RNA–Protein interactions for RNA: ENST00000435706.6

TOP2B-204, Transcript of DNA topoisomerase II beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOP2B, Length 5,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-204ENST00000435706 CSMD3Q7Z407 3707 aa9.29□□□□□ -0.92
TOP2B-204ENST00000435706 ALMS1Q8TCU4 4167 aa9.19□□□□□ -0.94
TOP2B-204ENST00000435706 DNAH10Q8IVF4 4471 aa9.12□□□□□ -0.95
TOP2B-204ENST00000435706 DNAH5Q8TE73 4624 aa9.1□□□□□ -0.95
TOP2B-204ENST00000435706 DNAH1Q9P2D7 4330 aa9.09□□□□□ -0.95
TOP2B-204ENST00000435706 DNAH11Q96DT5 4516 aa9.07□□□□□ -0.96
TOP2B-204ENST00000435706 DNAH9Q9NYC9 4486 aa9.07□□□□□ -0.96
TOP2B-204ENST00000435706 KRTAP10-5P60370 271 aa9.01□□□□□ -0.97
TOP2B-204ENST00000435706 AKAP9Q99996 3911 aa9□□□□□ -0.97
TOP2B-204ENST00000435706 DNAH2Q9P225 4427 aa8.95□□□□□ -0.98
TOP2B-204ENST00000435706 KRTAP4-1Q9BYQ7 146 aa8.93□□□□□ -0.98
TOP2B-204ENST00000435706 PLECQ15149 4684 aaKnown RBP8.91□□□□□ -0.98
TOP2B-204ENST00000435706 DNAH17Q9UFH2 4485 aa8.9□□□□□ -0.98
TOP2B-204ENST00000435706 DNAH8Q96JB1 4490 aa8.77□□□□□ -1
TOP2B-204ENST00000435706 SPRR2GQ9BYE4 73 aa8.77□□□□□ -1.01
TOP2B-204ENST00000435706 ZNF469Q96JG9 3925 aaPredicted RBP8.76□□□□□ -1.01
TOP2B-204ENST00000435706 VPS13DQ5THJ4 4388 aa8.76□□□□□ -1.01
TOP2B-204ENST00000435706 FAT1Q14517 4588 aa8.73□□□□□ -1.01
TOP2B-204ENST00000435706 KRTAP8-1Q8IUC2 63 aa8.72□□□□□ -1.01
TOP2B-204ENST00000435706 MT2AP02795 61 aa8.63□□□□□ -1.03
TOP2B-204ENST00000435706 MT1HP80294 61 aa8.63□□□□□ -1.03
TOP2B-204ENST00000435706 SACSQ9NZJ4 4579 aa8.59□□□□□ -1.03
TOP2B-204ENST00000435706 DNAH3Q8TD57 4116 aa8.57□□□□□ -1.04
TOP2B-204ENST00000435706 DYNC1H1Q14204 4646 aaKnown RBP8.57□□□□□ -1.04
TOP2B-204ENST00000435706 LCE3CQ5T5A8 94 aa8.54□□□□□ -1.04
TOP2B-204ENST00000435706 KRTAP19-5Q3LI72 72 aa8.54□□□□□ -1.04
TOP2B-204ENST00000435706 LRP1BQ9NZR2 4599 aa8.52□□□□□ -1.05
TOP2B-204ENST00000435706 MT1FP04733 61 aa8.47□□□□□ -1.05
TOP2B-204ENST00000435706 DYNC2H1Q8NCM8 4307 aaKnown RBP8.42□□□□□ -1.06
TOP2B-204ENST00000435706 STARD9Q9P2P6 4700 aa8.42□□□□□ -1.06
TOP2B-204ENST00000435706 ANK2Q01484 3957 aa8.41□□□□□ -1.06
TOP2B-204ENST00000435706 APOBP04114 4563 aaKnown RBP8.34□□□□□ -1.07
TOP2B-204ENST00000435706 FAT2Q9NYQ8 4349 aa8.33□□□□□ -1.08
TOP2B-204ENST00000435706 RYR1P21817 5038 aa8.24□□□□□ -1.09
TOP2B-204ENST00000435706 SPRR5A0A1B0GTR4 108 aa8.22□□□□□ -1.09
TOP2B-204ENST00000435706 VPS13BQ7Z7G8 4022 aa8.2□□□□□ -1.1
TOP2B-204ENST00000435706 KRTAP19-4Q3LI73 84 aa8.2□□□□□ -1.1
TOP2B-204ENST00000435706 DNHD1Q96M86 4753 aa8.19□□□□□ -1.1
TOP2B-204ENST00000435706 KRTAP10-7P60409 375 aaPredicted RBP8.16□□□□□ -1.1
TOP2B-204ENST00000435706 KRTAP19-1Q8IUB9 90 aa8.15□□□□□ -1.1
TOP2B-204ENST00000435706 KRTAP19-8Q3LI54 63 aa8.09□□□□□ -1.11
TOP2B-204ENST00000435706 KMT2AQ03164 3969 aa8.06□□□□□ -1.12
TOP2B-204ENST00000435706 FRAS1Q86XX4 4008 aa8.05□□□□□ -1.12
TOP2B-204ENST00000435706 MYCBP2O75592 4640 aa8.04□□□□□ -1.12
TOP2B-204ENST00000435706 SPRR2FQ96RM1 72 aa8□□□□□ -1.13
TOP2B-204ENST00000435706 PRKDCP78527 4128 aaKnown RBP7.99□□□□□ -1.13
TOP2B-204ENST00000435706 MT1XP80297 61 aa7.98□□□□□ -1.13
TOP2B-204ENST00000435706 CMYA5Q8N3K9 4069 aa7.98□□□□□ -1.13
TOP2B-204ENST00000435706 DNAH6Q9C0G6 4158 aa7.91□□□□□ -1.14
TOP2B-204ENST00000435706 LYSTQ99698 3801 aa7.9□□□□□ -1.14
TOP2B-204ENST00000435706 KRTAP12-4P60329 112 aa7.9□□□□□ -1.15
TOP2B-204ENST00000435706 FAT3Q8TDW7 4589 aa7.88□□□□□ -1.15
TOP2B-204ENST00000435706 DNAH7Q8WXX0 4024 aa7.86□□□□□ -1.15
TOP2B-204ENST00000435706 RYR3Q15413 4870 aa7.83□□□□□ -1.16
TOP2B-204ENST00000435706 LRP1Q07954 4544 aaKnown RBP7.82□□□□□ -1.16
TOP2B-204ENST00000435706 MT1BP07438 61 aa7.82□□□□□ -1.16
TOP2B-204ENST00000435706 HECTD4Q9Y4D8 3996 aa7.81□□□□□ -1.16
TOP2B-204ENST00000435706 KRTAP17-1Q9BYP8 105 aa7.8□□□□□ -1.16
TOP2B-204ENST00000435706 LCE3BQ5TA77 95 aa7.8□□□□□ -1.16
TOP2B-204ENST00000435706 MT1GP13640 62 aa7.71□□□□□ -1.18
TOP2B-204ENST00000435706 KRTAP9-8Q9BYQ0 159 aa7.64□□□□□ -1.19
TOP2B-204ENST00000435706 RYR2Q92736 4967 aa7.63□□□□□ -1.19
TOP2B-204ENST00000435706 KIAA1109Q2LD37 5005 aa7.61□□□□□ -1.19
TOP2B-204ENST00000435706 KRTAP4-8A0A0G2JLE6 195 aa7.6□□□□□ -1.19
TOP2B-204ENST00000435706 KRTAP4-8Q9BYQ9 185 aa7.6□□□□□ -1.19
TOP2B-204ENST00000435706 LCE2CQ5TA81 110 aa7.48□□□□□ -1.21
TOP2B-204ENST00000435706 LCE3DQ9BYE3 92 aa7.46□□□□□ -1.22
TOP2B-204ENST00000435706 HSPG2P98160 4391 aa7.45□□□□□ -1.22
TOP2B-204ENST00000435706 KRTAP9-3Q9BYQ3 159 aa7.44□□□□□ -1.22
TOP2B-204ENST00000435706 LRP2P98164 4655 aa7.43□□□□□ -1.22
TOP2B-204ENST00000435706 HERC1Q15751 4861 aa7.41□□□□□ -1.22
TOP2B-204ENST00000435706 LCE3EQ5T5B0 92 aa7.38□□□□□ -1.23
TOP2B-204ENST00000435706 PKD1P98161 4303 aa7.37□□□□□ -1.23
TOP2B-204ENST00000435706 SPRR2EP22531 72 aa7.35□□□□□ -1.23
TOP2B-204ENST00000435706 SPRR2BP35325 72 aa7.35□□□□□ -1.23
TOP2B-204ENST00000435706 SPRR2AP35326 72 aa7.35□□□□□ -1.23
TOP2B-204ENST00000435706 KRTAP4-7Q9BYR0 210 aa7.35□□□□□ -1.23
TOP2B-204ENST00000435706 MT1LQ93083 61 aa7.26□□□□□ -1.25
TOP2B-204ENST00000435706 KRTAP19-2Q3LHN2 52 aa7.21□□□□□ -1.26
TOP2B-204ENST00000435706 HYDINQ4G0P3 5121 aa7.2□□□□□ -1.26
TOP2B-204ENST00000435706 LCE2BO14633 110 aa7.17□□□□□ -1.26
TOP2B-204ENST00000435706 HERC2O95714 4834 aa7.16□□□□□ -1.26
TOP2B-204ENST00000435706 LPAP08519 4548 aa7.16□□□□□ -1.26
TOP2B-204ENST00000435706 MT1EP04732 61 aa7.14□□□□□ -1.27
TOP2B-204ENST00000435706 KRTAP19-3Q7Z4W3 81 aa7.14□□□□□ -1.27
TOP2B-204ENST00000435706 PKHD1L1Q86WI1 4243 aa7.12□□□□□ -1.27
TOP2B-204ENST00000435706 SPRR2DP22532 72 aa7.1□□□□□ -1.27
TOP2B-204ENST00000435706 KMT2CQ8NEZ4 4911 aaKnown RBP7.09□□□□□ -1.27
TOP2B-204ENST00000435706 PKHD1P08F94 4074 aa7.07□□□□□ -1.28
TOP2B-204ENST00000435706 MUC17Q685J3 4493 aa7.06□□□□□ -1.28
TOP2B-204ENST00000435706 TNXBP22105 4242 aa7□□□□□ -1.29
TOP2B-204ENST00000435706 PRM1P04553 51 aa6.98□□□□□ -1.29
TOP2B-204ENST00000435706 FLGP20930 4061 aaPredicted RBP6.97□□□□□ -1.29
TOP2B-204ENST00000435706 PCLOQ9Y6V0 5065 aa6.96□□□□□ -1.3
TOP2B-204ENST00000435706 LOC100996750A0A140TA64 210 aa6.89□□□□□ -1.31
TOP2B-204ENST00000435706 MT1MQ8N339 61 aa6.89□□□□□ -1.31
TOP2B-204ENST00000435706 KRTAP2-3P0C7H8 128 aa6.77□□□□□ -1.33
TOP2B-204ENST00000435706 KRTAP2-4Q9BYR9 128 aa6.77□□□□□ -1.33
TOP2B-204ENST00000435706 KRTAP2-1Q9BYU5 128 aa6.77□□□□□ -1.33
TOP2B-204ENST00000435706 KRTAP4-3Q9BYR4 195 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms