RNA–Protein interactions for RNA: ENST00000426910.1

CROCCP1-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 1, humanhuman

BASIC

Gene CROCCP1, Length 5,675 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP1-201ENST00000426910 LORP23490 312 aaPredicted RBP7.43□□□□□ -1.22
CROCCP1-201ENST00000426910 INE1O15225 51 aa7.43□□□□□ -1.22
CROCCP1-201ENST00000426910 DNAH1Q9P2D7 4330 aa7.4□□□□□ -1.22
CROCCP1-201ENST00000426910 DNAH10Q8IVF4 4471 aa7.39□□□□□ -1.23
CROCCP1-201ENST00000426910 KRTAP12-3P60328 96 aa7.31□□□□□ -1.24
CROCCP1-201ENST00000426910 PLECQ15149 4684 aaKnown RBP7.3□□□□□ -1.24
CROCCP1-201ENST00000426910 LCE3AQ5TA76 89 aa7.27□□□□□ -1.24
CROCCP1-201ENST00000426910 DNAH5Q8TE73 4624 aa7.24□□□□□ -1.25
CROCCP1-201ENST00000426910 DNAH11Q96DT5 4516 aa7.2□□□□□ -1.26
CROCCP1-201ENST00000426910 DNAH2Q9P225 4427 aa7.14□□□□□ -1.27
CROCCP1-201ENST00000426910 DNAH17Q9UFH2 4485 aa7.14□□□□□ -1.27
CROCCP1-201ENST00000426910 KRTAP10-5P60370 271 aa7.12□□□□□ -1.27
CROCCP1-201ENST00000426910 KRTAP23-1A1A580 65 aa7.12□□□□□ -1.27
CROCCP1-201ENST00000426910 VPS13DQ5THJ4 4388 aa7.08□□□□□ -1.28
CROCCP1-201ENST00000426910 KRTAP8-1Q8IUC2 63 aa7.07□□□□□ -1.28
CROCCP1-201ENST00000426910 DNAH3Q8TD57 4116 aa7.07□□□□□ -1.28
CROCCP1-201ENST00000426910 DNAH8Q96JB1 4490 aa7.03□□□□□ -1.28
CROCCP1-201ENST00000426910 ANK2Q01484 3957 aa7.01□□□□□ -1.29
CROCCP1-201ENST00000426910 KRTAP4-1Q9BYQ7 146 aa7□□□□□ -1.29
CROCCP1-201ENST00000426910 STARD9Q9P2P6 4700 aa7□□□□□ -1.29
CROCCP1-201ENST00000426910 LRP1BQ9NZR2 4599 aa6.91□□□□□ -1.3
CROCCP1-201ENST00000426910 FRAS1Q86XX4 4008 aa6.89□□□□□ -1.31
CROCCP1-201ENST00000426910 DYNC1H1Q14204 4646 aaKnown RBP6.88□□□□□ -1.31
CROCCP1-201ENST00000426910 FAT1Q14517 4588 aa6.87□□□□□ -1.31
CROCCP1-201ENST00000426910 KMT2AQ03164 3969 aa6.87□□□□□ -1.31
CROCCP1-201ENST00000426910 MT1HP80294 61 aa6.86□□□□□ -1.31
CROCCP1-201ENST00000426910 SACSQ9NZJ4 4579 aa6.83□□□□□ -1.32
CROCCP1-201ENST00000426910 DYNC2H1Q8NCM8 4307 aaKnown RBP6.82□□□□□ -1.32
CROCCP1-201ENST00000426910 DNHD1Q96M86 4753 aa6.8□□□□□ -1.32
CROCCP1-201ENST00000426910 FAT2Q9NYQ8 4349 aa6.8□□□□□ -1.32
CROCCP1-201ENST00000426910 VPS13BQ7Z7G8 4022 aa6.77□□□□□ -1.33
CROCCP1-201ENST00000426910 PRKDCP78527 4128 aaKnown RBP6.71□□□□□ -1.34
CROCCP1-201ENST00000426910 MT2AP02795 61 aa6.71□□□□□ -1.34
CROCCP1-201ENST00000426910 CMYA5Q8N3K9 4069 aa6.7□□□□□ -1.34
CROCCP1-201ENST00000426910 LYSTQ99698 3801 aa6.69□□□□□ -1.34
CROCCP1-201ENST00000426910 SPRR2GQ9BYE4 73 aa6.67□□□□□ -1.34
CROCCP1-201ENST00000426910 APOBP04114 4563 aaKnown RBP6.64□□□□□ -1.35
CROCCP1-201ENST00000426910 RYR1P21817 5038 aa6.59□□□□□ -1.35
CROCCP1-201ENST00000426910 SPRR2FQ96RM1 72 aa6.59□□□□□ -1.36
CROCCP1-201ENST00000426910 DNAH6Q9C0G6 4158 aa6.57□□□□□ -1.36
CROCCP1-201ENST00000426910 KRTAP10-7P60409 375 aaPredicted RBP6.56□□□□□ -1.36
CROCCP1-201ENST00000426910 MT1FP04733 61 aa6.56□□□□□ -1.36
CROCCP1-201ENST00000426910 HECTD4Q9Y4D8 3996 aa6.54□□□□□ -1.36
CROCCP1-201ENST00000426910 DNAH7Q8WXX0 4024 aa6.5□□□□□ -1.37
CROCCP1-201ENST00000426910 KRTAP19-5Q3LI72 72 aa6.49□□□□□ -1.37
CROCCP1-201ENST00000426910 MYCBP2O75592 4640 aa6.48□□□□□ -1.37
CROCCP1-201ENST00000426910 KRTAP17-1Q9BYP8 105 aa6.43□□□□□ -1.38
CROCCP1-201ENST00000426910 LCE3CQ5T5A8 94 aa6.36□□□□□ -1.39
CROCCP1-201ENST00000426910 LRP1Q07954 4544 aaKnown RBP6.34□□□□□ -1.39
CROCCP1-201ENST00000426910 FAT3Q8TDW7 4589 aa6.33□□□□□ -1.4
CROCCP1-201ENST00000426910 KRTAP19-4Q3LI73 84 aa6.31□□□□□ -1.4
CROCCP1-201ENST00000426910 RYR3Q15413 4870 aa6.28□□□□□ -1.4
CROCCP1-201ENST00000426910 KRTAP19-8Q3LI54 63 aa6.22□□□□□ -1.41
CROCCP1-201ENST00000426910 KRTAP19-1Q8IUB9 90 aa6.22□□□□□ -1.41
CROCCP1-201ENST00000426910 KIAA1109Q2LD37 5005 aa6.21□□□□□ -1.42
CROCCP1-201ENST00000426910 SPRR2EP22531 72 aa6.2□□□□□ -1.42
CROCCP1-201ENST00000426910 SPRR2BP35325 72 aa6.2□□□□□ -1.42
CROCCP1-201ENST00000426910 SPRR2AP35326 72 aa6.2□□□□□ -1.42
CROCCP1-201ENST00000426910 HYDINQ4G0P3 5121 aa6.17□□□□□ -1.42
CROCCP1-201ENST00000426910 HERC1Q15751 4861 aa6.14□□□□□ -1.43
CROCCP1-201ENST00000426910 RYR2Q92736 4967 aa6.12□□□□□ -1.43
CROCCP1-201ENST00000426910 MT1XP80297 61 aa6.1□□□□□ -1.43
CROCCP1-201ENST00000426910 LCE3BQ5TA77 95 aa6.09□□□□□ -1.43
CROCCP1-201ENST00000426910 LPAP08519 4548 aa6.07□□□□□ -1.44
CROCCP1-201ENST00000426910 PKHD1P08F94 4074 aa6.06□□□□□ -1.44
CROCCP1-201ENST00000426910 HSPG2P98160 4391 aa6.06□□□□□ -1.44
CROCCP1-201ENST00000426910 LRP2P98164 4655 aa6□□□□□ -1.45
CROCCP1-201ENST00000426910 SPRR2DP22532 72 aa6□□□□□ -1.45
CROCCP1-201ENST00000426910 MT1BP07438 61 aa5.99□□□□□ -1.45
CROCCP1-201ENST00000426910 KRTAP9-8Q9BYQ0 159 aa5.98□□□□□ -1.45
CROCCP1-201ENST00000426910 KRTAP4-8A0A0G2JLE6 195 aa5.95□□□□□ -1.46
CROCCP1-201ENST00000426910 KRTAP4-8Q9BYQ9 185 aa5.95□□□□□ -1.46
CROCCP1-201ENST00000426910 MT1GP13640 62 aa5.94□□□□□ -1.46
CROCCP1-201ENST00000426910 PKD1P98161 4303 aa5.93□□□□□ -1.46
CROCCP1-201ENST00000426910 SPRR5A0A1B0GTR4 108 aa5.92□□□□□ -1.46
CROCCP1-201ENST00000426910 PKHD1L1Q86WI1 4243 aa5.9□□□□□ -1.46
CROCCP1-201ENST00000426910 LCE2BO14633 110 aa5.9□□□□□ -1.46
CROCCP1-201ENST00000426910 BIRC6Q9NR09 4857 aa5.9□□□□□ -1.46
CROCCP1-201ENST00000426910 LCE2CQ5TA81 110 aa5.88□□□□□ -1.47
CROCCP1-201ENST00000426910 KRTAP9-3Q9BYQ3 159 aa5.87□□□□□ -1.47
CROCCP1-201ENST00000426910 TNXBP22105 4242 aa5.87□□□□□ -1.47
CROCCP1-201ENST00000426910 KRTAP12-4P60329 112 aa5.87□□□□□ -1.47
CROCCP1-201ENST00000426910 HERC2O95714 4834 aa5.82□□□□□ -1.48
CROCCP1-201ENST00000426910 KMT2CQ8NEZ4 4911 aaKnown RBP5.81□□□□□ -1.48
CROCCP1-201ENST00000426910 KRTAP4-7Q9BYR0 210 aa5.73□□□□□ -1.49
CROCCP1-201ENST00000426910 LCE3DQ9BYE3 92 aa5.66□□□□□ -1.5
CROCCP1-201ENST00000426910 PCLOQ9Y6V0 5065 aa5.66□□□□□ -1.5
CROCCP1-201ENST00000426910 KRTAP19-2Q3LHN2 52 aa5.61□□□□□ -1.51
CROCCP1-201ENST00000426910 LCE3EQ5T5B0 92 aa5.55□□□□□ -1.52
CROCCP1-201ENST00000426910 KRTAP19-3Q7Z4W3 81 aa5.54□□□□□ -1.52
CROCCP1-201ENST00000426910 FLGP20930 4061 aaPredicted RBP5.53□□□□□ -1.52
CROCCP1-201ENST00000426910 MUC17Q685J3 4493 aa5.52□□□□□ -1.53
CROCCP1-201ENST00000426910 LCE2DQ5TA82 110 aaPredicted RBP5.51□□□□□ -1.53
CROCCP1-201ENST00000426910 MT1LQ93083 61 aa5.49□□□□□ -1.53
CROCCP1-201ENST00000426910 KRTAP19-6Q3LI70 58 aa5.43□□□□□ -1.54
CROCCP1-201ENST00000426910 MT1EP04732 61 aa5.42□□□□□ -1.54
CROCCP1-201ENST00000426910 LOC100996750A0A140TA64 210 aa5.41□□□□□ -1.54
CROCCP1-201ENST00000426910 MT4P47944 62 aa5.39□□□□□ -1.55
CROCCP1-201ENST00000426910 EPPK1P58107 5090 aaKnown RBP5.37□□□□□ -1.55
CROCCP1-201ENST00000426910 KRTAP9-2Q9BYQ4 174 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 2133.8 ms