RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 CDC42SE2Q9NRR3 84 aa2.51□□□□□ -2.01
SDCBP-205ENST00000447267 RNASE13Q5GAN3 156 aaKnown RBP2.5□□□□□ -2.01
SDCBP-205ENST00000447267 C9orf129Q5T035 196 aaKnown RBP2.5□□□□□ -2.01
SDCBP-205ENST00000447267 Q8NBF4 154 aa2.5□□□□□ -2.01
SDCBP-205ENST00000447267 FAM218AQ96MZ4 157 aa2.5□□□□□ -2.01
SDCBP-205ENST00000447267 LENEPQ9Y5L5 61 aa2.5□□□□□ -2.01
SDCBP-205ENST00000447267 HMCN1Q96RW7 5635 aa2.5□□□□□ -2.01
SDCBP-205ENST00000447267 LOC101927531A0A1B0GV80 90 aa2.49□□□□□ -2.01
SDCBP-205ENST00000447267 NCR3O14931 201 aa2.49□□□□□ -2.01
SDCBP-205ENST00000447267 ZNF625Q96I27 306 aaPredicted RBP2.49□□□□□ -2.01
SDCBP-205ENST00000447267 JMJD7-PLA2G4BH0Y9G9 81 aa2.48□□□□□ -2.01
SDCBP-205ENST00000447267 BPY2O14599 106 aa2.48□□□□□ -2.01
SDCBP-205ENST00000447267 PPP1R17O96001 155 aa2.48□□□□□ -2.01
SDCBP-205ENST00000447267 FAM74A4Q5TZK3 123 aa2.48□□□□□ -2.01
SDCBP-205ENST00000447267 MIR7-3HGQ8N6C7 128 aa2.48□□□□□ -2.01
SDCBP-205ENST00000447267 HIGD2AQ9BW72 106 aa2.48□□□□□ -2.01
SDCBP-205ENST00000447267 TRBV6-5A0A0K0K1A5 114 aa2.47□□□□□ -2.01
SDCBP-205ENST00000447267 C9orf92A6NGG3 77 aa2.47□□□□□ -2.01
SDCBP-205ENST00000447267 ADM2Q7Z4H4 148 aa2.47□□□□□ -2.01
SDCBP-205ENST00000447267 OCR1Q9BZK8 76 aa2.47□□□□□ -2.01
SDCBP-205ENST00000447267 ORMDL1Q9P0S3 153 aa2.47□□□□□ -2.01
SDCBP-205ENST00000447267 DSTQ03001 7570 aaKnown RBP2.47□□□□□ -2.01
SDCBP-205ENST00000447267 IGKV3OR2-268A0A0C4DH90 116 aa2.46□□□□□ -2.02
SDCBP-205ENST00000447267 H0YGX0 51 aa2.46□□□□□ -2.02
SDCBP-205ENST00000447267 ELOF1P60002 83 aaKnown RBP2.46□□□□□ -2.02
SDCBP-205ENST00000447267 LINC00308Q8TCZ7 52 aa2.46□□□□□ -2.02
SDCBP-205ENST00000447267 A0A1B0GW54 56 aa2.45□□□□□ -2.02
SDCBP-205ENST00000447267 IGKV2-29A2NJV5 120 aaPredicted RBP2.45□□□□□ -2.02
SDCBP-205ENST00000447267 ZCCHC13Q8WW36 166 aaKnown RBP2.45□□□□□ -2.02
SDCBP-205ENST00000447267 Q9BRP9 147 aa2.45□□□□□ -2.02
SDCBP-205ENST00000447267 LOC110117498A0A087WWA1 95 aa2.44□□□□□ -2.02
SDCBP-205ENST00000447267 ROMO1P60602 79 aa2.44□□□□□ -2.02
SDCBP-205ENST00000447267 SPAG11AQ6PDA7 123 aa2.44□□□□□ -2.02
SDCBP-205ENST00000447267 LINC00167Q96N53 147 aa2.44□□□□□ -2.02
SDCBP-205ENST00000447267 NDUFA1O15239 70 aa2.43□□□□□ -2.02
SDCBP-205ENST00000447267 KRTAP13-1Q8IUC0 172 aa2.43□□□□□ -2.02
SDCBP-205ENST00000447267 RPL39LQ96EH5 51 aaKnown RBP2.43□□□□□ -2.02
SDCBP-205ENST00000447267 LINC00208Q96KT6 92 aa2.43□□□□□ -2.02
SDCBP-205ENST00000447267 A0A1W2PNM2 257 aa2.42□□□□□ -2.02
SDCBP-205ENST00000447267 NDUFB1O75438 58 aa2.42□□□□□ -2.02
SDCBP-205ENST00000447267 CSAG1Q6PB30 78 aa2.42□□□□□ -2.02
SDCBP-205ENST00000447267 Q6ZQT0 140 aa2.42□□□□□ -2.02
SDCBP-205ENST00000447267 XAGE1AQ9HD64 81 aa2.42□□□□□ -2.02
SDCBP-205ENST00000447267 PDE6GP18545 87 aa2.41□□□□□ -2.02
SDCBP-205ENST00000447267 RPL39P62891 51 aaKnown RBP2.41□□□□□ -2.02
SDCBP-205ENST00000447267 CAMK2N2Q96S95 79 aa2.41□□□□□ -2.02
SDCBP-205ENST00000447267 LINC01558Q9Y6Z2 57 aa2.41□□□□□ -2.02
SDCBP-205ENST00000447267 IGKV4-1P06312 121 aa2.4□□□□□ -2.03
SDCBP-205ENST00000447267 MGPP08493 103 aa2.4□□□□□ -2.03
SDCBP-205ENST00000447267 TLX1NBP0CAT3 122 aa2.4□□□□□ -2.03
SDCBP-205ENST00000447267 POLR2KP53803 58 aaKnown RBP2.4□□□□□ -2.03
SDCBP-205ENST00000447267 SPINK7P58062 85 aa2.4□□□□□ -2.03
SDCBP-205ENST00000447267 LCE1CQ5T751 118 aa2.4□□□□□ -2.03
SDCBP-205ENST00000447267 LCE1BQ5T7P3 118 aa2.4□□□□□ -2.03
SDCBP-205ENST00000447267 SPANXA2-OT1Q8N9U9 137 aa2.4□□□□□ -2.03
SDCBP-205ENST00000447267 SMIM11BQ8TCY0 68 aa2.4□□□□□ -2.03
SDCBP-205ENST00000447267 FAM104AQ969W3 186 aa2.4□□□□□ -2.03
SDCBP-205ENST00000447267 IGLV4-3A0A075B6K6 122 aa2.39□□□□□ -2.03
SDCBP-205ENST00000447267 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.39□□□□□ -2.03
SDCBP-205ENST00000447267 MIR22HGQ0VDD5 57 aa2.39□□□□□ -2.03
SDCBP-205ENST00000447267 Q8NDZ9 215 aa2.39□□□□□ -2.03
SDCBP-205ENST00000447267 COX7B2Q8TF08 81 aa2.39□□□□□ -2.03
SDCBP-205ENST00000447267 C20orf166-AS1Q96NR2 134 aa2.39□□□□□ -2.03
SDCBP-205ENST00000447267 LINC00959A0A1B0GUT2 108 aa2.38□□□□□ -2.03
SDCBP-205ENST00000447267 SPAG11BQ08648 103 aa2.38□□□□□ -2.03
SDCBP-205ENST00000447267 SPINK1P00995 79 aa2.37□□□□□ -2.03
SDCBP-205ENST00000447267 P0C880 135 aa2.37□□□□□ -2.03
SDCBP-205ENST00000447267 MT4P47944 62 aa2.37□□□□□ -2.03
SDCBP-205ENST00000447267 C6orf48Q9UBA6 75 aa2.37□□□□□ -2.03
SDCBP-205ENST00000447267 AHNAKQ09666 5890 aaKnown RBP2.36□□□□□ -2.03
SDCBP-205ENST00000447267 IGKV2-28A0A075B6P5 120 aa2.36□□□□□ -2.03
SDCBP-205ENST00000447267 ETDCA0A1B0GVM5 59 aa2.36□□□□□ -2.03
SDCBP-205ENST00000447267 A8MWP4 228 aa2.36□□□□□ -2.03
SDCBP-205ENST00000447267 IGKV2D-28P01615 120 aa2.36□□□□□ -2.03
SDCBP-205ENST00000447267 LUZP6Q538Z0 58 aa2.36□□□□□ -2.03
SDCBP-205ENST00000447267 COA5Q86WW8 74 aa2.36□□□□□ -2.03
SDCBP-205ENST00000447267 H0Y9P7 68 aa2.35□□□□□ -2.03
SDCBP-205ENST00000447267 H3BQ85 93 aa2.35□□□□□ -2.03
SDCBP-205ENST00000447267 M0QY20 66 aa2.35□□□□□ -2.03
SDCBP-205ENST00000447267 RPL37P61927 97 aaKnown RBP2.35□□□□□ -2.03
SDCBP-205ENST00000447267 RPS29P62273 56 aaKnown RBP2.35□□□□□ -2.03
SDCBP-205ENST00000447267 Q8N9L7 120 aa2.35□□□□□ -2.03
SDCBP-205ENST00000447267 C8orf17Q9NRJ1 99 aa2.35□□□□□ -2.03
SDCBP-205ENST00000447267 UNQ6190/PRO20217Q6UXQ8 127 aa2.34□□□□□ -2.03
SDCBP-205ENST00000447267 ST20-AS1Q8NBB2 130 aa2.34□□□□□ -2.03
SDCBP-205ENST00000447267 K7ERS5 55 aa2.33□□□□□ -2.04
SDCBP-205ENST00000447267 IGLV6-57P01721 117 aa2.33□□□□□ -2.04
SDCBP-205ENST00000447267 KRTAP25-1Q3LHN0 102 aa2.33□□□□□ -2.04
SDCBP-205ENST00000447267 LINC00483Q53H64 154 aa2.33□□□□□ -2.04
SDCBP-205ENST00000447267 KCNQ1DNQ9H478 68 aa2.33□□□□□ -2.04
SDCBP-205ENST00000447267 CDKN2A-AS1Q9UH64 79 aa2.33□□□□□ -2.04
SDCBP-205ENST00000447267 RPL37AP8A6NKH3 93 aa2.32□□□□□ -2.04
SDCBP-205ENST00000447267 H3BPC8 53 aa2.32□□□□□ -2.04
SDCBP-205ENST00000447267 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.32□□□□□ -2.04
SDCBP-205ENST00000447267 A0A087WSZ3 146 aa2.31□□□□□ -2.04
SDCBP-205ENST00000447267 COX7BP24311 80 aa2.31□□□□□ -2.04
SDCBP-205ENST00000447267 LINC00158P58513 81 aa2.31□□□□□ -2.04
SDCBP-205ENST00000447267 PRLHP81277 87 aa2.31□□□□□ -2.04
SDCBP-205ENST00000447267 SPATA8Q6RVD6 105 aa2.31□□□□□ -2.04
SDCBP-205ENST00000447267 LINC00575Q6W349 94 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms