□□□□ -1.87
NEDD4L-209ENST00000456986 DNAH5Q8TE73 4624 aa3.3□□□□□ -1.88
NEDD4L-209ENST00000456986 MT1HP80294 61 aa3.3□□□□□ -1.88
NEDD4L-209ENST00000456986 MT3P25713 68 aa3.29□□□□□ -1.88
NEDD4L-209ENST00000456986 PKHD1L1Q86WI1 4243 aa3.28□□□□□ -1.88
NEDD4L-209ENST00000456986 LCE3CQ5T5A8 94 aa3.27□□□□□ -1.89
NEDD4L-209ENST00000456986 KRTAP4-1Q9BYQ7 146 aa3.25□□□□□ -1.89
NEDD4L-209ENST00000456986 LRP1BQ9NZR2 4599 aa3.25□□□□□ -1.89
NEDD4L-209ENST00000456986 MT2AP02795 61 aa3.25□□□□□ -1.89
NEDD4L-209ENST00000456986 DYNC1H1Q14204 4646 aaKnown RBP3.21□□□□□ -1.89
NEDD4L-209ENST00000456986 KRTAP19-8Q3LI54 63 aa3.2□□□□□ -1.9
NEDD4L-209ENST00000456986 KRTAP19-5Q3LI72 72 aa3.17□□□□□ -1.9
NEDD4L-209ENST00000456986 TNXBP22105 4242 aa3.17□□□□□ -1.9
NEDD4L-209ENST00000456986 SPRR5A0A1B0GTR4 108 aa3.16□□□□□ -1.9
NEDD4L-209ENST00000456986 PKD1P98161 4303 aa3.15□□□□□ -1.9
NEDD4L-209ENST00000456986 MT1FP04733 61 aa3.15□□□□□ -1.91
NEDD4L-209ENST00000456986 SPRR2FQ96RM1 72 aa3.14□□□□□ -1.91
NEDD4L-209ENST00000456986 SACSQ9NZJ4 4579 aa3.09□□□□□ -1.91
NEDD4L-209ENST00000456986 APOBP04114 4563 aaKnown RBP3.09□□□□□ -1.91
NEDD4L-209ENST00000456986 KRTAP19-1Q8IUB9 90 aa3.09□□□□□ -1.91
NEDD4L-209ENST00000456986 LRP1Q07954 4544 aaKnown RBP3.08□□□□□ -1.92
NEDD4L-209ENST00000456986 KRTAP12-4P60329 112 aa3.06□□□□□ -1.92
NEDD4L-209ENST00000456986 HSPG2P98160 4391 aa3.03□□□□□ -1.92
NEDD4L-209ENST00000456986 LCE3BQ5TA77 95 aa3.03□□□□□ -1.92
NEDD4L-209ENST00000456986 MT1XP80297 61 aa3.03□□□□□ -1.93
NEDD4L-209ENST00000456986 FAT1Q14517 4588 aa3.01□□□□□ -1.93
NEDD4L-209ENST00000456986 FAT3Q8TDW7 4589 aa2.98□□□□□ -1.93
NEDD4L-209ENST00000456986 SPRR2EP22531 72 aa2.97□□□□□ -1.93
NEDD4L-209ENST00000456986 SPRR2BP35325 72 aa2.97□□□□□ -1.93
NEDD4L-209ENST00000456986 SPRR2AP35326 72 aa2.97□□□□□ -1.93
NEDD4L-209ENST00000456986 LCE3DQ9BYE3 92 aa2.96□□□□□ -1.93
NEDD4L-209ENST00000456986 KRTAP9-8Q9BYQ0 159 aa2.94□□□□□ -1.94
NEDD4L-209ENST00000456986 MT1GP13640 62 aa2.92□□□□□ -1.94
NEDD4L-209ENST00000456986 LCE3EQ5T5B0 92 aa2.92□□□□□ -1.94
NEDD4L-209ENST00000456986 MT1BP07438 61 aa2.92□□□□□ -1.94
NEDD4L-209ENST00000456986 MYCBP2O75592 4640 aa2.9□□□□□ -1.95
NEDD4L-209ENST00000456986 LCE2BO14633 110 aa2.9□□□□□ -1.95
NEDD4L-209ENST00000456986 SPRR2DP22532 72 aa2.9□□□□□ -1.95
NEDD4L-209ENST00000456986 MT1LQ93083 61 aa2.87□□□□□ -1.95
NEDD4L-209ENST00000456986 KRTAP9-3Q9BYQ3 159 aa2.87□□□□□ -1.95
NEDD4L-209ENST00000456986 LCE2CQ5TA81 110 aa2.84□□□□□ -1.95
NEDD4L-209ENST00000456986 LPAP08519 4548 aa2.82□□□□□ -1.96
NEDD4L-209ENST00000456986 DNHD1Q96M86 4753 aa2.79□□□□□ -1.96
NEDD4L-209ENST00000456986 KRTAP19-3Q7Z4W3 81 aa2.78□□□□□ -1.96
NEDD4L-209ENST00000456986 MT1EP04732 61 aa2.77□□□□□ -1.97
NEDD4L-209ENST00000456986 KRTAP19-2Q3LHN2 52 aa2.76□□□□□ -1.97
NEDD4L-209ENST00000456986 LRP2P98164 4655 aa2.76□□□□□ -1.97
NEDD4L-209ENST00000456986 KRTAP17-1Q9BYP8 105 aa2.74□□□□□ -1.97
NEDD4L-209ENST00000456986 RYR1P21817 5038 aa2.74□□□□□ -1.97
NEDD4L-209ENST00000456986 MUC17Q685J3 4493 aa2.73□□□□□ -1.97
NEDD4L-209ENST00000456986 LCE2DQ5TA82 110 aaPredicted RBP2.71□□□□□ -1.98
NEDD4L-209ENST00000456986 PRM1P04553 51 aa2.7□□□□□ -1.98
NEDD4L-209ENST00000456986 RYR3Q15413 4870 aa2.7□□□□□ -1.98
NEDD4L-209ENST00000456986 KRTAP4-8A0A0G2JLE6 195 aa2.67□□□□□ -1.98
NEDD4L-209ENST00000456986 KRTAP4-8Q9BYQ9 185 aa2.67□□□□□ -1.98
NEDD4L-209ENST00000456986 KRTAP19-6Q3LI70 58 aa2.65□□□□□ -1.98
NEDD4L-209ENST00000456986 LCE1BQ5T7P3 118 aa2.65□□□□□ -1.99
NEDD4L-209ENST00000456986 RYR2Q92736 4967 aa2.64□□□□□ -1.99
NEDD4L-209ENST00000456986 MT1MQ8N339 61 aa2.63□□□□□ -1.99
NEDD4L-209ENST00000456986 KRTAP2-3P0C7H8 128 aa2.6□□□□□ -1.99
NEDD4L-209ENST00000456986 KRTAP2-4Q9BYR9 128 aa2.6□□□□□ -1.99
NEDD4L-209ENST00000456986 KRTAP2-1Q9BYU5 128 aa2.6□□□□□ -1.99
NEDD4L-209ENST00000456986 LCE1DQ5T752 114 aa2.59□□□□□ -1.99
NEDD4L-209ENST00000456986 HYDINQ4G0P3 5121 aa2.56□□□□□ -2
NEDD4L-209ENST00000456986 MT1AP04731 61 aa2.55□□□□□ -2
NEDD4L-209ENST00000456986 MT4P47944 62 aa2.52□□□□□ -2.01
NEDD4L-209ENST00000456986 KMT2CQ8NEZ4 4911 aaKnown RBP2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms