RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 TPRXLQ17RH7 258 aa2.15□□□□□ -2.07
HMGB1P16-201ENST00000447155 R4GN34 69 aa2.15□□□□□ -2.07
HMGB1P16-201ENST00000447155 TEP1Q99973 2627 aaKnown RBP2.14□□□□□ -2.07
HMGB1P16-201ENST00000447155 FASNP49327 2511 aaKnown RBP2.14□□□□□ -2.07
HMGB1P16-201ENST00000447155 TENM3Q9P273 2699 aa2.14□□□□□ -2.07
HMGB1P16-201ENST00000447155 MAST4O15021 2626 aa2.13□□□□□ -2.07
HMGB1P16-201ENST00000447155 A0A0D9SG42 100 aa2.13□□□□□ -2.07
HMGB1P16-201ENST00000447155 S4R3F8 94 aa2.13□□□□□ -2.07
HMGB1P16-201ENST00000447155 NSD1Q96L73 2696 aaPredicted RBP2.12□□□□□ -2.07
HMGB1P16-201ENST00000447155 NBEAL1Q6ZS30 2694 aa2.12□□□□□ -2.07
HMGB1P16-201ENST00000447155 SRRM2Q9UQ35 2752 aaKnown RBP2.11□□□□□ -2.07
HMGB1P16-201ENST00000447155 SMR3AQ99954 134 aa2.11□□□□□ -2.07
HMGB1P16-201ENST00000447155 C10orf95Q9H7T3 257 aa2.11□□□□□ -2.07
HMGB1P16-201ENST00000447155 ACANP16112 2415 aa2.11□□□□□ -2.07
HMGB1P16-201ENST00000447155 USP24Q9UPU5 2620 aa2.11□□□□□ -2.07
HMGB1P16-201ENST00000447155 MEGF8Q7Z7M0 2845 aa2.11□□□□□ -2.07
HMGB1P16-201ENST00000447155 ATRQ13535 2644 aa2.1□□□□□ -2.07
HMGB1P16-201ENST00000447155 KRTAP10-1P60331 282 aa2.1□□□□□ -2.07
HMGB1P16-201ENST00000447155 TGP01266 2768 aa2.1□□□□□ -2.07
HMGB1P16-201ENST00000447155 PKD1L1Q8TDX9 2849 aa2.1□□□□□ -2.07
HMGB1P16-201ENST00000447155 J3QKU1 62 aa2.09□□□□□ -2.07
HMGB1P16-201ENST00000447155 KRTAP5-8O75690 187 aa2.09□□□□□ -2.07
HMGB1P16-201ENST00000447155 PLAC4Q8WY50 150 aa2.09□□□□□ -2.07
HMGB1P16-201ENST00000447155 CUBNO60494 3623 aa2.08□□□□□ -2.08
HMGB1P16-201ENST00000447155 M0QZ58 72 aa2.08□□□□□ -2.08
HMGB1P16-201ENST00000447155 LCE1CQ5T751 118 aa2.08□□□□□ -2.08
HMGB1P16-201ENST00000447155 LCE1BQ5T7P3 118 aa2.08□□□□□ -2.08
HMGB1P16-201ENST00000447155 PDZD2O15018 2839 aa2.08□□□□□ -2.08
HMGB1P16-201ENST00000447155 FBN1P35555 2871 aaKnown RBP2.08□□□□□ -2.08
HMGB1P16-201ENST00000447155 TRRAPQ9Y4A5 3859 aa2.07□□□□□ -2.08
HMGB1P16-201ENST00000447155 ANK2Q01484 3957 aa2.07□□□□□ -2.08
HMGB1P16-201ENST00000447155 ITPR2Q14571 2701 aa2.07□□□□□ -2.08
HMGB1P16-201ENST00000447155 DNAH3Q8TD57 4116 aa2.07□□□□□ -2.08
HMGB1P16-201ENST00000447155 FLG2Q5D862 2391 aaPredicted RBP2.07□□□□□ -2.08
HMGB1P16-201ENST00000447155 FLNBO75369 2602 aaKnown RBP2.06□□□□□ -2.08
HMGB1P16-201ENST00000447155 TENM1Q9UKZ4 2725 aa2.06□□□□□ -2.08
HMGB1P16-201ENST00000447155 C9orf92A6NGG3 77 aa2.05□□□□□ -2.08
HMGB1P16-201ENST00000447155 COL6A5A8TX70 2615 aa2.05□□□□□ -2.08
HMGB1P16-201ENST00000447155 NOTCH1P46531 2555 aa2.04□□□□□ -2.08
HMGB1P16-201ENST00000447155 KRTAP13-4Q3LI77 160 aa2.04□□□□□ -2.08
HMGB1P16-201ENST00000447155 VPS13DQ5THJ4 4388 aa2.04□□□□□ -2.08
HMGB1P16-201ENST00000447155 STAB2Q8WWQ8 2551 aa2.04□□□□□ -2.08
HMGB1P16-201ENST00000447155 ZNF469Q96JG9 3925 aaPredicted RBP2.03□□□□□ -2.08
HMGB1P16-201ENST00000447155 KRTAP12-1P59990 96 aa2.03□□□□□ -2.08
HMGB1P16-201ENST00000447155 PRKDCP78527 4128 aaKnown RBP2.03□□□□□ -2.08
HMGB1P16-201ENST00000447155 MGAM2Q2M2H8 2515 aa2.02□□□□□ -2.09
HMGB1P16-201ENST00000447155 DNAH7Q8WXX0 4024 aa2.02□□□□□ -2.09
HMGB1P16-201ENST00000447155 LYSTQ99698 3801 aa2.02□□□□□ -2.09
HMGB1P16-201ENST00000447155 FRAS1Q86XX4 4008 aa2.01□□□□□ -2.09
HMGB1P16-201ENST00000447155 CSMD3Q7Z407 3707 aa2.01□□□□□ -2.09
HMGB1P16-201ENST00000447155 DYNC2H1Q8NCM8 4307 aaKnown RBP2□□□□□ -2.09
HMGB1P16-201ENST00000447155 DNAH10Q8IVF4 4471 aa2□□□□□ -2.09
HMGB1P16-201ENST00000447155 HECTD4Q9Y4D8 3996 aa1.99□□□□□ -2.09
HMGB1P16-201ENST00000447155 PRO2289Q9P1D8 64 aa1.99□□□□□ -2.09
HMGB1P16-201ENST00000447155 DNAH8Q96JB1 4490 aa1.99□□□□□ -2.09
HMGB1P16-201ENST00000447155 CMYA5Q8N3K9 4069 aa1.97□□□□□ -2.09
HMGB1P16-201ENST00000447155 HUWE1Q7Z6Z7 4374 aaKnown RBP1.97□□□□□ -2.09
HMGB1P16-201ENST00000447155 INE1O15225 51 aa1.97□□□□□ -2.09
HMGB1P16-201ENST00000447155 DNAH6Q9C0G6 4158 aa1.97□□□□□ -2.09
HMGB1P16-201ENST00000447155 COL7A1Q02388 2944 aa1.97□□□□□ -2.09
HMGB1P16-201ENST00000447155 DNAH9Q9NYC9 4486 aa1.96□□□□□ -2.1
HMGB1P16-201ENST00000447155 DNAH17Q9UFH2 4485 aa1.95□□□□□ -2.1
HMGB1P16-201ENST00000447155 STAB1Q9NY15 2570 aa1.95□□□□□ -2.1
HMGB1P16-201ENST00000447155 KRTAP6-3Q3LI67 103 aa1.93□□□□□ -2.1
HMGB1P16-201ENST00000447155 DMBT1Q9UGM3 2413 aaPredicted RBP1.92□□□□□ -2.1
HMGB1P16-201ENST00000447155 FBN3Q75N90 2809 aa1.91□□□□□ -2.1
HMGB1P16-201ENST00000447155 TNP1P09430 55 aa1.89□□□□□ -2.11
HMGB1P16-201ENST00000447155 Q5VSD8 79 aa1.89□□□□□ -2.11
HMGB1P16-201ENST00000447155 KMT2AQ03164 3969 aa1.88□□□□□ -2.11
HMGB1P16-201ENST00000447155 DNAH11Q96DT5 4516 aa1.88□□□□□ -2.11
HMGB1P16-201ENST00000447155 DNAH2Q9P225 4427 aa1.87□□□□□ -2.11
HMGB1P16-201ENST00000447155 KRTAP12-3P60328 96 aa1.87□□□□□ -2.11
HMGB1P16-201ENST00000447155 PKHD1L1Q86WI1 4243 aa1.84□□□□□ -2.12
HMGB1P16-201ENST00000447155 PLECQ15149 4684 aaKnown RBP1.82□□□□□ -2.12
HMGB1P16-201ENST00000447155 PKHD1P08F94 4074 aa1.82□□□□□ -2.12
HMGB1P16-201ENST00000447155 SACSQ9NZJ4 4579 aa1.81□□□□□ -2.12
HMGB1P16-201ENST00000447155 VPS13BQ7Z7G8 4022 aa1.8□□□□□ -2.12
HMGB1P16-201ENST00000447155 STARD9Q9P2P6 4700 aa1.79□□□□□ -2.12
HMGB1P16-201ENST00000447155 SMR3BP02814 79 aaPredicted RBP1.79□□□□□ -2.12
HMGB1P16-201ENST00000447155 KRTAP12-4P60329 112 aa1.79□□□□□ -2.12
HMGB1P16-201ENST00000447155 DNAH5Q8TE73 4624 aa1.79□□□□□ -2.12
HMGB1P16-201ENST00000447155 TNXBP22105 4242 aa1.77□□□□□ -2.13
HMGB1P16-201ENST00000447155 PKD1P98161 4303 aa1.77□□□□□ -2.13
HMGB1P16-201ENST00000447155 KRTAP10-4P60372 401 aaPredicted RBP1.77□□□□□ -2.13
HMGB1P16-201ENST00000447155 APOBP04114 4563 aaKnown RBP1.75□□□□□ -2.13
HMGB1P16-201ENST00000447155 KRTAP5-7Q6L8G8 165 aa1.74□□□□□ -2.13
HMGB1P16-201ENST00000447155 FAT2Q9NYQ8 4349 aa1.73□□□□□ -2.13
HMGB1P16-201ENST00000447155 FLGP20930 4061 aaPredicted RBP1.72□□□□□ -2.13
HMGB1P16-201ENST00000447155 LRP1BQ9NZR2 4599 aa1.72□□□□□ -2.13
HMGB1P16-201ENST00000447155 LRP1Q07954 4544 aaKnown RBP1.71□□□□□ -2.14
HMGB1P16-201ENST00000447155 HSPG2P98160 4391 aa1.7□□□□□ -2.14
HMGB1P16-201ENST00000447155 MYCBP2O75592 4640 aa1.67□□□□□ -2.14
HMGB1P16-201ENST00000447155 DYNC1H1Q14204 4646 aaKnown RBP1.65□□□□□ -2.14
HMGB1P16-201ENST00000447155 FAT3Q8TDW7 4589 aa1.65□□□□□ -2.14
HMGB1P16-201ENST00000447155 FAT1Q14517 4588 aa1.64□□□□□ -2.15
HMGB1P16-201ENST00000447155 KRTAP8-1Q8IUC2 63 aa1.63□□□□□ -2.15
HMGB1P16-201ENST00000447155 MT1HL1P0DM35 61 aa1.61□□□□□ -2.15
HMGB1P16-201ENST00000447155 MUC19Q7Z5P9 8384 aa1.59□□□□□ -2.15
HMGB1P16-201ENST00000447155 SPRR2GQ9BYE4 73 aa1.57□□□□□ -2.16
HMGB1P16-201ENST00000447155 KRTAP21-3Q3LHN1 58 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms