RNA–Protein interactions for RNA: ENST00000446716.5

ATG9A-215, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 5,245 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-215ENST00000446716 VPS13CQ709C8 3753 aa7.67□□□□□ -1.18
ATG9A-215ENST00000446716 ZNF469Q96JG9 3925 aaPredicted RBP7.65□□□□□ -1.18
ATG9A-215ENST00000446716 KRTAP12-3P60328 96 aa7.63□□□□□ -1.19
ATG9A-215ENST00000446716 LORP23490 312 aaPredicted RBP7.61□□□□□ -1.19
ATG9A-215ENST00000446716 DNAH11Q96DT5 4516 aa7.56□□□□□ -1.2
ATG9A-215ENST00000446716 AKAP9Q99996 3911 aa7.52□□□□□ -1.21
ATG9A-215ENST00000446716 LCE3AQ5TA76 89 aa7.51□□□□□ -1.21
ATG9A-215ENST00000446716 KRTAP4-1Q9BYQ7 146 aa7.51□□□□□ -1.21
ATG9A-215ENST00000446716 CSMD3Q7Z407 3707 aa7.5□□□□□ -1.21
ATG9A-215ENST00000446716 INE1O15225 51 aa7.49□□□□□ -1.21
ATG9A-215ENST00000446716 KRTAP8-1Q8IUC2 63 aa7.49□□□□□ -1.21
ATG9A-215ENST00000446716 DNAH1Q9P2D7 4330 aa7.46□□□□□ -1.22
ATG9A-215ENST00000446716 MT1HP80294 61 aa7.46□□□□□ -1.22
ATG9A-215ENST00000446716 DNAH10Q8IVF4 4471 aa7.44□□□□□ -1.22
ATG9A-215ENST00000446716 KRTAP23-1A1A580 65 aa7.42□□□□□ -1.22
ATG9A-215ENST00000446716 RYR1P21817 5038 aa7.39□□□□□ -1.23
ATG9A-215ENST00000446716 DYNC1H1Q14204 4646 aaKnown RBP7.38□□□□□ -1.23
ATG9A-215ENST00000446716 MT2AP02795 61 aa7.33□□□□□ -1.24
ATG9A-215ENST00000446716 FAT1Q14517 4588 aa7.29□□□□□ -1.24
ATG9A-215ENST00000446716 VPS13DQ5THJ4 4388 aa7.26□□□□□ -1.25
ATG9A-215ENST00000446716 LRP1BQ9NZR2 4599 aa7.26□□□□□ -1.25
ATG9A-215ENST00000446716 DNAH17Q9UFH2 4485 aa7.21□□□□□ -1.26
ATG9A-215ENST00000446716 SPRR2GQ9BYE4 73 aa7.16□□□□□ -1.26
ATG9A-215ENST00000446716 MT1FP04733 61 aa7.16□□□□□ -1.26
ATG9A-215ENST00000446716 SACSQ9NZJ4 4579 aa7.15□□□□□ -1.26
ATG9A-215ENST00000446716 DNAH2Q9P225 4427 aa7.14□□□□□ -1.27
ATG9A-215ENST00000446716 STARD9Q9P2P6 4700 aa7.13□□□□□ -1.27
ATG9A-215ENST00000446716 FAT2Q9NYQ8 4349 aa7.08□□□□□ -1.28
ATG9A-215ENST00000446716 KIAA1109Q2LD37 5005 aa7.04□□□□□ -1.28
ATG9A-215ENST00000446716 KRTAP10-5P60370 271 aa7.04□□□□□ -1.28
ATG9A-215ENST00000446716 DNAH8Q96JB1 4490 aa7.03□□□□□ -1.28
ATG9A-215ENST00000446716 SPRR2FQ96RM1 72 aa7.03□□□□□ -1.28
ATG9A-215ENST00000446716 PRKDCP78527 4128 aaKnown RBP7.01□□□□□ -1.29
ATG9A-215ENST00000446716 RYR3Q15413 4870 aa7□□□□□ -1.29
ATG9A-215ENST00000446716 DYNC2H1Q8NCM8 4307 aaKnown RBP6.98□□□□□ -1.29
ATG9A-215ENST00000446716 APOBP04114 4563 aaKnown RBP6.93□□□□□ -1.3
ATG9A-215ENST00000446716 KRTAP17-1Q9BYP8 105 aa6.92□□□□□ -1.3
ATG9A-215ENST00000446716 ANK2Q01484 3957 aa6.88□□□□□ -1.31
ATG9A-215ENST00000446716 KRTAP10-7P60409 375 aaPredicted RBP6.87□□□□□ -1.31
ATG9A-215ENST00000446716 KRTAP19-5Q3LI72 72 aa6.83□□□□□ -1.32
ATG9A-215ENST00000446716 VPS13BQ7Z7G8 4022 aa6.83□□□□□ -1.32
ATG9A-215ENST00000446716 DNAH3Q8TD57 4116 aa6.78□□□□□ -1.32
ATG9A-215ENST00000446716 MYCBP2O75592 4640 aa6.74□□□□□ -1.33
ATG9A-215ENST00000446716 RYR2Q92736 4967 aa6.74□□□□□ -1.33
ATG9A-215ENST00000446716 KMT2AQ03164 3969 aa6.72□□□□□ -1.33
ATG9A-215ENST00000446716 LYSTQ99698 3801 aa6.72□□□□□ -1.33
ATG9A-215ENST00000446716 KRTAP19-8Q3LI54 63 aa6.69□□□□□ -1.34
ATG9A-215ENST00000446716 KRTAP19-1Q8IUB9 90 aa6.69□□□□□ -1.34
ATG9A-215ENST00000446716 HERC2O95714 4834 aa6.68□□□□□ -1.34
ATG9A-215ENST00000446716 FAT3Q8TDW7 4589 aa6.68□□□□□ -1.34
ATG9A-215ENST00000446716 BIRC6Q9NR09 4857 aa6.67□□□□□ -1.34
ATG9A-215ENST00000446716 LCE3CQ5T5A8 94 aa6.62□□□□□ -1.35
ATG9A-215ENST00000446716 SPRR2EP22531 72 aa6.61□□□□□ -1.35
ATG9A-215ENST00000446716 SPRR2BP35325 72 aa6.61□□□□□ -1.35
ATG9A-215ENST00000446716 SPRR2AP35326 72 aa6.61□□□□□ -1.35
ATG9A-215ENST00000446716 LRP1Q07954 4544 aaKnown RBP6.58□□□□□ -1.36
ATG9A-215ENST00000446716 KRTAP19-4Q3LI73 84 aa6.57□□□□□ -1.36
ATG9A-215ENST00000446716 CMYA5Q8N3K9 4069 aa6.57□□□□□ -1.36
ATG9A-215ENST00000446716 PCLOQ9Y6V0 5065 aa6.56□□□□□ -1.36
ATG9A-215ENST00000446716 KRTAP9-8Q9BYQ0 159 aa6.53□□□□□ -1.36
ATG9A-215ENST00000446716 MT1BP07438 61 aa6.48□□□□□ -1.37
ATG9A-215ENST00000446716 MT1XP80297 61 aa6.48□□□□□ -1.37
ATG9A-215ENST00000446716 DNAH6Q9C0G6 4158 aa6.46□□□□□ -1.38
ATG9A-215ENST00000446716 HERC1Q15751 4861 aa6.44□□□□□ -1.38
ATG9A-215ENST00000446716 LCE2CQ5TA81 110 aa6.44□□□□□ -1.38
ATG9A-215ENST00000446716 DNAH7Q8WXX0 4024 aa6.4□□□□□ -1.39
ATG9A-215ENST00000446716 SPRR2DP22532 72 aa6.4□□□□□ -1.39
ATG9A-215ENST00000446716 KRTAP9-3Q9BYQ3 159 aa6.39□□□□□ -1.39
ATG9A-215ENST00000446716 PKD1P98161 4303 aa6.37□□□□□ -1.39
ATG9A-215ENST00000446716 LRP2P98164 4655 aa6.34□□□□□ -1.39
ATG9A-215ENST00000446716 LCE2BO14633 110 aa6.34□□□□□ -1.39
ATG9A-215ENST00000446716 HYDINQ4G0P3 5121 aa6.32□□□□□ -1.4
ATG9A-215ENST00000446716 HSPG2P98160 4391 aa6.3□□□□□ -1.4
ATG9A-215ENST00000446716 KRTAP4-8A0A0G2JLE6 195 aa6.29□□□□□ -1.4
ATG9A-215ENST00000446716 KRTAP4-8Q9BYQ9 185 aa6.29□□□□□ -1.4
ATG9A-215ENST00000446716 EPPK1P58107 5090 aaKnown RBP6.28□□□□□ -1.4
ATG9A-215ENST00000446716 HECTD4Q9Y4D8 3996 aa6.27□□□□□ -1.41
ATG9A-215ENST00000446716 FRAS1Q86XX4 4008 aa6.26□□□□□ -1.41
ATG9A-215ENST00000446716 MT1GP13640 62 aa6.23□□□□□ -1.41
ATG9A-215ENST00000446716 KRTAP12-4P60329 112 aa6.2□□□□□ -1.42
ATG9A-215ENST00000446716 LCE3BQ5TA77 95 aa6.2□□□□□ -1.42
ATG9A-215ENST00000446716 PKHD1L1Q86WI1 4243 aa6.18□□□□□ -1.42
ATG9A-215ENST00000446716 PKHD1P08F94 4074 aa6.11□□□□□ -1.43
ATG9A-215ENST00000446716 KRTAP19-2Q3LHN2 52 aa6.1□□□□□ -1.43
ATG9A-215ENST00000446716 KMT2CQ8NEZ4 4911 aaKnown RBP6.06□□□□□ -1.44
ATG9A-215ENST00000446716 ABCA13Q86UQ4 5058 aa6.04□□□□□ -1.44
ATG9A-215ENST00000446716 KRTAP9-2Q9BYQ4 174 aa6.01□□□□□ -1.45
ATG9A-215ENST00000446716 KRTAP19-3Q7Z4W3 81 aa6.01□□□□□ -1.45
ATG9A-215ENST00000446716 LPAP08519 4548 aa6□□□□□ -1.45
ATG9A-215ENST00000446716 SPRR5A0A1B0GTR4 108 aa5.94□□□□□ -1.46
ATG9A-215ENST00000446716 UBR4Q5T4S7 5183 aa5.92□□□□□ -1.46
ATG9A-215ENST00000446716 KRTAP19-6Q3LI70 58 aa5.88□□□□□ -1.47
ATG9A-215ENST00000446716 MT1LQ93083 61 aa5.88□□□□□ -1.47
ATG9A-215ENST00000446716 MT1EP04732 61 aa5.87□□□□□ -1.47
ATG9A-215ENST00000446716 LCE2DQ5TA82 110 aaPredicted RBP5.86□□□□□ -1.47
ATG9A-215ENST00000446716 MUC17Q685J3 4493 aa5.86□□□□□ -1.47
ATG9A-215ENST00000446716 SYNE1Q8NF91 8797 aaKnown RBP5.82□□□□□ -1.48
ATG9A-215ENST00000446716 KRTAP4-7Q9BYR0 210 aa5.81□□□□□ -1.48
ATG9A-215ENST00000446716 FSIP2Q5CZC0 6907 aa5.81□□□□□ -1.48
ATG9A-215ENST00000446716 LCE3DQ9BYE3 92 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms