RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 TPRXLQ17RH7 258 aa2.15□□□□□ -2.07
HMGB1P16-201ENST00000447155 R4GN34 69 aa2.15□□□□□ -2.07
HMGB1P16-201ENST00000447155 TEP1Q99973 2627 aaKnown RBP2.14□□□□□ -2.07
HMGB1P16-201ENST00000447155 FASNP49327 2511 aaKnown RBP2.14□□□□□ -2.07
HMGB1P16-201ENST00000447155 TENM3Q9P273 2699 aa2.14□□□□□ -2.07
HMGB1P16-201ENST00000447155 MAST4O15021 2626 aa2.13□□□□□ -2.07
HMGB1P16-201ENST00000447155 A0A0D9SG42 100 aa2.13□□□□□ -2.07
HMGB1P16-201ENST00000447155 S4R3F8 94 aa2.13□□□□□ -2.07
HMGB1P16-201ENST00000447155 NSD1Q96L73 2696 aaPredicted RBP2.12□□□□□ -2.07
HMGB1P16-201ENST00000447155 NBEAL1Q6ZS30 2694 aa2.12□□□□□ -2.07
HMGB1P16-201ENST00000447155 SRRM2Q9UQ35 2752 aaKnown RBP2.11□□□□□ -2.07
HMGB1P16-201ENST00000447155 SMR3AQ99954 134 aa2.11□□□□□ -2.07
HMGB1P16-201ENST00000447155 C10orf95Q9H7T3 257 aa2.11□□□□□ -2.07
HMGB1P16-201ENST00000447155 ACANP16112 2415 aa2.11□□□□□ -2.07
HMGB1P16-201ENST00000447155 USP24Q9UPU5 2620 aa2.11□□□□□ -2.07
HMGB1P16-201ENST00000447155 MEGF8Q7Z7M0 2845 aa2.11□□□□□ -2.07
HMGB1P16-201ENST00000447155 ATRQ13535 2644 aa2.1□□□□□ -2.07
HMGB1P16-201ENST00000447155 KRTAP10-1P60331 282 aa2.1□□□□□ -2.07
HMGB1P16-201ENST00000447155 TGP01266 2768 aa2.1□□□□□ -2.07
HMGB1P16-201ENST00000447155 PKD1L1Q8TDX9 2849 aa2.1□□□□□ -2.07
HMGB1P16-201ENST00000447155 J3QKU1 62 aa2.09□□□□□ -2.07
HMGB1P16-201ENST00000447155 KRTAP5-8O75690 187 aa2.09□□□□□ -2.07
HMGB1P16-201ENST00000447155 PLAC4Q8WY50 150 aa2.09□□□□□ -2.07
HMGB1P16-201ENST00000447155 CUBNO60494 3623 aa2.08□□□□□ -2.08
HMGB1P16-201ENST00000447155 M0QZ58 72 aa2.08□□□□□ -2.08
HMGB1P16-201ENST00000447155 LCE1CQ5T751 118 aa2.08□□□□□ -2.08
HMGB1P16-201ENST00000447155 LCE1BQ5T7P3 118 aa2.08□□□□□ -2.08
HMGB1P16-201ENST00000447155 PDZD2O15018 2839 aa2.08□□□□□ -2.08
HMGB1P16-201ENST00000447155 FBN1P35555 2871 aaKnown RBP2.08□□□□□ -2.08
HMGB1P16-201ENST00000447155 TRRAPQ9Y4A5 3859 aa2.07□□□□□ -2.08
HMGB1P16-201ENST00000447155 ANK2Q01484 3957 aa2.07□□□□□ -2.08
HMGB1P16-201ENST00000447155 ITPR2Q14571 2701 aa2.07□□□□□ -2.08
HMGB1P16-201ENST00000447155 DNAH3Q8TD57 4116 aa2.07□□□□□ -2.08
HMGB1P16-201ENST00000447155 FLG2Q5D862 2391 aaPredicted RBP2.07□□□□□ -2.08
HMGB1P16-201ENST00000447155 FLNBO75369 2602 aaKnown RBP2.06□□□□□ -2.08
HMGB1P16-201ENST00000447155 TENM1Q9UKZ4 2725 aa2.06□□□□□ -2.08
HMGB1P16-201ENST00000447155 C9orf92A6NGG3 77 aa2.05□□□□□ -2.08
HMGB1P16-201ENST00000447155 COL6A5A8TX70 2615 aa2.05□□□□□ -2.08
HMGB1P16-201ENST00000447155 NOTCH1P46531 2555 aa2.04□□□□□ -2.08
HMGB1P16-201ENST00000447155 KRTAP13-4Q3LI77 160 aa2.04□□□□□ -2.08
HMGB1P16-201ENST00000447155 VPS13DQ5THJ4 4388 aa2.04□□□□□ -2.08
HMGB1P16-201ENST00000447155 STAB2Q8WWQ8 2551 aa2.04□□□□□ -2.08
HMGB1P16-201ENST00000447155 ZNF469Q96JG9 3925 aaPredicted RBP2.03□□□□□ -2.08
HMGB1P16-201ENST00000447155 KRTAP12-1P59990 96 aa2.03□□□□□ -2.08
HMGB1P16-201ENST00000447155 PRKDCP78527 4128 aaKnown RBP2.03□□□□□ -2.08
HMGB1P16-201ENST00000447155 MGAM2Q2M2H8 2515 aa2.02□□□□□ -2.09
HMGB1P16-201ENST00000447155 DNAH7Q8WXX0 4024 aa2.02□□□□□ -2.09
HMGB1P16-201ENST00000447155 LYSTQ99698 3801 aa2.02□□□□□ -2.09
HMGB1P16-201ENST00000447155 FRAS1Q86XX4 4008 aa2.01□□□□□ -2.09
HMGB1P16-201ENST00000447155 CSMD3Q7Z407 3707 aa2.01□□□□□ -2.09
HMGB1P16-201ENST00000447155 DYNC2H1Q8NCM8 4307 aaKnown RBP2□□□□□ -2.09
HMGB1P16-201ENST00000447155 DNAH10Q8IVF4 4471 aa2□□□□□ -2.09
HMGB1P16-201ENST00000447155 HECTD4Q9Y4D8 3996 aa1.99□□□□□ -2.09
HMGB1P16-201ENST00000447155 PRO2289Q9P1D8 64 aa1.99□□□□□ -2.09
HMGB1P16-201ENST00000447155 DNAH8Q96JB1 4490 aa1.99□□□□□ -2.09
HMGB1P16-201ENST00000447155 CMYA5Q8N3K9 4069 aa1.97□□□□□ -2.09
HMGB1P16-201ENST00000447155 HUWE1Q7Z6Z7 4374 aaKnown RBP1.97□□□□□ -2.09
HMGB1P16-201ENST00000447155 INE1O15225 51 aa1.97□□□□□ -2.09
HMGB1P16-201ENST00000447155 DNAH6Q9C0G6 4158 aa1.97□□□□□ -2.09
HMGB1P16-201ENST00000447155 COL7A1Q02388 2944 aa1.97□□□□□ -2.09
HMGB1P16-201ENST00000447155 DNAH9Q9NYC9 4486 aa1.96□□□□□ -2.1
HMGB1P16-201ENST00000447155 DNAH17Q9UFH2 4485 aa1.95□□□□□ -2.1
HMGB1P16-201ENST00000447155 STAB1Q9NY15 2570 aa1.95□□□□□ -2.1
HMGB1P16-201ENST00000447155 KRTAP6-3Q3LI67 103 aa1.93□□□□□ -2.1
HMGB1P16-201ENST00000447155 DMBT1Q9UGM3 2413 aaPredicted RBP1.92□□□□□ -2.1
HMGB1P16-201ENST00000447155 FBN3Q75N90 2809 aa1.91□□□□□ -2.1
HMGB1P16-201ENST00000447155 TNP1P09430 55 aa1.89□□□□□ -2.11
HMGB1P16-201ENST00000447155 Q5VSD8 79 aa1.89□□□□□ -2.11
HMGB1P16-201ENST00000447155 KMT2AQ03164 3969 aa1.88□□□□□ -2.11
HMGB1P16-201ENST00000447155 DNAH11Q96DT5 4516 aa1.88□□□□□ -2.11
HMGB1P16-201ENST00000447155 DNAH2Q9P225 4427 aa1.87□□□□□ -2.11
HMGB1P16-201ENST00000447155 KRTAP12-3P60328 96 aa1.87□□□□□ -2.11
HMGB1P16-201ENST00000447155 PKHD1L1Q86WI1 4243 aa1.84□□□□□ -2.12
HMGB1P16-201ENST00000447155 PLECQ15149 4684 aaKnown RBP1.82□□□□□ -2.12
HMGB1P16-201ENST00000447155 PKHD1P08F94 4074 aa1.82□□□□□ -2.12
HMGB1P16-201ENST00000447155 SACSQ9NZJ4 4579 aa1.81□□□□□ -2.12
HMGB1P16-201ENST00000447155 VPS13BQ7Z7G8 4022 aa1.8□□□□□ -2.12
HMGB1P16-201ENST00000447155 STARD9Q9P2P6 4700 aa1.79□□□□□ -2.12
HMGB1P16-201ENST00000447155 SMR3BP02814 79 aaPredicted RBP1.79□□□□□ -2.12
HMGB1P16-201ENST00000447155 KRTAP12-4P60329 112 aa1.79□□□□□ -2.12
HMGB1P16-201ENST00000447155 DNAH5Q8TE73 4624 aa1.79□□□□□ -2.12
HMGB1P16-201ENST00000447155 TNXBP22105 4242 aa1.77□□□□□ -2.13
HMGB1P16-201ENST00000447155 PKD1P98161 4303 aa1.77□□□□□ -2.13
HMGB1P16-201ENST00000447155 KRTAP10-4P60372 401 aaPredicted RBP1.77□□□□□ -2.13
HMGB1P16-201ENST00000447155 APOBP04114 4563 aaKnown RBP1.75□□□□□ -2.13
HMGB1P16-201ENST00000447155 KRTAP5-7Q6L8G8 165 aa1.74□□□□□ -2.13
HMGB1P16-201ENST00000447155 FAT2Q9NYQ8 4349 aa1.73□□□□□ -2.13
HMGB1P16-201ENST00000447155 FLGP20930 4061 aaPredicted RBP1.72□□□□□ -2.13
HMGB1P16-201ENST00000447155 LRP1BQ9NZR2 4599 aa1.72□□□□□ -2.13
HMGB1P16-201ENST00000447155 LRP1Q07954 4544 aaKnown RBP1.71□□□□□ -2.14
HMGB1P16-201ENST00000447155 HSPG2P98160 4391 aa1.7□□□□□ -2.14
HMGB1P16-201ENST00000447155 MYCBP2O75592 4640 aa1.67□□□□□ -2.14
HMGB1P16-201ENST00000447155 DYNC1H1Q14204 4646 aaKnown RBP1.65□□□□□ -2.14
HMGB1P16-201ENST00000447155 FAT3Q8TDW7 4589 aa1.65□□□□□ -2.14
HMGB1P16-201ENST00000447155 FAT1Q14517 4588 aa1.64□□□□□ -2.15
HMGB1P16-201ENST00000447155 KRTAP8-1Q8IUC2 63 aa1.63□□□□□ -2.15
HMGB1P16-201ENST00000447155 MT1HL1P0DM35 61 aa1.61□□□□□ -2.15
HMGB1P16-201ENST00000447155 MUC19Q7Z5P9 8384 aa1.59□□□□□ -2.15
HMGB1P16-201ENST00000447155 SPRR2GQ9BYE4 73 aa1.57□□□□□ -2.16
HMGB1P16-201ENST00000447155 KRTAP21-3Q3LHN1 58 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms