RNA–Protein interactions for RNA: ENST00000440664.5

LINC01549-201, Transcript of long intergenic non-protein coding RNA 1549, humanhuman

TSL 3 BASIC

Gene LINC01549, Length 714 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549-201ENST00000440664 GNG4P50150 75 aa0.32□□□□□ -2.36
LINC01549-201ENST00000440664 COX17Q14061 63 aa0.32□□□□□ -2.36
LINC01549-201ENST00000440664 DEFB107AQ8IZN7 70 aa0.32□□□□□ -2.36
LINC01549-201ENST00000440664 Q8N8P6 123 aa0.32□□□□□ -2.36
LINC01549-201ENST00000440664 RPL39LQ96EH5 51 aaKnown RBP0.32□□□□□ -2.36
LINC01549-201ENST00000440664 MGST2Q99735 147 aa0.32□□□□□ -2.36
LINC01549-201ENST00000440664 SPRR2GQ9BYE4 73 aa0.32□□□□□ -2.36
LINC01549-201ENST00000440664 TOMM7Q9P0U1 55 aa0.32□□□□□ -2.36
LINC01549-201ENST00000440664 UQCR10Q9UDW1 63 aa0.32□□□□□ -2.36
LINC01549-201ENST00000440664 LENEPQ9Y5L5 61 aa0.32□□□□□ -2.36
LINC01549-201ENST00000440664 TRAV22A0A0B4J277 110 aa0.31□□□□□ -2.36
LINC01549-201ENST00000440664 NDUFA1O15239 70 aa0.31□□□□□ -2.36
LINC01549-201ENST00000440664 DLEU1O43261 78 aa0.31□□□□□ -2.36
LINC01549-201ENST00000440664 IFITM1P13164 125 aa0.31□□□□□ -2.36
LINC01549-201ENST00000440664 MT1GP13640 62 aa0.31□□□□□ -2.36
LINC01549-201ENST00000440664 CRIP1P50238 77 aa0.31□□□□□ -2.36
LINC01549-201ENST00000440664 WHAMMP3Q1A5X7 153 aa0.31□□□□□ -2.36
LINC01549-201ENST00000440664 TMEM170BQ5T4T1 132 aa0.31□□□□□ -2.36
LINC01549-201ENST00000440664 C10orf113Q5VZT2 155 aa0.31□□□□□ -2.36
LINC01549-201ENST00000440664 GTF2H5Q6ZYL4 71 aa0.31□□□□□ -2.36
LINC01549-201ENST00000440664 SSBP3-AS1Q7Z2R9 100 aa0.31□□□□□ -2.36
LINC01549-201ENST00000440664 FAM167A-AS1Q96KT0 104 aa0.31□□□□□ -2.36
LINC01549-201ENST00000440664 SPANXDQ9BXN6 97 aa0.31□□□□□ -2.36
LINC01549-201ENST00000440664 NMES1Q9C002 83 aa0.31□□□□□ -2.36
LINC01549-201ENST00000440664 UBE2L5PA0A1B0GUS4 154 aa0.3□□□□□ -2.36
LINC01549-201ENST00000440664 LOC100130705A0A1B0GUX0 176 aa0.3□□□□□ -2.36
LINC01549-201ENST00000440664 ZNF815PA8K554 130 aa0.3□□□□□ -2.36
LINC01549-201ENST00000440664 M0QY20 66 aa0.3□□□□□ -2.36
LINC01549-201ENST00000440664 SSSCA1O60232 199 aa0.3□□□□□ -2.36
LINC01549-201ENST00000440664 CFDP00746 253 aaPredicted RBP0.3□□□□□ -2.36
LINC01549-201ENST00000440664 ATP5EP56381 51 aaPredicted RBP0.3□□□□□ -2.36
LINC01549-201ENST00000440664 UBE2L3P68036 154 aaKnown RBP0.3□□□□□ -2.36
LINC01549-201ENST00000440664 KRTAP21-1Q3LI58 79 aa0.3□□□□□ -2.36
LINC01549-201ENST00000440664 KRTAP6-2Q3LI66 62 aa0.3□□□□□ -2.36
LINC01549-201ENST00000440664 WFDC13Q8IUB5 93 aa0.3□□□□□ -2.36
LINC01549-201ENST00000440664 CYP4F30PQ9H0H9 118 aa0.3□□□□□ -2.36
LINC01549-201ENST00000440664 MANBALQ9NQG1 85 aa0.3□□□□□ -2.36
LINC01549-201ENST00000440664 F8VRH5 84 aa0.29□□□□□ -2.36
LINC01549-201ENST00000440664 UQCR11O14957 56 aa0.29□□□□□ -2.36
LINC01549-201ENST00000440664 SPINK8P0C7L1 97 aa0.29□□□□□ -2.36
LINC01549-201ENST00000440664 RPL39P62891 51 aaKnown RBP0.29□□□□□ -2.36
LINC01549-201ENST00000440664 KRTAP19-5Q3LI72 72 aa0.29□□□□□ -2.36
LINC01549-201ENST00000440664 BAGE2Q86Y30 109 aa0.29□□□□□ -2.36
LINC01549-201ENST00000440664 CDC42SE2Q9NRR3 84 aa0.29□□□□□ -2.36
LINC01549-201ENST00000440664 PSENENQ9NZ42 101 aa0.29□□□□□ -2.36
LINC01549-201ENST00000440664 SPCS1Q9Y6A9 102 aa0.29□□□□□ -2.36
LINC01549-201ENST00000440664 NAP1L6A6NFF2 107 aa0.28□□□□□ -2.36
LINC01549-201ENST00000440664 D6R8Y8 96 aa0.28□□□□□ -2.36
LINC01549-201ENST00000440664 CHKB-CPT1BH3BT56 60 aa0.28□□□□□ -2.36
LINC01549-201ENST00000440664 PKIAP61925 76 aa0.28□□□□□ -2.36
LINC01549-201ENST00000440664 RPS29P62273 56 aaKnown RBP0.28□□□□□ -2.36
LINC01549-201ENST00000440664 KRTAP6-1Q3LI64 71 aa0.28□□□□□ -2.36
LINC01549-201ENST00000440664 Q5BKY6 102 aa0.28□□□□□ -2.36
LINC01549-201ENST00000440664 DEFB105AQ8NG35 78 aa0.28□□□□□ -2.36
LINC01549-201ENST00000440664 MT1LQ93083 61 aa0.28□□□□□ -2.36
LINC01549-201ENST00000440664 C2orf88Q9BSF0 95 aa0.28□□□□□ -2.36
LINC01549-201ENST00000440664 ARL2-SNX15V9GYD0 113 aa0.28□□□□□ -2.36
LINC01549-201ENST00000440664 A0A087WXM4 84 aa0.27□□□□□ -2.37
LINC01549-201ENST00000440664 ETDCA0A1B0GVM5 59 aa0.27□□□□□ -2.37
LINC01549-201ENST00000440664 LINC00587B1AMM8 73 aa0.27□□□□□ -2.37
LINC01549-201ENST00000440664 SFT2D2O95562 160 aa0.27□□□□□ -2.37
LINC01549-201ENST00000440664 COX6CP09669 75 aa0.27□□□□□ -2.37
LINC01549-201ENST00000440664 KRTDAPP60985 99 aa0.27□□□□□ -2.37
LINC01549-201ENST00000440664 Q6JHZ5 121 aa0.27□□□□□ -2.37
LINC01549-201ENST00000440664 C12orf57Q99622 126 aa0.27□□□□□ -2.37
LINC01549-201ENST00000440664 TCEAL7Q9BRU2 100 aa0.27□□□□□ -2.37
LINC01549-201ENST00000440664 H1FX-AS1Q4G0G2 97 aa0.26□□□□□ -2.37
LINC01549-201ENST00000440664 SFTA2Q6UW10 78 aa0.26□□□□□ -2.37
LINC01549-201ENST00000440664 CNFNQ9BYD5 112 aa0.26□□□□□ -2.37
LINC01549-201ENST00000440664 NXT2Q9NPJ8 142 aaKnown RBP0.26□□□□□ -2.37
LINC01549-201ENST00000440664 AP4S1Q9Y587 144 aa0.26□□□□□ -2.37
LINC01549-201ENST00000440664 A0A087WVE0 104 aa0.25□□□□□ -2.37
LINC01549-201ENST00000440664 C7orf77A4D0Y5 90 aa0.25□□□□□ -2.37
LINC01549-201ENST00000440664 PDCD5O14737 125 aa0.25□□□□□ -2.37
LINC01549-201ENST00000440664 Q8IZM0 81 aa0.25□□□□□ -2.37
LINC01549-201ENST00000440664 AMELXQ99217 191 aa0.25□□□□□ -2.37
LINC01549-201ENST00000440664 VAMP8Q9BV40 100 aa0.25□□□□□ -2.37
LINC01549-201ENST00000440664 TP53AIP1Q9HCN2 124 aa0.25□□□□□ -2.37
LINC01549-201ENST00000440664 I3L3M4 83 aa0.24□□□□□ -2.37
LINC01549-201ENST00000440664 S100PP25815 95 aa0.24□□□□□ -2.37
LINC01549-201ENST00000440664 FCER1GP30273 86 aa0.24□□□□□ -2.37
LINC01549-201ENST00000440664 SPRR1AP35321 89 aa0.24□□□□□ -2.37
LINC01549-201ENST00000440664 PRO1933Q9H354 126 aa0.24□□□□□ -2.37
LINC01549-201ENST00000440664 CDKN2A-AS1Q9UH64 79 aa0.24□□□□□ -2.37
LINC01549-201ENST00000440664 PRO1854Q9UHT4 67 aa0.24□□□□□ -2.37
LINC01549-201ENST00000440664 LINC01558Q9Y6Z2 57 aa0.24□□□□□ -2.37
LINC01549-201ENST00000440664 TMEM218A2RU14 115 aa0.23□□□□□ -2.37
LINC01549-201ENST00000440664 POLR2KP53803 58 aaKnown RBP0.23□□□□□ -2.37
LINC01549-201ENST00000440664 SEC11AP67812 179 aa0.23□□□□□ -2.37
LINC01549-201ENST00000440664 HSD52Q0P140 79 aa0.23□□□□□ -2.37
LINC01549-201ENST00000440664 S100A16Q96FQ6 103 aaKnown RBP0.23□□□□□ -2.37
LINC01549-201ENST00000440664 KCNQ1DNQ9H478 68 aa0.23□□□□□ -2.37
LINC01549-201ENST00000440664 ST20Q9HBF5 79 aa0.23□□□□□ -2.37
LINC01549-201ENST00000440664 F8WEM9 126 aa0.22□□□□□ -2.37
LINC01549-201ENST00000440664 SYS1-DBNDD2H3BUS1 97 aa0.22□□□□□ -2.37
LINC01549-201ENST00000440664 H3BUT2 72 aa0.22□□□□□ -2.37
LINC01549-201ENST00000440664 SMIM13P0DJ93 91 aa0.22□□□□□ -2.37
LINC01549-201ENST00000440664 SPRR1BP22528 89 aa0.22□□□□□ -2.37
LINC01549-201ENST00000440664 LINC00158P58513 81 aa0.22□□□□□ -2.37
LINC01549-201ENST00000440664 PMCHL2Q9BQD1 86 aa0.22□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms