RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 FABP4P15090 132 aa3.11□□□□□ -1.91
LINC01961-201ENST00000449954 SVBPQ8N300 66 aa3.11□□□□□ -1.91
LINC01961-201ENST00000449954 PLAC4Q8WY50 150 aa3.11□□□□□ -1.91
LINC01961-201ENST00000449954 AHNAKQ09666 5890 aaKnown RBP3.11□□□□□ -1.91
LINC01961-201ENST00000449954 K7EQZ3 153 aa3.1□□□□□ -1.91
LINC01961-201ENST00000449954 PSPHP1O15172 72 aa3.1□□□□□ -1.91
LINC01961-201ENST00000449954 NDUFB1O75438 58 aa3.1□□□□□ -1.91
LINC01961-201ENST00000449954 APOC3P02656 99 aa3.1□□□□□ -1.91
LINC01961-201ENST00000449954 HIST3H2BBQ8N257 126 aa3.08□□□□□ -1.92
LINC01961-201ENST00000449954 HIST1H4GQ99525 98 aa3.08□□□□□ -1.92
LINC01961-201ENST00000449954 C8orf17Q9NRJ1 99 aa3.08□□□□□ -1.92
LINC01961-201ENST00000449954 A8MU10 97 aa3.07□□□□□ -1.92
LINC01961-201ENST00000449954 CCKP06307 115 aa3.07□□□□□ -1.92
LINC01961-201ENST00000449954 FABP2P12104 132 aa3.07□□□□□ -1.92
LINC01961-201ENST00000449954 PSMB2P49721 201 aa3.07□□□□□ -1.92
LINC01961-201ENST00000449954 MP68P56378 58 aa3.07□□□□□ -1.92
LINC01961-201ENST00000449954 KTN1-AS1Q86SY8 53 aa3.07□□□□□ -1.92
LINC01961-201ENST00000449954 A8MUN3 132 aa3.06□□□□□ -1.92
LINC01961-201ENST00000449954 ATOH7Q8N100 152 aa3.06□□□□□ -1.92
LINC01961-201ENST00000449954 SMIM26A0A096LP01 95 aa3.05□□□□□ -1.92
LINC01961-201ENST00000449954 PDE6GP18545 87 aa3.05□□□□□ -1.92
LINC01961-201ENST00000449954 LCE3AQ5TA76 89 aa3.05□□□□□ -1.92
LINC01961-201ENST00000449954 SYS1-DBNDD2H3BUS1 97 aa3.04□□□□□ -1.92
LINC01961-201ENST00000449954 TMEM258P61165 79 aa3.04□□□□□ -1.92
LINC01961-201ENST00000449954 OBSCNQ5VST9 7968 aa3.03□□□□□ -1.92
LINC01961-201ENST00000449954 LINC01545Q5VT33 79 aa3.03□□□□□ -1.92
LINC01961-201ENST00000449954 KRTAP19-3Q7Z4W3 81 aa3.03□□□□□ -1.92
LINC01961-201ENST00000449954 VAMP8Q9BV40 100 aa3.03□□□□□ -1.92
LINC01961-201ENST00000449954 CYSTM1Q9H1C7 97 aa3.03□□□□□ -1.92
LINC01961-201ENST00000449954 H0YGX0 51 aa3.02□□□□□ -1.93
LINC01961-201ENST00000449954 TAX1BP3O14907 124 aa3.02□□□□□ -1.93
LINC01961-201ENST00000449954 MT-ATP8P03928 68 aa3.02□□□□□ -1.93
LINC01961-201ENST00000449954 YPEL4Q96NS1 127 aa3.02□□□□□ -1.93
LINC01961-201ENST00000449954 HIST1H2BLQ99880 126 aa3.02□□□□□ -1.93
LINC01961-201ENST00000449954 MUC5ACP98088 5654 aa3.02□□□□□ -1.93
LINC01961-201ENST00000449954 COA6Q5JTJ3 125 aaKnown RBP3.01□□□□□ -1.93
LINC01961-201ENST00000449954 MRPL34Q9BQ48 92 aaKnown RBP3.01□□□□□ -1.93
LINC01961-201ENST00000449954 KRTAP4-3Q9BYR4 195 aa3.01□□□□□ -1.93
LINC01961-201ENST00000449954 UQCRQO14949 82 aa3□□□□□ -1.93
LINC01961-201ENST00000449954 TMEM254Q8TBM7 123 aa3□□□□□ -1.93
LINC01961-201ENST00000449954 BRK1Q8WUW1 75 aa3□□□□□ -1.93
LINC01961-201ENST00000449954 K7EP34 96 aa2.99□□□□□ -1.93
LINC01961-201ENST00000449954 H0YAA0 97 aa2.98□□□□□ -1.93
LINC01961-201ENST00000449954 H3BQ85 93 aa2.98□□□□□ -1.93
LINC01961-201ENST00000449954 UQCR10Q9UDW1 63 aa2.98□□□□□ -1.93
LINC01961-201ENST00000449954 C1orf64Q8NEQ6 169 aa2.97□□□□□ -1.93
LINC01961-201ENST00000449954 MUC5BQ9HC84 5762 aaPredicted RBP2.96□□□□□ -1.94
LINC01961-201ENST00000449954 TMEM256-PLSCR3K7ERE1 68 aa2.96□□□□□ -1.94
LINC01961-201ENST00000449954 HIST1H2BKO60814 126 aa2.96□□□□□ -1.94
LINC01961-201ENST00000449954 HIST1H2BJP06899 126 aa2.96□□□□□ -1.94
LINC01961-201ENST00000449954 HIST1H2BOP23527 126 aa2.96□□□□□ -1.94
LINC01961-201ENST00000449954 HIST1H2BBP33778 126 aa2.96□□□□□ -1.94
LINC01961-201ENST00000449954 HIST1H2BDP58876 126 aa2.96□□□□□ -1.94
LINC01961-201ENST00000449954 HIST1H2BCP62807 126 aa2.96□□□□□ -1.94
LINC01961-201ENST00000449954 HIST2H2BEQ16778 126 aa2.96□□□□□ -1.94
LINC01961-201ENST00000449954 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.96□□□□□ -1.94
LINC01961-201ENST00000449954 HIST1H2BHQ93079 126 aa2.96□□□□□ -1.94
LINC01961-201ENST00000449954 HIST1H2BNQ99877 126 aa2.96□□□□□ -1.94
LINC01961-201ENST00000449954 HIST1H2BMQ99879 126 aa2.96□□□□□ -1.94
LINC01961-201ENST00000449954 SERP1Q9Y6X1 66 aa2.96□□□□□ -1.94
LINC01961-201ENST00000449954 MMP24-AS1A0A0U1RRL7 71 aa2.95□□□□□ -1.94
LINC01961-201ENST00000449954 H3BT86 120 aa2.95□□□□□ -1.94
LINC01961-201ENST00000449954 Q5W150 140 aa2.95□□□□□ -1.94
LINC01961-201ENST00000449954 hDV103S1A0JD37 113 aa2.94□□□□□ -1.94
LINC01961-201ENST00000449954 SCGB1C2P0DMR2 95 aa2.94□□□□□ -1.94
LINC01961-201ENST00000449954 Q6ZQT0 140 aa2.94□□□□□ -1.94
LINC01961-201ENST00000449954 F8W1H4 67 aa2.93□□□□□ -1.94
LINC01961-201ENST00000449954 MT1EP04732 61 aa2.93□□□□□ -1.94
LINC01961-201ENST00000449954 LINC01554Q52M75 96 aa2.93□□□□□ -1.94
LINC01961-201ENST00000449954 OCR1Q9BZK8 76 aa2.93□□□□□ -1.94
LINC01961-201ENST00000449954 ORMDL1Q9P0S3 153 aa2.93□□□□□ -1.94
LINC01961-201ENST00000449954 DNAL4O96015 105 aa2.92□□□□□ -1.94
LINC01961-201ENST00000449954 PP632Q6XCG6 107 aa2.92□□□□□ -1.94
LINC01961-201ENST00000449954 PRO0461Q9UI25 63 aa2.92□□□□□ -1.94
LINC01961-201ENST00000449954 CXCL6P80162 114 aa2.91□□□□□ -1.94
LINC01961-201ENST00000449954 KRTAP20-2Q3LI61 65 aa2.91□□□□□ -1.94
LINC01961-201ENST00000449954 KRTAP19-7Q3SYF9 63 aa2.91□□□□□ -1.94
LINC01961-201ENST00000449954 K7ERJ3 54 aa2.9□□□□□ -1.95
LINC01961-201ENST00000449954 MT1GP13640 62 aa2.9□□□□□ -1.95
LINC01961-201ENST00000449954 COX7CP15954 63 aa2.9□□□□□ -1.95
LINC01961-201ENST00000449954 A0A1B0GW54 56 aa2.89□□□□□ -1.95
LINC01961-201ENST00000449954 R4GN34 69 aa2.88□□□□□ -1.95
LINC01961-201ENST00000449954 ADM2Q7Z4H4 148 aa2.87□□□□□ -1.95
LINC01961-201ENST00000449954 A0A1W2PPM0 123 aa2.86□□□□□ -1.95
LINC01961-201ENST00000449954 KRTDAPP60985 99 aa2.86□□□□□ -1.95
LINC01961-201ENST00000449954 HIST1H4AP62805 103 aaKnown RBP2.86□□□□□ -1.95
LINC01961-201ENST00000449954 A0A0B4J2C4 111 aa2.85□□□□□ -1.95
LINC01961-201ENST00000449954 SPCS1Q9Y6A9 102 aa2.85□□□□□ -1.95
LINC01961-201ENST00000449954 HCG22E2RYF7 251 aa2.84□□□□□ -1.95
LINC01961-201ENST00000449954 SPATA45Q537H7 98 aa2.84□□□□□ -1.95
LINC01961-201ENST00000449954 ETDBQ3ZM63 59 aa2.83□□□□□ -1.96
LINC01961-201ENST00000449954 MT1MQ8N339 61 aa2.83□□□□□ -1.96
LINC01961-201ENST00000449954 NDUFC1O43677 76 aa2.82□□□□□ -1.96
LINC01961-201ENST00000449954 M0QZ58 72 aa2.81□□□□□ -1.96
LINC01961-201ENST00000449954 A0A087WVE0 104 aa2.8□□□□□ -1.96
LINC01961-201ENST00000449954 ATP5EP56381 51 aaPredicted RBP2.8□□□□□ -1.96
LINC01961-201ENST00000449954 ATOX1O00244 68 aa2.79□□□□□ -1.96
LINC01961-201ENST00000449954 C20orf197Q8N268 126 aa2.79□□□□□ -1.96
LINC01961-201ENST00000449954 NREPQ16612 68 aa2.78□□□□□ -1.96
LINC01961-201ENST00000449954 CEND1Q8N111 149 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms