RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 KRTAP24-1Q3LI83 254 aa2.46□□□□□ -2.02
DEPDC1-202ENST00000456315 SPACA4Q8TDM5 124 aa2.46□□□□□ -2.02
DEPDC1-202ENST00000456315 ACYP2P14621 99 aa2.45□□□□□ -2.02
DEPDC1-202ENST00000456315 ZNF706Q9Y5V0 76 aaPredicted RBP2.45□□□□□ -2.02
DEPDC1-202ENST00000456315 CIRBP-AS1Q8TBR5 109 aa2.44□□□□□ -2.02
DEPDC1-202ENST00000456315 KRTAP10-6P60371 365 aaPredicted RBP2.43□□□□□ -2.02
DEPDC1-202ENST00000456315 NDUFAF8A1L188 74 aa2.42□□□□□ -2.02
DEPDC1-202ENST00000456315 KRTAP1-4P0C5Y4 121 aa2.42□□□□□ -2.02
DEPDC1-202ENST00000456315 A0A087WTM6 91 aa2.42□□□□□ -2.02
DEPDC1-202ENST00000456315 APLNQ9ULZ1 77 aa2.41□□□□□ -2.02
DEPDC1-202ENST00000456315 LCE2DQ5TA82 110 aaPredicted RBP2.41□□□□□ -2.02
DEPDC1-202ENST00000456315 KRTAP3-3Q9BYR6 98 aa2.41□□□□□ -2.02
DEPDC1-202ENST00000456315 KRTAP3-2Q9BYR7 98 aa2.4□□□□□ -2.02
DEPDC1-202ENST00000456315 KRTAP10-2P60368 255 aa2.4□□□□□ -2.03
DEPDC1-202ENST00000456315 COX6B2Q6YFQ2 88 aa2.39□□□□□ -2.03
DEPDC1-202ENST00000456315 KRTAP15-1Q3LI76 137 aa2.38□□□□□ -2.03
DEPDC1-202ENST00000456315 LY6G6CO95867 125 aa2.38□□□□□ -2.03
DEPDC1-202ENST00000456315 KRTAP10-8P60410 259 aa2.38□□□□□ -2.03
DEPDC1-202ENST00000456315 FAM229AH3BQW9 127 aa2.38□□□□□ -2.03
DEPDC1-202ENST00000456315 KMT2DO14686 5537 aa2.37□□□□□ -2.03
DEPDC1-202ENST00000456315 NBDYA0A0U1RRE5 68 aa2.37□□□□□ -2.03
DEPDC1-202ENST00000456315 C20orf166-AS1Q96NR2 134 aa2.36□□□□□ -2.03
DEPDC1-202ENST00000456315 A0A1B0GU33 70 aa2.36□□□□□ -2.03
DEPDC1-202ENST00000456315 SSBP3-AS1Q7Z2R9 100 aa2.34□□□□□ -2.03
DEPDC1-202ENST00000456315 FLGP20930 4061 aaPredicted RBP2.34□□□□□ -2.04
DEPDC1-202ENST00000456315 J3QKU1 62 aa2.33□□□□□ -2.04
DEPDC1-202ENST00000456315 KRTAP12-2P59991 146 aa2.32□□□□□ -2.04
DEPDC1-202ENST00000456315 A0A0D9SG42 100 aa2.32□□□□□ -2.04
DEPDC1-202ENST00000456315 KRTAP10-1P60331 282 aa2.32□□□□□ -2.04
DEPDC1-202ENST00000456315 H1FX-AS1Q4G0G2 97 aa2.32□□□□□ -2.04
DEPDC1-202ENST00000456315 MUC17Q685J3 4493 aa2.31□□□□□ -2.04
DEPDC1-202ENST00000456315 CDK2AP2O75956 126 aa2.31□□□□□ -2.04
DEPDC1-202ENST00000456315 C9orf92A6NGG3 77 aa2.29□□□□□ -2.04
DEPDC1-202ENST00000456315 SYNE1Q8NF91 8797 aaKnown RBP2.27□□□□□ -2.05
DEPDC1-202ENST00000456315 KRTAP12-1P59990 96 aa2.27□□□□□ -2.05
DEPDC1-202ENST00000456315 UBE2DNLQ8IWF7 75 aa2.26□□□□□ -2.05
DEPDC1-202ENST00000456315 XP32Q5T750 250 aa2.26□□□□□ -2.05
DEPDC1-202ENST00000456315 DSTQ03001 7570 aaKnown RBP2.25□□□□□ -2.05
DEPDC1-202ENST00000456315 KRTAP10-4P60372 401 aaPredicted RBP2.25□□□□□ -2.05
DEPDC1-202ENST00000456315 LORP23490 312 aaPredicted RBP2.25□□□□□ -2.05
DEPDC1-202ENST00000456315 SMR3BP02814 79 aaPredicted RBP2.24□□□□□ -2.05
DEPDC1-202ENST00000456315 RPL37P61927 97 aaKnown RBP2.24□□□□□ -2.05
DEPDC1-202ENST00000456315 A0A0A0MQY5 61 aa2.23□□□□□ -2.05
DEPDC1-202ENST00000456315 SPINT4Q6UDR6 99 aa2.23□□□□□ -2.05
DEPDC1-202ENST00000456315 S4R3F8 94 aa2.22□□□□□ -2.05
DEPDC1-202ENST00000456315 NUPR2A6NF83 97 aa2.2□□□□□ -2.06
DEPDC1-202ENST00000456315 SSPOA2VEC9 5147 aa2.17□□□□□ -2.06
DEPDC1-202ENST00000456315 LOC100996750A0A140TA64 210 aa2.17□□□□□ -2.06
DEPDC1-202ENST00000456315 KRTAP4-6Q9BYQ5 205 aa2.17□□□□□ -2.06
DEPDC1-202ENST00000456315 FCGBPQ9Y6R7 5405 aaPredicted RBP2.14□□□□□ -2.07
DEPDC1-202ENST00000456315 FSIP2Q5CZC0 6907 aa2.12□□□□□ -2.07
DEPDC1-202ENST00000456315 PLAC4Q8WY50 150 aa2.08□□□□□ -2.08
DEPDC1-202ENST00000456315 KRTAP4-1Q9BYQ7 146 aa2.08□□□□□ -2.08
DEPDC1-202ENST00000456315 KRTAP19-2Q3LHN2 52 aa2.07□□□□□ -2.08
DEPDC1-202ENST00000456315 LUZP6Q538Z0 58 aa2.06□□□□□ -2.08
DEPDC1-202ENST00000456315 K7ERS5 55 aa2.06□□□□□ -2.08
DEPDC1-202ENST00000456315 MT1HL1P0DM35 61 aa2.04□□□□□ -2.08
DEPDC1-202ENST00000456315 RPS29P62273 56 aaKnown RBP2.03□□□□□ -2.08
DEPDC1-202ENST00000456315 MUC12Q9UKN1 5478 aa2.02□□□□□ -2.09
DEPDC1-202ENST00000456315 SPRR5A0A1B0GTR4 108 aa2.01□□□□□ -2.09
DEPDC1-202ENST00000456315 M0QZ58 72 aa2□□□□□ -2.09
DEPDC1-202ENST00000456315 A0A1B0GVY2 172 aa1.99□□□□□ -2.09
DEPDC1-202ENST00000456315 KRTAP4-5Q9BYR2 181 aa1.99□□□□□ -2.09
DEPDC1-202ENST00000456315 LCE2AQ5TA79 106 aaPredicted RBP1.98□□□□□ -2.09
DEPDC1-202ENST00000456315 SEC61BP60468 96 aaKnown RBP1.97□□□□□ -2.09
DEPDC1-202ENST00000456315 KRTAP9-6A0A140TA67 174 aa1.96□□□□□ -2.1
DEPDC1-202ENST00000456315 R4GN34 69 aa1.96□□□□□ -2.1
DEPDC1-202ENST00000456315 KRTAP19-1Q8IUB9 90 aa1.91□□□□□ -2.1
DEPDC1-202ENST00000456315 KRTAP9-2Q9BYQ4 174 aa1.89□□□□□ -2.11
DEPDC1-202ENST00000456315 MDN1Q9NU22 5596 aa1.89□□□□□ -2.11
DEPDC1-202ENST00000456315 KRTAP9-6A8MVA2 160 aa1.86□□□□□ -2.11
DEPDC1-202ENST00000456315 Q5VSD8 79 aa1.86□□□□□ -2.11
DEPDC1-202ENST00000456315 KRTAP10-12P60413 245 aa1.84□□□□□ -2.11
DEPDC1-202ENST00000456315 LCE3AQ5TA76 89 aa1.84□□□□□ -2.12
DEPDC1-202ENST00000456315 LCE2CQ5TA81 110 aa1.84□□□□□ -2.12
DEPDC1-202ENST00000456315 CAMK2N1Q7Z7J9 78 aa1.83□□□□□ -2.12
DEPDC1-202ENST00000456315 MUC19Q7Z5P9 8384 aa1.82□□□□□ -2.12
DEPDC1-202ENST00000456315 J3QL48 77 aa1.81□□□□□ -2.12
DEPDC1-202ENST00000456315 PRO2289Q9P1D8 64 aa1.81□□□□□ -2.12
DEPDC1-202ENST00000456315 KRTAP4-8Q9BYQ9 185 aa1.8□□□□□ -2.12
DEPDC1-202ENST00000456315 KRTAP8-1Q8IUC2 63 aa1.79□□□□□ -2.12
DEPDC1-202ENST00000456315 PP632Q6XCG6 107 aa1.79□□□□□ -2.12
DEPDC1-202ENST00000456315 LCE2BO14633 110 aa1.78□□□□□ -2.12
DEPDC1-202ENST00000456315 KRTAP4-7Q9BYR0 210 aa1.77□□□□□ -2.13
DEPDC1-202ENST00000456315 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.77□□□□□ -2.13
DEPDC1-202ENST00000456315 TNP1P09430 55 aa1.76□□□□□ -2.13
DEPDC1-202ENST00000456315 KRTAP10-10P60014 251 aa1.76□□□□□ -2.13
DEPDC1-202ENST00000456315 KRTAP10-7P60409 375 aaPredicted RBP1.75□□□□□ -2.13
DEPDC1-202ENST00000456315 MT1FP04733 61 aa1.75□□□□□ -2.13
DEPDC1-202ENST00000456315 KRTAP10-5P60370 271 aa1.75□□□□□ -2.13
DEPDC1-202ENST00000456315 KRTAP4-12Q9BQ66 201 aa1.75□□□□□ -2.13
DEPDC1-202ENST00000456315 MT1XP80297 61 aa1.74□□□□□ -2.13
DEPDC1-202ENST00000456315 SPRR2GQ9BYE4 73 aa1.74□□□□□ -2.13
DEPDC1-202ENST00000456315 MT1BP07438 61 aa1.73□□□□□ -2.13
DEPDC1-202ENST00000456315 KRTAP4-8A0A0G2JLE6 195 aa1.72□□□□□ -2.13
DEPDC1-202ENST00000456315 KRTAP9-8Q9BYQ0 159 aa1.72□□□□□ -2.13
DEPDC1-202ENST00000456315 MT2AP02795 61 aa1.69□□□□□ -2.14
DEPDC1-202ENST00000456315 KRTAP23-1A1A580 65 aa1.69□□□□□ -2.14
DEPDC1-202ENST00000456315 CRCT1Q9UGL9 99 aa1.69□□□□□ -2.14
DEPDC1-202ENST00000456315 KRTAP12-3P60328 96 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms