RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 SPATA8Q6RVD6 105 aa2.02□□□□□ -2.09
USP54-206ENST00000433394 UBE2DNLQ8IWF7 75 aa2.02□□□□□ -2.09
USP54-206ENST00000433394 CDKN2A-AS1Q9UH64 79 aa2.02□□□□□ -2.09
USP54-206ENST00000433394 APLNQ9ULZ1 77 aa2.02□□□□□ -2.09
USP54-206ENST00000433394 NBDYA0A0U1RRE5 68 aa2.01□□□□□ -2.09
USP54-206ENST00000433394 M0R2N4 97 aa2.01□□□□□ -2.09
USP54-206ENST00000433394 SPINK7P58062 85 aa2.01□□□□□ -2.09
USP54-206ENST00000433394 WFDC10BQ8IUB3 73 aa2.01□□□□□ -2.09
USP54-206ENST00000433394 CSMD3Q7Z407 3707 aa2.01□□□□□ -2.09
USP54-206ENST00000433394 OBSCN-AS1Q96MR7 158 aa2□□□□□ -2.09
USP54-206ENST00000433394 A0A087WTM6 91 aa1.99□□□□□ -2.09
USP54-206ENST00000433394 LCE6AA0A183 80 aa1.99□□□□□ -2.09
USP54-206ENST00000433394 A0A1B0GU69 56 aa1.99□□□□□ -2.09
USP54-206ENST00000433394 INE1O15225 51 aa1.99□□□□□ -2.09
USP54-206ENST00000433394 COX6A2Q02221 97 aa1.99□□□□□ -2.09
USP54-206ENST00000433394 VPS13DQ5THJ4 4388 aa1.99□□□□□ -2.09
USP54-206ENST00000433394 DEFB104AQ8WTQ1 72 aa1.98□□□□□ -2.09
USP54-206ENST00000433394 TOMM7Q9P0U1 55 aa1.98□□□□□ -2.09
USP54-206ENST00000433394 PLECQ15149 4684 aaKnown RBP1.97□□□□□ -2.09
USP54-206ENST00000433394 DNAH6Q9C0G6 4158 aa1.97□□□□□ -2.09
USP54-206ENST00000433394 NCR3O14931 201 aa1.97□□□□□ -2.09
USP54-206ENST00000433394 LINC00158P58513 81 aa1.97□□□□□ -2.09
USP54-206ENST00000433394 CLPSL2Q6UWE3 100 aa1.97□□□□□ -2.09
USP54-206ENST00000433394 LINC00308Q8TCZ7 52 aa1.97□□□□□ -2.09
USP54-206ENST00000433394 STARD9Q9P2P6 4700 aa1.96□□□□□ -2.1
USP54-206ENST00000433394 H0YGX0 51 aa1.96□□□□□ -2.1
USP54-206ENST00000433394 HAMPP81172 84 aa1.96□□□□□ -2.1
USP54-206ENST00000433394 Q6ZQY7 126 aa1.96□□□□□ -2.1
USP54-206ENST00000433394 Q96NJ1 140 aa1.96□□□□□ -2.1
USP54-206ENST00000433394 DNAH1Q9P2D7 4330 aa1.96□□□□□ -2.1
USP54-206ENST00000433394 ALMS1Q8TCU4 4167 aa1.95□□□□□ -2.1
USP54-206ENST00000433394 LY6G6CO95867 125 aa1.95□□□□□ -2.1
USP54-206ENST00000433394 COX7BP24311 80 aa1.95□□□□□ -2.1
USP54-206ENST00000433394 C6orf48Q9UBA6 75 aa1.95□□□□□ -2.1
USP54-206ENST00000433394 LYSTQ99698 3801 aa1.95□□□□□ -2.1
USP54-206ENST00000433394 ETDCA0A1B0GVM5 59 aa1.94□□□□□ -2.1
USP54-206ENST00000433394 LINC00472Q9H8W2 130 aa1.94□□□□□ -2.1
USP54-206ENST00000433394 KCNQ1DNQ9H478 68 aa1.93□□□□□ -2.1
USP54-206ENST00000433394 KMT2AQ03164 3969 aa1.92□□□□□ -2.1
USP54-206ENST00000433394 KRTAP21-2Q3LI59 83 aa1.92□□□□□ -2.1
USP54-206ENST00000433394 SMIM11BQ8TCY0 68 aa1.92□□□□□ -2.1
USP54-206ENST00000433394 SSBP3-AS1Q7Z2R9 100 aa1.91□□□□□ -2.1
USP54-206ENST00000433394 DNAH17Q9UFH2 4485 aa1.91□□□□□ -2.1
USP54-206ENST00000433394 DNAH2Q9P225 4427 aa1.91□□□□□ -2.1
USP54-206ENST00000433394 HECTD4Q9Y4D8 3996 aa1.9□□□□□ -2.1
USP54-206ENST00000433394 A0A096LNI7 61 aa1.9□□□□□ -2.11
USP54-206ENST00000433394 SPRR1AP35321 89 aa1.9□□□□□ -2.11
USP54-206ENST00000433394 Q6ZRX8 168 aa1.9□□□□□ -2.11
USP54-206ENST00000433394 SACSQ9NZJ4 4579 aa1.9□□□□□ -2.11
USP54-206ENST00000433394 DNAH10Q8IVF4 4471 aa1.9□□□□□ -2.11
USP54-206ENST00000433394 LINC00575Q6W349 94 aa1.89□□□□□ -2.11
USP54-206ENST00000433394 FRAS1Q86XX4 4008 aa1.89□□□□□ -2.11
USP54-206ENST00000433394 PLAC4Q8WY50 150 aa1.88□□□□□ -2.11
USP54-206ENST00000433394 FAT2Q9NYQ8 4349 aa1.88□□□□□ -2.11
USP54-206ENST00000433394 PKHD1P08F94 4074 aa1.87□□□□□ -2.11
USP54-206ENST00000433394 IGLV5-48A0A075B6I7 105 aa1.87□□□□□ -2.11
USP54-206ENST00000433394 KMT2CQ8NEZ4 4911 aaKnown RBP1.86□□□□□ -2.11
USP54-206ENST00000433394 PKD1P98161 4303 aa1.86□□□□□ -2.11
USP54-206ENST00000433394 SPRR1BP22528 89 aa1.86□□□□□ -2.11
USP54-206ENST00000433394 DNAH11Q96DT5 4516 aa1.86□□□□□ -2.11
USP54-206ENST00000433394 SRRM2Q9UQ35 2752 aaKnown RBP1.86□□□□□ -2.11
USP54-206ENST00000433394 DNAH5Q8TE73 4624 aa1.84□□□□□ -2.11
USP54-206ENST00000433394 RYR2Q92736 4967 aa1.84□□□□□ -2.11
USP54-206ENST00000433394 DNAH8Q96JB1 4490 aa1.84□□□□□ -2.12
USP54-206ENST00000433394 SPINK6Q6UWN8 80 aa1.83□□□□□ -2.12
USP54-206ENST00000433394 LRP1BQ9NZR2 4599 aa1.82□□□□□ -2.12
USP54-206ENST00000433394 VPS13BQ7Z7G8 4022 aa1.82□□□□□ -2.12
USP54-206ENST00000433394 PRLHP81277 87 aa1.82□□□□□ -2.12
USP54-206ENST00000433394 CRIPTQ9P021 101 aa1.82□□□□□ -2.12
USP54-206ENST00000433394 HYDINQ4G0P3 5121 aa1.82□□□□□ -2.12
USP54-206ENST00000433394 DYNC1H1Q14204 4646 aaKnown RBP1.81□□□□□ -2.12
USP54-206ENST00000433394 RPS29P62273 56 aaKnown RBP1.81□□□□□ -2.12
USP54-206ENST00000433394 FLG2Q5D862 2391 aaPredicted RBP1.8□□□□□ -2.12
USP54-206ENST00000433394 DEFB105AQ8NG35 78 aa1.8□□□□□ -2.12
USP54-206ENST00000433394 APOBP04114 4563 aaKnown RBP1.79□□□□□ -2.12
USP54-206ENST00000433394 SPINK1P00995 79 aa1.79□□□□□ -2.12
USP54-206ENST00000433394 RYR3Q15413 4870 aa1.79□□□□□ -2.12
USP54-206ENST00000433394 KRTAP10-4P60372 401 aaPredicted RBP1.77□□□□□ -2.13
USP54-206ENST00000433394 DMBT1Q9UGM3 2413 aaPredicted RBP1.77□□□□□ -2.13
USP54-206ENST00000433394 FAT1Q14517 4588 aa1.76□□□□□ -2.13
USP54-206ENST00000433394 HSPG2P98160 4391 aa1.76□□□□□ -2.13
USP54-206ENST00000433394 RPL37P61927 97 aaKnown RBP1.76□□□□□ -2.13
USP54-206ENST00000433394 Q5VSD8 79 aa1.76□□□□□ -2.13
USP54-206ENST00000433394 RYR1P21817 5038 aa1.74□□□□□ -2.13
USP54-206ENST00000433394 PKHD1L1Q86WI1 4243 aa1.74□□□□□ -2.13
USP54-206ENST00000433394 SMR3BP02814 79 aaPredicted RBP1.74□□□□□ -2.13
USP54-206ENST00000433394 TP53AIP1Q9HCN2 124 aa1.74□□□□□ -2.13
USP54-206ENST00000433394 COX6B2Q6YFQ2 88 aa1.73□□□□□ -2.13
USP54-206ENST00000433394 KIAA1109Q2LD37 5005 aa1.72□□□□□ -2.13
USP54-206ENST00000433394 K7EQZ3 153 aa1.72□□□□□ -2.13
USP54-206ENST00000433394 MRPL34Q9BQ48 92 aaKnown RBP1.72□□□□□ -2.13
USP54-206ENST00000433394 MYCBP2O75592 4640 aa1.7□□□□□ -2.14
USP54-206ENST00000433394 EPPK1P58107 5090 aaKnown RBP1.7□□□□□ -2.14
USP54-206ENST00000433394 BIRC6Q9NR09 4857 aa1.69□□□□□ -2.14
USP54-206ENST00000433394 TNXBP22105 4242 aa1.69□□□□□ -2.14
USP54-206ENST00000433394 HERC2O95714 4834 aa1.68□□□□□ -2.14
USP54-206ENST00000433394 FAT3Q8TDW7 4589 aa1.68□□□□□ -2.14
USP54-206ENST00000433394 MMP24-AS1A0A0U1RRL7 71 aa1.68□□□□□ -2.14
USP54-206ENST00000433394 CRCT1Q9UGL9 99 aa1.68□□□□□ -2.14
USP54-206ENST00000433394 LRP1Q07954 4544 aaKnown RBP1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 165.1 ms