RNA–Protein interactions for RNA: ENST00000438547.6

SEMA4D-211, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-211ENST00000438547 LORP23490 312 aaPredicted RBP4.86□□□□□ -1.63
SEMA4D-211ENST00000438547 DNAH1Q9P2D7 4330 aa4.86□□□□□ -1.63
SEMA4D-211ENST00000438547 KRTAP10-12P60413 245 aa4.86□□□□□ -1.63
SEMA4D-211ENST00000438547 KRTAP23-1A1A580 65 aa4.84□□□□□ -1.63
SEMA4D-211ENST00000438547 DNAH11Q96DT5 4516 aa4.83□□□□□ -1.64
SEMA4D-211ENST00000438547 DNAH5Q8TE73 4624 aa4.83□□□□□ -1.64
SEMA4D-211ENST00000438547 KRTAP12-3P60328 96 aa4.79□□□□□ -1.64
SEMA4D-211ENST00000438547 LCE3AQ5TA76 89 aa4.76□□□□□ -1.65
SEMA4D-211ENST00000438547 VPS13DQ5THJ4 4388 aa4.73□□□□□ -1.65
SEMA4D-211ENST00000438547 DNAH17Q9UFH2 4485 aa4.72□□□□□ -1.65
SEMA4D-211ENST00000438547 STARD9Q9P2P6 4700 aa4.72□□□□□ -1.65
SEMA4D-211ENST00000438547 DNAH8Q96JB1 4490 aa4.7□□□□□ -1.66
SEMA4D-211ENST00000438547 ALMS1Q8TCU4 4167 aa4.7□□□□□ -1.66
SEMA4D-211ENST00000438547 DNHD1Q96M86 4753 aa4.66□□□□□ -1.66
SEMA4D-211ENST00000438547 ANK2Q01484 3957 aa4.66□□□□□ -1.66
SEMA4D-211ENST00000438547 LRP1BQ9NZR2 4599 aa4.66□□□□□ -1.66
SEMA4D-211ENST00000438547 FAT1Q14517 4588 aa4.64□□□□□ -1.67
SEMA4D-211ENST00000438547 DNAH2Q9P225 4427 aa4.64□□□□□ -1.67
SEMA4D-211ENST00000438547 CRCT1Q9UGL9 99 aa4.62□□□□□ -1.67
SEMA4D-211ENST00000438547 KMT2AQ03164 3969 aa4.61□□□□□ -1.67
SEMA4D-211ENST00000438547 PRKDCP78527 4128 aaKnown RBP4.6□□□□□ -1.67
SEMA4D-211ENST00000438547 KRTAP4-1Q9BYQ7 146 aa4.6□□□□□ -1.67
SEMA4D-211ENST00000438547 DNAH3Q8TD57 4116 aa4.6□□□□□ -1.67
SEMA4D-211ENST00000438547 DYNC1H1Q14204 4646 aaKnown RBP4.58□□□□□ -1.68
SEMA4D-211ENST00000438547 LYSTQ99698 3801 aa4.57□□□□□ -1.68
SEMA4D-211ENST00000438547 FRAS1Q86XX4 4008 aa4.55□□□□□ -1.68
SEMA4D-211ENST00000438547 VPS13BQ7Z7G8 4022 aa4.5□□□□□ -1.69
SEMA4D-211ENST00000438547 MYCBP2O75592 4640 aa4.48□□□□□ -1.69
SEMA4D-211ENST00000438547 SACSQ9NZJ4 4579 aa4.48□□□□□ -1.69
SEMA4D-211ENST00000438547 DYNC2H1Q8NCM8 4307 aaKnown RBP4.47□□□□□ -1.69
SEMA4D-211ENST00000438547 CMYA5Q8N3K9 4069 aa4.47□□□□□ -1.69
SEMA4D-211ENST00000438547 RYR1P21817 5038 aa4.46□□□□□ -1.7
SEMA4D-211ENST00000438547 SPRR2GQ9BYE4 73 aa4.45□□□□□ -1.7
SEMA4D-211ENST00000438547 DNAH7Q8WXX0 4024 aa4.45□□□□□ -1.7
SEMA4D-211ENST00000438547 DNAH6Q9C0G6 4158 aa4.44□□□□□ -1.7
SEMA4D-211ENST00000438547 HECTD4Q9Y4D8 3996 aa4.43□□□□□ -1.7
SEMA4D-211ENST00000438547 MT1HP80294 61 aa4.41□□□□□ -1.7
SEMA4D-211ENST00000438547 MT2AP02795 61 aa4.41□□□□□ -1.7
SEMA4D-211ENST00000438547 APOBP04114 4563 aaKnown RBP4.4□□□□□ -1.71
SEMA4D-211ENST00000438547 FAT2Q9NYQ8 4349 aa4.4□□□□□ -1.71
SEMA4D-211ENST00000438547 KRTAP10-5P60370 271 aa4.38□□□□□ -1.71
SEMA4D-211ENST00000438547 KRTAP8-1Q8IUC2 63 aa4.36□□□□□ -1.71
SEMA4D-211ENST00000438547 MT1FP04733 61 aa4.33□□□□□ -1.72
SEMA4D-211ENST00000438547 LRP1Q07954 4544 aaKnown RBP4.33□□□□□ -1.72
SEMA4D-211ENST00000438547 KIAA1109Q2LD37 5005 aa4.3□□□□□ -1.72
SEMA4D-211ENST00000438547 FAT3Q8TDW7 4589 aa4.28□□□□□ -1.72
SEMA4D-211ENST00000438547 KRTAP19-5Q3LI72 72 aa4.25□□□□□ -1.73
SEMA4D-211ENST00000438547 HYDINQ4G0P3 5121 aa4.24□□□□□ -1.73
SEMA4D-211ENST00000438547 PKHD1P08F94 4074 aa4.22□□□□□ -1.73
SEMA4D-211ENST00000438547 LCE3CQ5T5A8 94 aa4.22□□□□□ -1.73
SEMA4D-211ENST00000438547 RYR3Q15413 4870 aa4.21□□□□□ -1.74
SEMA4D-211ENST00000438547 KRTAP19-1Q8IUB9 90 aa4.2□□□□□ -1.74
SEMA4D-211ENST00000438547 KRTAP17-1Q9BYP8 105 aa4.2□□□□□ -1.74
SEMA4D-211ENST00000438547 LCE2DQ5TA82 110 aaPredicted RBP4.19□□□□□ -1.74
SEMA4D-211ENST00000438547 LRP2P98164 4655 aa4.15□□□□□ -1.75
SEMA4D-211ENST00000438547 KRTAP19-8Q3LI54 63 aa4.14□□□□□ -1.75
SEMA4D-211ENST00000438547 KRTAP10-7P60409 375 aaPredicted RBP4.11□□□□□ -1.75
SEMA4D-211ENST00000438547 RYR2Q92736 4967 aa4.1□□□□□ -1.75
SEMA4D-211ENST00000438547 KRTAP19-4Q3LI73 84 aa4.09□□□□□ -1.75
SEMA4D-211ENST00000438547 PKD1P98161 4303 aa4.06□□□□□ -1.76
SEMA4D-211ENST00000438547 SPRR5A0A1B0GTR4 108 aa4.06□□□□□ -1.76
SEMA4D-211ENST00000438547 MT1XP80297 61 aa4.05□□□□□ -1.76
SEMA4D-211ENST00000438547 SPRR2FQ96RM1 72 aa4.03□□□□□ -1.76
SEMA4D-211ENST00000438547 KMT2CQ8NEZ4 4911 aaKnown RBP4.02□□□□□ -1.77
SEMA4D-211ENST00000438547 MT1BP07438 61 aa4.01□□□□□ -1.77
SEMA4D-211ENST00000438547 HSPG2P98160 4391 aa4.01□□□□□ -1.77
SEMA4D-211ENST00000438547 KRTAP9-8Q9BYQ0 159 aa3.97□□□□□ -1.77
SEMA4D-211ENST00000438547 LPAP08519 4548 aa3.96□□□□□ -1.78
SEMA4D-211ENST00000438547 HERC2O95714 4834 aa3.95□□□□□ -1.78
SEMA4D-211ENST00000438547 LCE2CQ5TA81 110 aa3.93□□□□□ -1.78
SEMA4D-211ENST00000438547 PKHD1L1Q86WI1 4243 aa3.92□□□□□ -1.78
SEMA4D-211ENST00000438547 TNXBP22105 4242 aa3.89□□□□□ -1.79
SEMA4D-211ENST00000438547 KRTAP4-8A0A0G2JLE6 195 aa3.88□□□□□ -1.79
SEMA4D-211ENST00000438547 KRTAP4-8Q9BYQ9 185 aa3.88□□□□□ -1.79
SEMA4D-211ENST00000438547 LCE2BO14633 110 aa3.86□□□□□ -1.79
SEMA4D-211ENST00000438547 KRTAP9-3Q9BYQ3 159 aa3.86□□□□□ -1.79
SEMA4D-211ENST00000438547 KRTAP12-4P60329 112 aa3.85□□□□□ -1.79
SEMA4D-211ENST00000438547 MT1GP13640 62 aa3.83□□□□□ -1.8
SEMA4D-211ENST00000438547 LCE3BQ5TA77 95 aa3.83□□□□□ -1.8
SEMA4D-211ENST00000438547 PCLOQ9Y6V0 5065 aa3.82□□□□□ -1.8
SEMA4D-211ENST00000438547 KRTAP19-2Q3LHN2 52 aa3.8□□□□□ -1.8
SEMA4D-211ENST00000438547 HERC1Q15751 4861 aa3.8□□□□□ -1.8
SEMA4D-211ENST00000438547 MUC17Q685J3 4493 aa3.77□□□□□ -1.81
SEMA4D-211ENST00000438547 BIRC6Q9NR09 4857 aa3.73□□□□□ -1.81
SEMA4D-211ENST00000438547 EPPK1P58107 5090 aaKnown RBP3.71□□□□□ -1.82
SEMA4D-211ENST00000438547 KRTAP4-7Q9BYR0 210 aa3.7□□□□□ -1.82
SEMA4D-211ENST00000438547 SPRR2EP22531 72 aa3.69□□□□□ -1.82
SEMA4D-211ENST00000438547 SPRR2BP35325 72 aa3.69□□□□□ -1.82
SEMA4D-211ENST00000438547 SPRR2AP35326 72 aa3.69□□□□□ -1.82
SEMA4D-211ENST00000438547 FLGP20930 4061 aaPredicted RBP3.69□□□□□ -1.82
SEMA4D-211ENST00000438547 ABCA13Q86UQ4 5058 aa3.69□□□□□ -1.82
SEMA4D-211ENST00000438547 LCE2AQ5TA79 106 aaPredicted RBP3.68□□□□□ -1.82
SEMA4D-211ENST00000438547 MT1LQ93083 61 aa3.67□□□□□ -1.82
SEMA4D-211ENST00000438547 LCE3DQ9BYE3 92 aa3.66□□□□□ -1.82
SEMA4D-211ENST00000438547 SYNE1Q8NF91 8797 aaKnown RBP3.65□□□□□ -1.83
SEMA4D-211ENST00000438547 MT1EP04732 61 aa3.63□□□□□ -1.83
SEMA4D-211ENST00000438547 KRTAP19-3Q7Z4W3 81 aa3.62□□□□□ -1.83
SEMA4D-211ENST00000438547 LCE3EQ5T5B0 92 aa3.61□□□□□ -1.83
SEMA4D-211ENST00000438547 MUC2Q02817 5179 aa3.57□□□□□ -1.84
SEMA4D-211ENST00000438547 SPRR2DP22532 72 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms