RNA–Protein interactions for RNA: ENST00000433661.1

PTP4A1P3-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 3, humanhuman

BASIC

Gene PTP4A1P3, Length 420 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P3-201ENST00000433661 FXYD3Q14802 87 aa1.62□□□□□ -2.15
PTP4A1P3-201ENST00000433661 GDF5OSQ5U4N7 250 aa1.62□□□□□ -2.15
PTP4A1P3-201ENST00000433661 IGKV2-40A0A087WW87 121 aaPredicted RBP1.61□□□□□ -2.15
PTP4A1P3-201ENST00000433661 IGKV2D-40P01614 121 aaPredicted RBP1.61□□□□□ -2.15
PTP4A1P3-201ENST00000433661 KRTAP5-10Q6L8G5 202 aa1.61□□□□□ -2.15
PTP4A1P3-201ENST00000433661 TMEM14CQ9P0S9 112 aa1.61□□□□□ -2.15
PTP4A1P3-201ENST00000433661 FLGP20930 4061 aaPredicted RBP1.61□□□□□ -2.15
PTP4A1P3-201ENST00000433661 H0Y9P7 68 aa1.6□□□□□ -2.15
PTP4A1P3-201ENST00000433661 FCER1GP30273 86 aa1.6□□□□□ -2.15
PTP4A1P3-201ENST00000433661 ZNF137PP52743 207 aa1.6□□□□□ -2.15
PTP4A1P3-201ENST00000433661 NREPQ16612 68 aa1.6□□□□□ -2.15
PTP4A1P3-201ENST00000433661 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.59□□□□□ -2.15
PTP4A1P3-201ENST00000433661 TRAV1-2A0A0B4J238 106 aa1.59□□□□□ -2.15
PTP4A1P3-201ENST00000433661 NDUFB1O75438 58 aa1.59□□□□□ -2.15
PTP4A1P3-201ENST00000433661 COX17Q14061 63 aa1.59□□□□□ -2.15
PTP4A1P3-201ENST00000433661 SPINK6Q6UWN8 80 aa1.59□□□□□ -2.15
PTP4A1P3-201ENST00000433661 TMEM263Q8WUH6 116 aaKnown RBP1.59□□□□□ -2.15
PTP4A1P3-201ENST00000433661 LINC00208Q96KT6 92 aa1.59□□□□□ -2.15
PTP4A1P3-201ENST00000433661 PLAC8Q9NZF1 115 aa1.59□□□□□ -2.15
PTP4A1P3-201ENST00000433661 TRAV21A0A0B4J279 112 aa1.58□□□□□ -2.16
PTP4A1P3-201ENST00000433661 TRBV30A0A0K0K1B3 111 aa1.58□□□□□ -2.16
PTP4A1P3-201ENST00000433661 H3BUA1 57 aa1.58□□□□□ -2.16
PTP4A1P3-201ENST00000433661 SPINK7P58062 85 aa1.58□□□□□ -2.16
PTP4A1P3-201ENST00000433661 KRTAP19-2Q3LHN2 52 aa1.58□□□□□ -2.16
PTP4A1P3-201ENST00000433661 C10orf113Q5VZT2 155 aa1.58□□□□□ -2.16
PTP4A1P3-201ENST00000433661 TRGV1A0A0A0MS02 117 aa1.57□□□□□ -2.16
PTP4A1P3-201ENST00000433661 FXYD4P59646 89 aa1.57□□□□□ -2.16
PTP4A1P3-201ENST00000433661 SMIM4Q8WVI0 70 aa1.57□□□□□ -2.16
PTP4A1P3-201ENST00000433661 SPRR4Q96PI1 79 aa1.57□□□□□ -2.16
PTP4A1P3-201ENST00000433661 KRTAP4-1Q9BYQ7 146 aa1.57□□□□□ -2.16
PTP4A1P3-201ENST00000433661 NMES1Q9C002 83 aa1.57□□□□□ -2.16
PTP4A1P3-201ENST00000433661 ACYP2P14621 99 aa1.56□□□□□ -2.16
PTP4A1P3-201ENST00000433661 USMG5Q96IX5 58 aa1.56□□□□□ -2.16
PTP4A1P3-201ENST00000433661 Q96NJ1 140 aa1.56□□□□□ -2.16
PTP4A1P3-201ENST00000433661 CMC2Q9NRP2 79 aa1.56□□□□□ -2.16
PTP4A1P3-201ENST00000433661 LOC110117498A0A087WWA1 95 aa1.55□□□□□ -2.16
PTP4A1P3-201ENST00000433661 INE1O15225 51 aa1.55□□□□□ -2.16
PTP4A1P3-201ENST00000433661 SPATA8Q6RVD6 105 aa1.55□□□□□ -2.16
PTP4A1P3-201ENST00000433661 ENHOQ6UWT2 76 aa1.55□□□□□ -2.16
PTP4A1P3-201ENST00000433661 TRBV6-1A0A0K0K1D8 114 aa1.54□□□□□ -2.16
PTP4A1P3-201ENST00000433661 K7EMI3 77 aa1.54□□□□□ -2.16
PTP4A1P3-201ENST00000433661 SPRR2EP22531 72 aa1.54□□□□□ -2.16
PTP4A1P3-201ENST00000433661 SPRR2BP35325 72 aa1.54□□□□□ -2.16
PTP4A1P3-201ENST00000433661 SPRR2AP35326 72 aa1.54□□□□□ -2.16
PTP4A1P3-201ENST00000433661 UBL5Q9BZL1 73 aa1.54□□□□□ -2.16
PTP4A1P3-201ENST00000433661 LINC00472Q9H8W2 130 aa1.53□□□□□ -2.16
PTP4A1P3-201ENST00000433661 ABRACLQ9P1F3 81 aa1.53□□□□□ -2.16
PTP4A1P3-201ENST00000433661 MUC5BQ9HC84 5762 aaPredicted RBP1.52□□□□□ -2.17
PTP4A1P3-201ENST00000433661 A0A1B0GU69 56 aa1.52□□□□□ -2.17
PTP4A1P3-201ENST00000433661 H3BNG1 76 aa1.52□□□□□ -2.17
PTP4A1P3-201ENST00000433661 Q6ZQY7 126 aa1.52□□□□□ -2.17
PTP4A1P3-201ENST00000433661 NDUFA4O00483 81 aa1.51□□□□□ -2.17
PTP4A1P3-201ENST00000433661 NDUFA3O95167 84 aa1.5□□□□□ -2.17
PTP4A1P3-201ENST00000433661 SPRR2DP22532 72 aa1.5□□□□□ -2.17
PTP4A1P3-201ENST00000433661 PLNP26678 52 aa1.5□□□□□ -2.17
PTP4A1P3-201ENST00000433661 LINC00959A0A1B0GUT2 108 aa1.49□□□□□ -2.17
PTP4A1P3-201ENST00000433661 DEFB130BP0DP73 79 aa1.49□□□□□ -2.17
PTP4A1P3-201ENST00000433661 DEFB130AP0DP74 79 aa1.49□□□□□ -2.17
PTP4A1P3-201ENST00000433661 DEFB131AP59861 70 aa1.49□□□□□ -2.17
PTP4A1P3-201ENST00000433661 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.49□□□□□ -2.17
PTP4A1P3-201ENST00000433661 OBSCN-AS1Q96MR7 158 aa1.49□□□□□ -2.17
PTP4A1P3-201ENST00000433661 SMIM27A0A1W2PRY6 76 aa1.48□□□□□ -2.17
PTP4A1P3-201ENST00000433661 NCR3O14931 201 aa1.48□□□□□ -2.17
PTP4A1P3-201ENST00000433661 COX7BP24311 80 aa1.48□□□□□ -2.17
PTP4A1P3-201ENST00000433661 SERF2P84101 59 aa1.48□□□□□ -2.17
PTP4A1P3-201ENST00000433661 COX6B2Q6YFQ2 88 aa1.48□□□□□ -2.17
PTP4A1P3-201ENST00000433661 LEAP2Q969E1 77 aa1.48□□□□□ -2.17
PTP4A1P3-201ENST00000433661 MUC5ACP98088 5654 aa1.48□□□□□ -2.17
PTP4A1P3-201ENST00000433661 TIMM8BQ9Y5J9 83 aaPredicted RBP1.47□□□□□ -2.17
PTP4A1P3-201ENST00000433661 A0A096LPF7 62 aa1.46□□□□□ -2.18
PTP4A1P3-201ENST00000433661 I3L3M4 83 aa1.46□□□□□ -2.18
PTP4A1P3-201ENST00000433661 Q6ZRX8 168 aa1.46□□□□□ -2.18
PTP4A1P3-201ENST00000433661 SSBP3-AS1Q7Z2R9 100 aa1.46□□□□□ -2.18
PTP4A1P3-201ENST00000433661 SMIM11BQ8TCY0 68 aa1.46□□□□□ -2.18
PTP4A1P3-201ENST00000433661 GVQW2A0A096LPI5 108 aaPredicted RBP1.45□□□□□ -2.18
PTP4A1P3-201ENST00000433661 IGIPA6NJ69 53 aa1.45□□□□□ -2.18
PTP4A1P3-201ENST00000433661 RPL38P63173 70 aaKnown RBP1.45□□□□□ -2.18
PTP4A1P3-201ENST00000433661 SPINK4O60575 86 aa1.44□□□□□ -2.18
PTP4A1P3-201ENST00000433661 WFDC10BQ8IUB3 73 aa1.44□□□□□ -2.18
PTP4A1P3-201ENST00000433661 PLAC4Q8WY50 150 aa1.44□□□□□ -2.18
PTP4A1P3-201ENST00000433661 SPRR2FQ96RM1 72 aa1.44□□□□□ -2.18
PTP4A1P3-201ENST00000433661 ETDCA0A1B0GVM5 59 aa1.43□□□□□ -2.18
PTP4A1P3-201ENST00000433661 MT2AP02795 61 aa1.43□□□□□ -2.18
PTP4A1P3-201ENST00000433661 RHPN1-AS1Q9BWJ2 59 aa1.43□□□□□ -2.18
PTP4A1P3-201ENST00000433661 CPSF4LA6NMK7 179 aaKnown RBP1.42□□□□□ -2.18
PTP4A1P3-201ENST00000433661 SNRPGP62308 76 aaKnown RBP1.42□□□□□ -2.18
PTP4A1P3-201ENST00000433661 LINC01556Q5JQF7 62 aa1.42□□□□□ -2.18
PTP4A1P3-201ENST00000433661 RPS27LQ71UM5 84 aaKnown RBP1.42□□□□□ -2.18
PTP4A1P3-201ENST00000433661 KCNQ1DNQ9H478 68 aa1.42□□□□□ -2.18
PTP4A1P3-201ENST00000433661 MT1FP04733 61 aa1.41□□□□□ -2.18
PTP4A1P3-201ENST00000433661 APELAP0DMC3 54 aa1.41□□□□□ -2.18
PTP4A1P3-201ENST00000433661 LINC01546A6NGU7 62 aa1.4□□□□□ -2.19
PTP4A1P3-201ENST00000433661 SPINK13Q1W4C9 94 aa1.4□□□□□ -2.19
PTP4A1P3-201ENST00000433661 LINC00575Q6W349 94 aa1.4□□□□□ -2.19
PTP4A1P3-201ENST00000433661 H0YGX0 51 aa1.39□□□□□ -2.19
PTP4A1P3-201ENST00000433661 FXYD6P3P58550 94 aa1.39□□□□□ -2.19
PTP4A1P3-201ENST00000433661 RPL37P61927 97 aaKnown RBP1.38□□□□□ -2.19
PTP4A1P3-201ENST00000433661 NOP10Q9NPE3 64 aaKnown RBP1.38□□□□□ -2.19
PTP4A1P3-201ENST00000433661 KLK9Q2XQG4 91 aa1.37□□□□□ -2.19
PTP4A1P3-201ENST00000433661 TMEM167AQ8TBQ9 72 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms