RNA–Protein interactions for RNA: ENST00000437974.5

ARHGEF28-204, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ARHGEF28, Length 5,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-204ENST00000437974 LORP23490 312 aaPredicted RBP7.8□□□□□ -1.16
ARHGEF28-204ENST00000437974 LCE3AQ5TA76 89 aa7.78□□□□□ -1.16
ARHGEF28-204ENST00000437974 CSMD3Q7Z407 3707 aa7.76□□□□□ -1.17
ARHGEF28-204ENST00000437974 KRTAP23-1A1A580 65 aa7.75□□□□□ -1.17
ARHGEF28-204ENST00000437974 KRTAP8-1Q8IUC2 63 aa7.71□□□□□ -1.18
ARHGEF28-204ENST00000437974 DNAH1Q9P2D7 4330 aa7.7□□□□□ -1.18
ARHGEF28-204ENST00000437974 DNAH5Q8TE73 4624 aa7.63□□□□□ -1.19
ARHGEF28-204ENST00000437974 ZNF469Q96JG9 3925 aaPredicted RBP7.61□□□□□ -1.19
ARHGEF28-204ENST00000437974 DNAH10Q8IVF4 4471 aa7.56□□□□□ -1.2
ARHGEF28-204ENST00000437974 PLECQ15149 4684 aaKnown RBP7.56□□□□□ -1.2
ARHGEF28-204ENST00000437974 DNAH17Q9UFH2 4485 aa7.47□□□□□ -1.21
ARHGEF28-204ENST00000437974 DNAH2Q9P225 4427 aa7.46□□□□□ -1.21
ARHGEF28-204ENST00000437974 KRTAP10-5P60370 271 aa7.46□□□□□ -1.21
ARHGEF28-204ENST00000437974 DNAH11Q96DT5 4516 aa7.45□□□□□ -1.22
ARHGEF28-204ENST00000437974 MT1HP80294 61 aa7.44□□□□□ -1.22
ARHGEF28-204ENST00000437974 VPS13DQ5THJ4 4388 aa7.43□□□□□ -1.22
ARHGEF28-204ENST00000437974 KRTAP4-1Q9BYQ7 146 aa7.42□□□□□ -1.22
ARHGEF28-204ENST00000437974 DNAH3Q8TD57 4116 aa7.36□□□□□ -1.23
ARHGEF28-204ENST00000437974 MT2AP02795 61 aa7.31□□□□□ -1.24
ARHGEF28-204ENST00000437974 DYNC1H1Q14204 4646 aaKnown RBP7.24□□□□□ -1.25
ARHGEF28-204ENST00000437974 LRP1BQ9NZR2 4599 aa7.23□□□□□ -1.25
ARHGEF28-204ENST00000437974 STARD9Q9P2P6 4700 aa7.2□□□□□ -1.26
ARHGEF28-204ENST00000437974 SPRR2GQ9BYE4 73 aa7.2□□□□□ -1.26
ARHGEF28-204ENST00000437974 DNAH8Q96JB1 4490 aa7.19□□□□□ -1.26
ARHGEF28-204ENST00000437974 SACSQ9NZJ4 4579 aa7.19□□□□□ -1.26
ARHGEF28-204ENST00000437974 FAT2Q9NYQ8 4349 aa7.18□□□□□ -1.26
ARHGEF28-204ENST00000437974 DYNC2H1Q8NCM8 4307 aaKnown RBP7.17□□□□□ -1.26
ARHGEF28-204ENST00000437974 SPRR2FQ96RM1 72 aa7.17□□□□□ -1.26
ARHGEF28-204ENST00000437974 ANK2Q01484 3957 aa7.13□□□□□ -1.27
ARHGEF28-204ENST00000437974 KRTAP10-7P60409 375 aaPredicted RBP7.13□□□□□ -1.27
ARHGEF28-204ENST00000437974 MT1FP04733 61 aa7.12□□□□□ -1.27
ARHGEF28-204ENST00000437974 FAT1Q14517 4588 aa7.11□□□□□ -1.27
ARHGEF28-204ENST00000437974 DNHD1Q96M86 4753 aa7.07□□□□□ -1.28
ARHGEF28-204ENST00000437974 KRTAP19-5Q3LI72 72 aa7.01□□□□□ -1.29
ARHGEF28-204ENST00000437974 KMT2AQ03164 3969 aa6.98□□□□□ -1.29
ARHGEF28-204ENST00000437974 VPS13BQ7Z7G8 4022 aa6.95□□□□□ -1.3
ARHGEF28-204ENST00000437974 APOBP04114 4563 aaKnown RBP6.94□□□□□ -1.3
ARHGEF28-204ENST00000437974 RYR1P21817 5038 aa6.92□□□□□ -1.3
ARHGEF28-204ENST00000437974 PRKDCP78527 4128 aaKnown RBP6.92□□□□□ -1.3
ARHGEF28-204ENST00000437974 FRAS1Q86XX4 4008 aa6.87□□□□□ -1.31
ARHGEF28-204ENST00000437974 LCE3CQ5T5A8 94 aa6.87□□□□□ -1.31
ARHGEF28-204ENST00000437974 CMYA5Q8N3K9 4069 aa6.84□□□□□ -1.31
ARHGEF28-204ENST00000437974 DNAH7Q8WXX0 4024 aa6.84□□□□□ -1.31
ARHGEF28-204ENST00000437974 DNAH6Q9C0G6 4158 aa6.84□□□□□ -1.31
ARHGEF28-204ENST00000437974 KRTAP19-4Q3LI73 84 aa6.81□□□□□ -1.32
ARHGEF28-204ENST00000437974 SPRR2EP22531 72 aa6.78□□□□□ -1.32
ARHGEF28-204ENST00000437974 SPRR2BP35325 72 aa6.78□□□□□ -1.32
ARHGEF28-204ENST00000437974 SPRR2AP35326 72 aa6.78□□□□□ -1.32
ARHGEF28-204ENST00000437974 LYSTQ99698 3801 aa6.74□□□□□ -1.33
ARHGEF28-204ENST00000437974 KRTAP17-1Q9BYP8 105 aa6.7□□□□□ -1.34
ARHGEF28-204ENST00000437974 RYR3Q15413 4870 aa6.67□□□□□ -1.34
ARHGEF28-204ENST00000437974 KRTAP19-8Q3LI54 63 aa6.67□□□□□ -1.34
ARHGEF28-204ENST00000437974 HECTD4Q9Y4D8 3996 aa6.67□□□□□ -1.34
ARHGEF28-204ENST00000437974 FAT3Q8TDW7 4589 aa6.65□□□□□ -1.35
ARHGEF28-204ENST00000437974 KRTAP19-1Q8IUB9 90 aa6.61□□□□□ -1.35
ARHGEF28-204ENST00000437974 MYCBP2O75592 4640 aa6.58□□□□□ -1.36
ARHGEF28-204ENST00000437974 SPRR2DP22532 72 aa6.57□□□□□ -1.36
ARHGEF28-204ENST00000437974 LCE2BO14633 110 aa6.5□□□□□ -1.37
ARHGEF28-204ENST00000437974 MT1XP80297 61 aa6.5□□□□□ -1.37
ARHGEF28-204ENST00000437974 LRP1Q07954 4544 aaKnown RBP6.49□□□□□ -1.37
ARHGEF28-204ENST00000437974 LCE3BQ5TA77 95 aa6.46□□□□□ -1.38
ARHGEF28-204ENST00000437974 RYR2Q92736 4967 aa6.44□□□□□ -1.38
ARHGEF28-204ENST00000437974 MT1BP07438 61 aa6.42□□□□□ -1.38
ARHGEF28-204ENST00000437974 KRTAP12-4P60329 112 aa6.42□□□□□ -1.38
ARHGEF28-204ENST00000437974 MT1GP13640 62 aa6.4□□□□□ -1.38
ARHGEF28-204ENST00000437974 KRTAP9-8Q9BYQ0 159 aa6.39□□□□□ -1.39
ARHGEF28-204ENST00000437974 KIAA1109Q2LD37 5005 aa6.34□□□□□ -1.39
ARHGEF28-204ENST00000437974 HSPG2P98160 4391 aa6.33□□□□□ -1.4
ARHGEF28-204ENST00000437974 HERC1Q15751 4861 aa6.33□□□□□ -1.4
ARHGEF28-204ENST00000437974 KRTAP9-3Q9BYQ3 159 aa6.28□□□□□ -1.4
ARHGEF28-204ENST00000437974 KRTAP4-8A0A0G2JLE6 195 aa6.28□□□□□ -1.4
ARHGEF28-204ENST00000437974 KRTAP4-8Q9BYQ9 185 aa6.28□□□□□ -1.4
ARHGEF28-204ENST00000437974 HYDINQ4G0P3 5121 aa6.26□□□□□ -1.41
ARHGEF28-204ENST00000437974 LCE2CQ5TA81 110 aa6.24□□□□□ -1.41
ARHGEF28-204ENST00000437974 SPRR5A0A1B0GTR4 108 aa6.2□□□□□ -1.42
ARHGEF28-204ENST00000437974 PKD1P98161 4303 aa6.19□□□□□ -1.42
ARHGEF28-204ENST00000437974 LPAP08519 4548 aa6.18□□□□□ -1.42
ARHGEF28-204ENST00000437974 PKHD1L1Q86WI1 4243 aa6.15□□□□□ -1.43
ARHGEF28-204ENST00000437974 LRP2P98164 4655 aa6.12□□□□□ -1.43
ARHGEF28-204ENST00000437974 PKHD1P08F94 4074 aa6.12□□□□□ -1.43
ARHGEF28-204ENST00000437974 LCE3DQ9BYE3 92 aa6.08□□□□□ -1.44
ARHGEF28-204ENST00000437974 TNXBP22105 4242 aa6.07□□□□□ -1.44
ARHGEF28-204ENST00000437974 HERC2O95714 4834 aa6.07□□□□□ -1.44
ARHGEF28-204ENST00000437974 KRTAP19-3Q7Z4W3 81 aa6.07□□□□□ -1.44
ARHGEF28-204ENST00000437974 BIRC6Q9NR09 4857 aa6.04□□□□□ -1.44
ARHGEF28-204ENST00000437974 LCE2DQ5TA82 110 aaPredicted RBP6.02□□□□□ -1.45
ARHGEF28-204ENST00000437974 LCE3EQ5T5B0 92 aa5.97□□□□□ -1.45
ARHGEF28-204ENST00000437974 KRTAP4-7Q9BYR0 210 aa5.96□□□□□ -1.46
ARHGEF28-204ENST00000437974 KRTAP19-2Q3LHN2 52 aa5.94□□□□□ -1.46
ARHGEF28-204ENST00000437974 PCLOQ9Y6V0 5065 aa5.93□□□□□ -1.46
ARHGEF28-204ENST00000437974 MT1LQ93083 61 aa5.92□□□□□ -1.46
ARHGEF28-204ENST00000437974 KMT2CQ8NEZ4 4911 aaKnown RBP5.91□□□□□ -1.46
ARHGEF28-204ENST00000437974 MT1EP04732 61 aa5.88□□□□□ -1.47
ARHGEF28-204ENST00000437974 FLGP20930 4061 aaPredicted RBP5.83□□□□□ -1.48
ARHGEF28-204ENST00000437974 KRTAP9-2Q9BYQ4 174 aa5.83□□□□□ -1.48
ARHGEF28-204ENST00000437974 MUC17Q685J3 4493 aa5.8□□□□□ -1.48
ARHGEF28-204ENST00000437974 MT4P47944 62 aa5.79□□□□□ -1.48
ARHGEF28-204ENST00000437974 KRTAP19-6Q3LI70 58 aa5.78□□□□□ -1.48
ARHGEF28-204ENST00000437974 MT3P25713 68 aa5.74□□□□□ -1.49
ARHGEF28-204ENST00000437974 MT1MQ8N339 61 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms