RNA–Protein interactions for RNA: ENST00000447016.6

PRDM15-206, Transcript of PR/SET domain 15, humanhuman

TSL 1 (best)

Gene PRDM15, Length 4,992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-206ENST00000447016 HUWE1Q7Z6Z7 4374 aaKnown RBP5.58□□□□□ -1.52
PRDM15-206ENST00000447016 CSMD3Q7Z407 3707 aa5.57□□□□□ -1.52
PRDM15-206ENST00000447016 LORP23490 312 aaPredicted RBP5.56□□□□□ -1.52
PRDM15-206ENST00000447016 KRTAP4-5Q9BYR2 181 aa5.43□□□□□ -1.54
PRDM15-206ENST00000447016 KRTAP10-5P60370 271 aa5.42□□□□□ -1.54
PRDM15-206ENST00000447016 DNAH9Q9NYC9 4486 aa5.37□□□□□ -1.55
PRDM15-206ENST00000447016 KRTAP8-1Q8IUC2 63 aa5.33□□□□□ -1.56
PRDM15-206ENST00000447016 DNAH10Q8IVF4 4471 aa5.32□□□□□ -1.56
PRDM15-206ENST00000447016 PLECQ15149 4684 aaKnown RBP5.3□□□□□ -1.56
PRDM15-206ENST00000447016 SPRR2GQ9BYE4 73 aa5.25□□□□□ -1.57
PRDM15-206ENST00000447016 DNAH1Q9P2D7 4330 aa5.23□□□□□ -1.57
PRDM15-206ENST00000447016 KRTAP19-4Q3LI73 84 aa5.2□□□□□ -1.58
PRDM15-206ENST00000447016 ANK2Q01484 3957 aa5.2□□□□□ -1.58
PRDM15-206ENST00000447016 ALMS1Q8TCU4 4167 aa5.17□□□□□ -1.58
PRDM15-206ENST00000447016 STARD9Q9P2P6 4700 aa5.17□□□□□ -1.58
PRDM15-206ENST00000447016 KRTAP4-1Q9BYQ7 146 aa5.16□□□□□ -1.58
PRDM15-206ENST00000447016 DNAH11Q96DT5 4516 aa5.14□□□□□ -1.59
PRDM15-206ENST00000447016 MT2AP02795 61 aa5.13□□□□□ -1.59
PRDM15-206ENST00000447016 DNHD1Q96M86 4753 aa5.13□□□□□ -1.59
PRDM15-206ENST00000447016 DNAH2Q9P225 4427 aa5.12□□□□□ -1.59
PRDM15-206ENST00000447016 VPS13DQ5THJ4 4388 aa5.12□□□□□ -1.59
PRDM15-206ENST00000447016 MT1HP80294 61 aa5.12□□□□□ -1.59
PRDM15-206ENST00000447016 PRKDCP78527 4128 aaKnown RBP5.11□□□□□ -1.59
PRDM15-206ENST00000447016 DNAH5Q8TE73 4624 aa5.11□□□□□ -1.59
PRDM15-206ENST00000447016 CMYA5Q8N3K9 4069 aa5.11□□□□□ -1.59
PRDM15-206ENST00000447016 LYSTQ99698 3801 aa5.09□□□□□ -1.59
PRDM15-206ENST00000447016 LCE3CQ5T5A8 94 aa5.08□□□□□ -1.6
PRDM15-206ENST00000447016 KMT2AQ03164 3969 aa5.07□□□□□ -1.6
PRDM15-206ENST00000447016 DNAH17Q9UFH2 4485 aa5.06□□□□□ -1.6
PRDM15-206ENST00000447016 DNAH3Q8TD57 4116 aa5.06□□□□□ -1.6
PRDM15-206ENST00000447016 FAT1Q14517 4588 aa5.05□□□□□ -1.6
PRDM15-206ENST00000447016 KRTAP19-5Q3LI72 72 aa5.04□□□□□ -1.6
PRDM15-206ENST00000447016 DNAH8Q96JB1 4490 aa4.98□□□□□ -1.61
PRDM15-206ENST00000447016 MT1FP04733 61 aa4.98□□□□□ -1.61
PRDM15-206ENST00000447016 KRTAP10-7P60409 375 aaPredicted RBP4.97□□□□□ -1.61
PRDM15-206ENST00000447016 DNAH7Q8WXX0 4024 aa4.96□□□□□ -1.62
PRDM15-206ENST00000447016 LRP1BQ9NZR2 4599 aa4.95□□□□□ -1.62
PRDM15-206ENST00000447016 FRAS1Q86XX4 4008 aa4.94□□□□□ -1.62
PRDM15-206ENST00000447016 DYNC1H1Q14204 4646 aaKnown RBP4.92□□□□□ -1.62
PRDM15-206ENST00000447016 DYNC2H1Q8NCM8 4307 aaKnown RBP4.91□□□□□ -1.62
PRDM15-206ENST00000447016 DNAH6Q9C0G6 4158 aa4.86□□□□□ -1.63
PRDM15-206ENST00000447016 SPRR2FQ96RM1 72 aa4.86□□□□□ -1.63
PRDM15-206ENST00000447016 VPS13BQ7Z7G8 4022 aa4.86□□□□□ -1.63
PRDM15-206ENST00000447016 KRTAP19-8Q3LI54 63 aa4.85□□□□□ -1.63
PRDM15-206ENST00000447016 HECTD4Q9Y4D8 3996 aa4.85□□□□□ -1.63
PRDM15-206ENST00000447016 SPRR5A0A1B0GTR4 108 aa4.8□□□□□ -1.64
PRDM15-206ENST00000447016 FAT2Q9NYQ8 4349 aa4.79□□□□□ -1.64
PRDM15-206ENST00000447016 SACSQ9NZJ4 4579 aa4.78□□□□□ -1.64
PRDM15-206ENST00000447016 KRTAP19-1Q8IUB9 90 aa4.78□□□□□ -1.64
PRDM15-206ENST00000447016 HYDINQ4G0P3 5121 aa4.76□□□□□ -1.65
PRDM15-206ENST00000447016 RYR1P21817 5038 aa4.71□□□□□ -1.65
PRDM15-206ENST00000447016 KRTAP12-4P60329 112 aa4.7□□□□□ -1.66
PRDM15-206ENST00000447016 LRP1Q07954 4544 aaKnown RBP4.68□□□□□ -1.66
PRDM15-206ENST00000447016 MYCBP2O75592 4640 aa4.68□□□□□ -1.66
PRDM15-206ENST00000447016 MT1XP80297 61 aa4.67□□□□□ -1.66
PRDM15-206ENST00000447016 PKHD1P08F94 4074 aa4.65□□□□□ -1.66
PRDM15-206ENST00000447016 APOBP04114 4563 aaKnown RBP4.65□□□□□ -1.66
PRDM15-206ENST00000447016 KIAA1109Q2LD37 5005 aa4.64□□□□□ -1.67
PRDM15-206ENST00000447016 FAT3Q8TDW7 4589 aa4.64□□□□□ -1.67
PRDM15-206ENST00000447016 LCE3BQ5TA77 95 aa4.62□□□□□ -1.67
PRDM15-206ENST00000447016 RYR3Q15413 4870 aa4.61□□□□□ -1.67
PRDM15-206ENST00000447016 KRTAP17-1Q9BYP8 105 aa4.6□□□□□ -1.67
PRDM15-206ENST00000447016 MT1BP07438 61 aa4.59□□□□□ -1.67
PRDM15-206ENST00000447016 RYR2Q92736 4967 aa4.58□□□□□ -1.68
PRDM15-206ENST00000447016 MT1GP13640 62 aa4.55□□□□□ -1.68
PRDM15-206ENST00000447016 PKD1P98161 4303 aa4.53□□□□□ -1.68
PRDM15-206ENST00000447016 LCE3DQ9BYE3 92 aa4.51□□□□□ -1.69
PRDM15-206ENST00000447016 SPRR2EP22531 72 aa4.5□□□□□ -1.69
PRDM15-206ENST00000447016 SPRR2BP35325 72 aa4.5□□□□□ -1.69
PRDM15-206ENST00000447016 SPRR2AP35326 72 aa4.5□□□□□ -1.69
PRDM15-206ENST00000447016 LCE3EQ5T5B0 92 aa4.48□□□□□ -1.69
PRDM15-206ENST00000447016 KRTAP9-8Q9BYQ0 159 aa4.48□□□□□ -1.69
PRDM15-206ENST00000447016 HSPG2P98160 4391 aa4.45□□□□□ -1.7
PRDM15-206ENST00000447016 KMT2CQ8NEZ4 4911 aaKnown RBP4.45□□□□□ -1.7
PRDM15-206ENST00000447016 HERC1Q15751 4861 aa4.42□□□□□ -1.7
PRDM15-206ENST00000447016 LCE2BO14633 110 aa4.41□□□□□ -1.7
PRDM15-206ENST00000447016 KRTAP4-8A0A0G2JLE6 195 aa4.4□□□□□ -1.71
PRDM15-206ENST00000447016 KRTAP4-8Q9BYQ9 185 aa4.4□□□□□ -1.71
PRDM15-206ENST00000447016 KRTAP9-3Q9BYQ3 159 aa4.39□□□□□ -1.71
PRDM15-206ENST00000447016 LRP2P98164 4655 aa4.38□□□□□ -1.71
PRDM15-206ENST00000447016 SPRR2DP22532 72 aa4.36□□□□□ -1.71
PRDM15-206ENST00000447016 MT1LQ93083 61 aa4.36□□□□□ -1.71
PRDM15-206ENST00000447016 LCE2CQ5TA81 110 aa4.34□□□□□ -1.72
PRDM15-206ENST00000447016 LPAP08519 4548 aa4.33□□□□□ -1.72
PRDM15-206ENST00000447016 HERC2O95714 4834 aa4.32□□□□□ -1.72
PRDM15-206ENST00000447016 KRTAP19-3Q7Z4W3 81 aa4.31□□□□□ -1.72
PRDM15-206ENST00000447016 PKHD1L1Q86WI1 4243 aa4.3□□□□□ -1.72
PRDM15-206ENST00000447016 TNXBP22105 4242 aa4.29□□□□□ -1.72
PRDM15-206ENST00000447016 EPPK1P58107 5090 aaKnown RBP4.24□□□□□ -1.73
PRDM15-206ENST00000447016 MT1EP04732 61 aa4.24□□□□□ -1.73
PRDM15-206ENST00000447016 BIRC6Q9NR09 4857 aa4.2□□□□□ -1.74
PRDM15-206ENST00000447016 KRTAP4-7Q9BYR0 210 aa4.18□□□□□ -1.74
PRDM15-206ENST00000447016 MT3P25713 68 aa4.14□□□□□ -1.75
PRDM15-206ENST00000447016 ABCA13Q86UQ4 5058 aa4.13□□□□□ -1.75
PRDM15-206ENST00000447016 KRTAP19-2Q3LHN2 52 aa4.11□□□□□ -1.75
PRDM15-206ENST00000447016 PRM1P04553 51 aa4.1□□□□□ -1.75
PRDM15-206ENST00000447016 MT1MQ8N339 61 aa4.1□□□□□ -1.75
PRDM15-206ENST00000447016 SYNE1Q8NF91 8797 aaKnown RBP4.07□□□□□ -1.76
PRDM15-206ENST00000447016 PCLOQ9Y6V0 5065 aa4.03□□□□□ -1.76
PRDM15-206ENST00000447016 LCE2DQ5TA82 110 aaPredicted RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms