RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 DNHD1Q96M86 4753 aa6.66□□□□□ -1.34
NEDD4-202ENST00000435532 CUBNO60494 3623 aa6.65□□□□□ -1.35
NEDD4-202ENST00000435532 MT1HP80294 61 aa6.64□□□□□ -1.35
NEDD4-202ENST00000435532 DNAH5Q8TE73 4624 aa6.63□□□□□ -1.35
NEDD4-202ENST00000435532 AKAP9Q99996 3911 aa6.62□□□□□ -1.35
NEDD4-202ENST00000435532 DNAH2Q9P225 4427 aa6.61□□□□□ -1.35
NEDD4-202ENST00000435532 LCE3AQ5TA76 89 aa6.55□□□□□ -1.36
NEDD4-202ENST00000435532 KRTAP4-1Q9BYQ7 146 aa6.54□□□□□ -1.36
NEDD4-202ENST00000435532 LORP23490 312 aaPredicted RBP6.53□□□□□ -1.36
NEDD4-202ENST00000435532 SVEP1Q4LDE5 3571 aa6.51□□□□□ -1.37
NEDD4-202ENST00000435532 VPS13DQ5THJ4 4388 aa6.48□□□□□ -1.37
NEDD4-202ENST00000435532 PLECQ15149 4684 aaKnown RBP6.46□□□□□ -1.37
NEDD4-202ENST00000435532 MT2AP02795 61 aa6.46□□□□□ -1.38
NEDD4-202ENST00000435532 DNAH17Q9UFH2 4485 aa6.43□□□□□ -1.38
NEDD4-202ENST00000435532 DYNC1H1Q14204 4646 aaKnown RBP6.43□□□□□ -1.38
NEDD4-202ENST00000435532 FAT2Q9NYQ8 4349 aa6.36□□□□□ -1.39
NEDD4-202ENST00000435532 SPRR2GQ9BYE4 73 aa6.35□□□□□ -1.39
NEDD4-202ENST00000435532 VPS13CQ709C8 3753 aa6.34□□□□□ -1.39
NEDD4-202ENST00000435532 INE1O15225 51 aa6.33□□□□□ -1.4
NEDD4-202ENST00000435532 DYNC2H1Q8NCM8 4307 aaKnown RBP6.31□□□□□ -1.4
NEDD4-202ENST00000435532 DNAH3Q8TD57 4116 aa6.29□□□□□ -1.4
NEDD4-202ENST00000435532 MT1FP04733 61 aa6.28□□□□□ -1.4
NEDD4-202ENST00000435532 LRP1BQ9NZR2 4599 aa6.28□□□□□ -1.4
NEDD4-202ENST00000435532 DNAH6Q9C0G6 4158 aa6.25□□□□□ -1.41
NEDD4-202ENST00000435532 ZNF469Q96JG9 3925 aaPredicted RBP6.21□□□□□ -1.42
NEDD4-202ENST00000435532 ANK2Q01484 3957 aa6.21□□□□□ -1.42
NEDD4-202ENST00000435532 SPRR2FQ96RM1 72 aa6.21□□□□□ -1.42
NEDD4-202ENST00000435532 SACSQ9NZJ4 4579 aa6.2□□□□□ -1.42
NEDD4-202ENST00000435532 STARD9Q9P2P6 4700 aa6.15□□□□□ -1.43
NEDD4-202ENST00000435532 KRTAP10-7P60409 375 aaPredicted RBP6.13□□□□□ -1.43
NEDD4-202ENST00000435532 DNAH8Q96JB1 4490 aa6.12□□□□□ -1.43
NEDD4-202ENST00000435532 BIRC6Q9NR09 4857 aa6.12□□□□□ -1.43
NEDD4-202ENST00000435532 RYR1P21817 5038 aa6.09□□□□□ -1.43
NEDD4-202ENST00000435532 KRTAP10-5P60370 271 aa6.09□□□□□ -1.44
NEDD4-202ENST00000435532 KRTAP19-4Q3LI73 84 aa6.03□□□□□ -1.44
NEDD4-202ENST00000435532 PRKDCP78527 4128 aaKnown RBP6.02□□□□□ -1.45
NEDD4-202ENST00000435532 FAT1Q14517 4588 aa6.01□□□□□ -1.45
NEDD4-202ENST00000435532 KIAA1109Q2LD37 5005 aa6□□□□□ -1.45
NEDD4-202ENST00000435532 HERC1Q15751 4861 aa5.99□□□□□ -1.45
NEDD4-202ENST00000435532 KRTAP19-5Q3LI72 72 aa5.99□□□□□ -1.45
NEDD4-202ENST00000435532 RYR3Q15413 4870 aa5.99□□□□□ -1.45
NEDD4-202ENST00000435532 KRTAP17-1Q9BYP8 105 aa5.98□□□□□ -1.45
NEDD4-202ENST00000435532 DNAH7Q8WXX0 4024 aa5.98□□□□□ -1.45
NEDD4-202ENST00000435532 SPRR2EP22531 72 aa5.96□□□□□ -1.46
NEDD4-202ENST00000435532 SPRR2BP35325 72 aa5.96□□□□□ -1.46
NEDD4-202ENST00000435532 SPRR2AP35326 72 aa5.96□□□□□ -1.46
NEDD4-202ENST00000435532 KRTAP19-8Q3LI54 63 aa5.95□□□□□ -1.46
NEDD4-202ENST00000435532 CSMD3Q7Z407 3707 aa5.93□□□□□ -1.46
NEDD4-202ENST00000435532 FAT3Q8TDW7 4589 aa5.92□□□□□ -1.46
NEDD4-202ENST00000435532 APOBP04114 4563 aaKnown RBP5.88□□□□□ -1.47
NEDD4-202ENST00000435532 RYR2Q92736 4967 aa5.88□□□□□ -1.47
NEDD4-202ENST00000435532 HSPG2P98160 4391 aa5.84□□□□□ -1.47
NEDD4-202ENST00000435532 CMYA5Q8N3K9 4069 aa5.84□□□□□ -1.47
NEDD4-202ENST00000435532 LCE3CQ5T5A8 94 aa5.83□□□□□ -1.48
NEDD4-202ENST00000435532 KMT2AQ03164 3969 aa5.8□□□□□ -1.48
NEDD4-202ENST00000435532 KRTAP19-1Q8IUB9 90 aa5.8□□□□□ -1.48
NEDD4-202ENST00000435532 HERC2O95714 4834 aa5.79□□□□□ -1.48
NEDD4-202ENST00000435532 SPRR2DP22532 72 aa5.79□□□□□ -1.48
NEDD4-202ENST00000435532 VPS13BQ7Z7G8 4022 aa5.78□□□□□ -1.48
NEDD4-202ENST00000435532 KRTAP9-8Q9BYQ0 159 aa5.75□□□□□ -1.49
NEDD4-202ENST00000435532 PKHD1L1Q86WI1 4243 aa5.75□□□□□ -1.49
NEDD4-202ENST00000435532 LRP1Q07954 4544 aaKnown RBP5.74□□□□□ -1.49
NEDD4-202ENST00000435532 LCE2BO14633 110 aa5.71□□□□□ -1.5
NEDD4-202ENST00000435532 MT1BP07438 61 aa5.68□□□□□ -1.5
NEDD4-202ENST00000435532 MT1XP80297 61 aa5.68□□□□□ -1.5
NEDD4-202ENST00000435532 KRTAP9-3Q9BYQ3 159 aa5.67□□□□□ -1.5
NEDD4-202ENST00000435532 LCE2CQ5TA81 110 aa5.66□□□□□ -1.5
NEDD4-202ENST00000435532 PCLOQ9Y6V0 5065 aa5.65□□□□□ -1.5
NEDD4-202ENST00000435532 FRAS1Q86XX4 4008 aa5.59□□□□□ -1.51
NEDD4-202ENST00000435532 MYCBP2O75592 4640 aa5.57□□□□□ -1.52
NEDD4-202ENST00000435532 KRTAP12-4P60329 112 aa5.55□□□□□ -1.52
NEDD4-202ENST00000435532 MT1GP13640 62 aa5.54□□□□□ -1.52
NEDD4-202ENST00000435532 PKD1P98161 4303 aa5.53□□□□□ -1.52
NEDD4-202ENST00000435532 LYSTQ99698 3801 aa5.51□□□□□ -1.53
NEDD4-202ENST00000435532 HECTD4Q9Y4D8 3996 aa5.49□□□□□ -1.53
NEDD4-202ENST00000435532 HYDINQ4G0P3 5121 aa5.49□□□□□ -1.53
NEDD4-202ENST00000435532 KRTAP9-2Q9BYQ4 174 aa5.45□□□□□ -1.54
NEDD4-202ENST00000435532 KRTAP4-8A0A0G2JLE6 195 aa5.39□□□□□ -1.55
NEDD4-202ENST00000435532 KRTAP4-8Q9BYQ9 185 aa5.39□□□□□ -1.55
NEDD4-202ENST00000435532 LCE2DQ5TA82 110 aaPredicted RBP5.38□□□□□ -1.55
NEDD4-202ENST00000435532 LCE3BQ5TA77 95 aa5.36□□□□□ -1.55
NEDD4-202ENST00000435532 ABCA13Q86UQ4 5058 aa5.35□□□□□ -1.55
NEDD4-202ENST00000435532 KRTAP19-2Q3LHN2 52 aa5.34□□□□□ -1.55
NEDD4-202ENST00000435532 KRTAP9-6A0A140TA67 174 aa5.34□□□□□ -1.55
NEDD4-202ENST00000435532 KRTAP19-3Q7Z4W3 81 aa5.33□□□□□ -1.56
NEDD4-202ENST00000435532 KRTAP19-6Q3LI70 58 aa5.32□□□□□ -1.56
NEDD4-202ENST00000435532 MUC17Q685J3 4493 aa5.32□□□□□ -1.56
NEDD4-202ENST00000435532 EPPK1P58107 5090 aaKnown RBP5.3□□□□□ -1.56
NEDD4-202ENST00000435532 KMT2CQ8NEZ4 4911 aaKnown RBP5.27□□□□□ -1.57
NEDD4-202ENST00000435532 PKHD1P08F94 4074 aa5.21□□□□□ -1.58
NEDD4-202ENST00000435532 TNXBP22105 4242 aa5.19□□□□□ -1.58
NEDD4-202ENST00000435532 MT1EP04732 61 aa5.17□□□□□ -1.58
NEDD4-202ENST00000435532 LCE2AQ5TA79 106 aaPredicted RBP5.16□□□□□ -1.58
NEDD4-202ENST00000435532 MT1LQ93083 61 aa5.16□□□□□ -1.58
NEDD4-202ENST00000435532 LRP2P98164 4655 aa5.15□□□□□ -1.59
NEDD4-202ENST00000435532 UBR4Q5T4S7 5183 aa5.11□□□□□ -1.59
NEDD4-202ENST00000435532 LPAP08519 4548 aa5.11□□□□□ -1.59
NEDD4-202ENST00000435532 LCE3DQ9BYE3 92 aa5.06□□□□□ -1.6
NEDD4-202ENST00000435532 FLGP20930 4061 aaPredicted RBP5.05□□□□□ -1.6
NEDD4-202ENST00000435532 MT1MQ8N339 61 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms