RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 LINC00846Q9NV44 126 aa1.16□□□□□ -2.22
HMGB1P48-201ENST00000446155 PIGYQ3MUY2 71 aa1.15□□□□□ -2.23
HMGB1P48-201ENST00000446155 WFDC10BQ8IUB3 73 aa1.15□□□□□ -2.23
HMGB1P48-201ENST00000446155 TIMM8BQ9Y5J9 83 aaPredicted RBP1.15□□□□□ -2.23
HMGB1P48-201ENST00000446155 DEFB1P60022 68 aa1.14□□□□□ -2.23
HMGB1P48-201ENST00000446155 HMGN3Q15651 99 aa1.14□□□□□ -2.23
HMGB1P48-201ENST00000446155 LINC01556Q5JQF7 62 aa1.14□□□□□ -2.23
HMGB1P48-201ENST00000446155 C10orf113Q5VZT2 155 aa1.14□□□□□ -2.23
HMGB1P48-201ENST00000446155 NOP10Q9NPE3 64 aaKnown RBP1.14□□□□□ -2.23
HMGB1P48-201ENST00000446155 A0A087WVE0 104 aa1.13□□□□□ -2.23
HMGB1P48-201ENST00000446155 F8WEM9 126 aa1.13□□□□□ -2.23
HMGB1P48-201ENST00000446155 K7EIM0 57 aa1.13□□□□□ -2.23
HMGB1P48-201ENST00000446155 M0R2T5 61 aa1.13□□□□□ -2.23
HMGB1P48-201ENST00000446155 SPINK7P58062 85 aa1.13□□□□□ -2.23
HMGB1P48-201ENST00000446155 KRTAP19-6Q3LI70 58 aa1.13□□□□□ -2.23
HMGB1P48-201ENST00000446155 KRTAP2-1Q9BYU5 128 aa1.13□□□□□ -2.23
HMGB1P48-201ENST00000446155 CMC2Q9NRP2 79 aa1.13□□□□□ -2.23
HMGB1P48-201ENST00000446155 SPCS1Q9Y6A9 102 aa1.13□□□□□ -2.23
HMGB1P48-201ENST00000446155 A8MTW9 85 aa1.12□□□□□ -2.23
HMGB1P48-201ENST00000446155 ARMS2P0C7Q2 107 aa1.12□□□□□ -2.23
HMGB1P48-201ENST00000446155 HTN1P15515 57 aa1.12□□□□□ -2.23
HMGB1P48-201ENST00000446155 SNRPGP62308 76 aaKnown RBP1.12□□□□□ -2.23
HMGB1P48-201ENST00000446155 TMEM167AQ8TBQ9 72 aa1.12□□□□□ -2.23
HMGB1P48-201ENST00000446155 TTTY10Q9BZA0 68 aa1.12□□□□□ -2.23
HMGB1P48-201ENST00000446155 PLAC8Q9NZF1 115 aa1.12□□□□□ -2.23
HMGB1P48-201ENST00000446155 ABRACLQ9P1F3 81 aa1.12□□□□□ -2.23
HMGB1P48-201ENST00000446155 ADIRFQ15847 76 aa1.11□□□□□ -2.23
HMGB1P48-201ENST00000446155 ST20Q9HBF5 79 aa1.11□□□□□ -2.23
HMGB1P48-201ENST00000446155 PSENENQ9NZ42 101 aa1.11□□□□□ -2.23
HMGB1P48-201ENST00000446155 PRO0255Q9UI72 69 aa1.11□□□□□ -2.23
HMGB1P48-201ENST00000446155 KANTRA0A1W2PQU2 76 aa1.1□□□□□ -2.23
HMGB1P48-201ENST00000446155 I3L2K1 104 aa1.1□□□□□ -2.23
HMGB1P48-201ENST00000446155 WT1-ASQ06250 92 aa1.1□□□□□ -2.23
HMGB1P48-201ENST00000446155 NMSQ5H8A3 153 aa1.1□□□□□ -2.23
HMGB1P48-201ENST00000446155 ALKAL2Q6UX46 152 aa1.1□□□□□ -2.23
HMGB1P48-201ENST00000446155 TRBV6-1A0A0K0K1D8 114 aa1.09□□□□□ -2.23
HMGB1P48-201ENST00000446155 D6R8Y8 96 aa1.09□□□□□ -2.23
HMGB1P48-201ENST00000446155 LEPROTL1O95214 131 aa1.09□□□□□ -2.23
HMGB1P48-201ENST00000446155 ACYP1P07311 99 aa1.09□□□□□ -2.23
HMGB1P48-201ENST00000446155 PRCDQ00LT1 54 aa1.09□□□□□ -2.23
HMGB1P48-201ENST00000446155 COX6A2Q02221 97 aa1.09□□□□□ -2.23
HMGB1P48-201ENST00000446155 LINC00643Q86TS7 51 aa1.09□□□□□ -2.23
HMGB1P48-201ENST00000446155 MUSTN1Q8IVN3 82 aa1.09□□□□□ -2.23
HMGB1P48-201ENST00000446155 H0Y9P7 68 aa1.07□□□□□ -2.24
HMGB1P48-201ENST00000446155 SPINK4O60575 86 aa1.07□□□□□ -2.24
HMGB1P48-201ENST00000446155 SPATA8Q6RVD6 105 aa1.07□□□□□ -2.24
HMGB1P48-201ENST00000446155 C6orf201Q7Z4U5 140 aa1.07□□□□□ -2.24
HMGB1P48-201ENST00000446155 DEFB107AQ8IZN7 70 aa1.07□□□□□ -2.24
HMGB1P48-201ENST00000446155 MYMXA0A1B0GTQ4 84 aa1.05□□□□□ -2.24
HMGB1P48-201ENST00000446155 SFTA3P0C7M3 94 aa1.05□□□□□ -2.24
HMGB1P48-201ENST00000446155 GNGT1P63211 74 aa1.05□□□□□ -2.24
HMGB1P48-201ENST00000446155 CNFNQ9BYD5 112 aa1.05□□□□□ -2.24
HMGB1P48-201ENST00000446155 HMCN1Q96RW7 5635 aa1.05□□□□□ -2.24
HMGB1P48-201ENST00000446155 MT2AP02795 61 aa1.04□□□□□ -2.24
HMGB1P48-201ENST00000446155 MT1FP04733 61 aa1.04□□□□□ -2.24
HMGB1P48-201ENST00000446155 ENHOQ6UWT2 76 aa1.04□□□□□ -2.24
HMGB1P48-201ENST00000446155 COX6B2Q6YFQ2 88 aa1.04□□□□□ -2.24
HMGB1P48-201ENST00000446155 UBE2D4Q9Y2X8 147 aa1.04□□□□□ -2.24
HMGB1P48-201ENST00000446155 AHNAK2Q8IVF2 5795 aa1.04□□□□□ -2.24
HMGB1P48-201ENST00000446155 A0A096LNI7 61 aa1.03□□□□□ -2.24
HMGB1P48-201ENST00000446155 BVES-AS1Q5T3Y7 98 aa1.03□□□□□ -2.24
HMGB1P48-201ENST00000446155 KRTAP5-10Q6L8G5 202 aa1.03□□□□□ -2.24
HMGB1P48-201ENST00000446155 ARHGAP5-AS1Q96IT6 56 aa1.03□□□□□ -2.24
HMGB1P48-201ENST00000446155 A0A087WWC5 75 aa1.02□□□□□ -2.25
HMGB1P48-201ENST00000446155 CEBPZOSA8MTT3 80 aa1.02□□□□□ -2.25
HMGB1P48-201ENST00000446155 H3BUT2 72 aa1.02□□□□□ -2.25
HMGB1P48-201ENST00000446155 SPRR2EP22531 72 aa1.02□□□□□ -2.25
HMGB1P48-201ENST00000446155 SPRR2BP35325 72 aa1.02□□□□□ -2.25
HMGB1P48-201ENST00000446155 SPRR2AP35326 72 aa1.02□□□□□ -2.25
HMGB1P48-201ENST00000446155 TP53AIP1Q9HCN2 124 aa1.02□□□□□ -2.25
HMGB1P48-201ENST00000446155 A0A1B0GU69 56 aa1.01□□□□□ -2.25
HMGB1P48-201ENST00000446155 IGLC2P0DOY2 106 aa1.01□□□□□ -2.25
HMGB1P48-201ENST00000446155 IGLC3P0DOY3 106 aa1.01□□□□□ -2.25
HMGB1P48-201ENST00000446155 DSTQ03001 7570 aaKnown RBP1.01□□□□□ -2.25
HMGB1P48-201ENST00000446155 TRBV7-4A0A0J9YYF1 115 aa1□□□□□ -2.25
HMGB1P48-201ENST00000446155 LINC00959A0A1B0GUT2 108 aa1□□□□□ -2.25
HMGB1P48-201ENST00000446155 SNRPGP15A8MWD9 76 aa1□□□□□ -2.25
HMGB1P48-201ENST00000446155 A0A1B0GUT8 65 aa0.99□□□□□ -2.25
HMGB1P48-201ENST00000446155 SPRR2DP22532 72 aa0.99□□□□□ -2.25
HMGB1P48-201ENST00000446155 KRTAP19-3Q7Z4W3 81 aa0.98□□□□□ -2.25
HMGB1P48-201ENST00000446155 SMCO4Q9NRQ5 59 aa0.98□□□□□ -2.25
HMGB1P48-201ENST00000446155 CFDP00746 253 aaPredicted RBP0.97□□□□□ -2.25
HMGB1P48-201ENST00000446155 CLPSL2Q6UWE3 100 aa0.97□□□□□ -2.25
HMGB1P48-201ENST00000446155 C18orf32Q8TCD1 76 aa0.97□□□□□ -2.25
HMGB1P48-201ENST00000446155 SPRR2FQ96RM1 72 aa0.97□□□□□ -2.25
HMGB1P48-201ENST00000446155 AHNAKQ09666 5890 aaKnown RBP0.97□□□□□ -2.25
HMGB1P48-201ENST00000446155 PDCD5O14737 125 aa0.96□□□□□ -2.26
HMGB1P48-201ENST00000446155 ATP5EP2Q5VTU8 51 aa0.95□□□□□ -2.26
HMGB1P48-201ENST00000446155 Q8IZM0 81 aa0.95□□□□□ -2.26
HMGB1P48-201ENST00000446155 FXYD6Q9H0Q3 95 aa0.94□□□□□ -2.26
HMGB1P48-201ENST00000446155 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
HMGB1P48-201ENST00000446155 SPINK1P00995 79 aa0.93□□□□□ -2.26
HMGB1P48-201ENST00000446155 SMIM13P0DJ93 91 aa0.93□□□□□ -2.26
HMGB1P48-201ENST00000446155 IAPPP10997 89 aa0.93□□□□□ -2.26
HMGB1P48-201ENST00000446155 MUC5BQ9HC84 5762 aaPredicted RBP0.93□□□□□ -2.26
HMGB1P48-201ENST00000446155 C9orf92A6NGG3 77 aa0.92□□□□□ -2.26
HMGB1P48-201ENST00000446155 NDUFB1O75438 58 aa0.92□□□□□ -2.26
HMGB1P48-201ENST00000446155 A0A087WXM4 84 aa0.91□□□□□ -2.26
HMGB1P48-201ENST00000446155 FXYD6-FXYD2A0A087WZ82 144 aa0.91□□□□□ -2.26
HMGB1P48-201ENST00000446155 TRAV21A0A0B4J279 112 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms