RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 CUBNO60494 3623 aa7.36□□□□□ -1.23
ARHGEF28-203ENST00000426542 BSNQ9UPA5 3926 aa7.21□□□□□ -1.25
ARHGEF28-203ENST00000426542 VPS13CQ709C8 3753 aa7.2□□□□□ -1.26
ARHGEF28-203ENST00000426542 KRTAP4-1Q9BYQ7 146 aa7.18□□□□□ -1.26
ARHGEF28-203ENST00000426542 MT1HP80294 61 aa7.16□□□□□ -1.26
ARHGEF28-203ENST00000426542 DNAH9Q9NYC9 4486 aa7.14□□□□□ -1.27
ARHGEF28-203ENST00000426542 CSMD3Q7Z407 3707 aa7.09□□□□□ -1.27
ARHGEF28-203ENST00000426542 DNAH5Q8TE73 4624 aa7.06□□□□□ -1.28
ARHGEF28-203ENST00000426542 DNAH1Q9P2D7 4330 aa7.05□□□□□ -1.28
ARHGEF28-203ENST00000426542 MT2AP02795 61 aa7.04□□□□□ -1.28
ARHGEF28-203ENST00000426542 DNAH10Q8IVF4 4471 aa7.03□□□□□ -1.28
ARHGEF28-203ENST00000426542 DNAH2Q9P225 4427 aa7.02□□□□□ -1.29
ARHGEF28-203ENST00000426542 AKAP9Q99996 3911 aa6.99□□□□□ -1.29
ARHGEF28-203ENST00000426542 SPRR2GQ9BYE4 73 aa6.97□□□□□ -1.29
ARHGEF28-203ENST00000426542 SPRR2FQ96RM1 72 aa6.92□□□□□ -1.3
ARHGEF28-203ENST00000426542 KRTAP19-5Q3LI72 72 aa6.92□□□□□ -1.3
ARHGEF28-203ENST00000426542 KRTAP10-7P60409 375 aaPredicted RBP6.91□□□□□ -1.3
ARHGEF28-203ENST00000426542 MT1FP04733 61 aa6.89□□□□□ -1.31
ARHGEF28-203ENST00000426542 DNAH11Q96DT5 4516 aa6.87□□□□□ -1.31
ARHGEF28-203ENST00000426542 PLECQ15149 4684 aaKnown RBP6.85□□□□□ -1.31
ARHGEF28-203ENST00000426542 LCE3CQ5T5A8 94 aa6.81□□□□□ -1.32
ARHGEF28-203ENST00000426542 DNAH17Q9UFH2 4485 aa6.79□□□□□ -1.32
ARHGEF28-203ENST00000426542 VPS13DQ5THJ4 4388 aa6.73□□□□□ -1.33
ARHGEF28-203ENST00000426542 DNAH3Q8TD57 4116 aa6.71□□□□□ -1.33
ARHGEF28-203ENST00000426542 FAT2Q9NYQ8 4349 aa6.68□□□□□ -1.34
ARHGEF28-203ENST00000426542 DNAH8Q96JB1 4490 aa6.68□□□□□ -1.34
ARHGEF28-203ENST00000426542 FAT1Q14517 4588 aa6.66□□□□□ -1.34
ARHGEF28-203ENST00000426542 ZNF469Q96JG9 3925 aaPredicted RBP6.66□□□□□ -1.34
ARHGEF28-203ENST00000426542 LRP1BQ9NZR2 4599 aa6.64□□□□□ -1.35
ARHGEF28-203ENST00000426542 DYNC1H1Q14204 4646 aaKnown RBP6.61□□□□□ -1.35
ARHGEF28-203ENST00000426542 DYNC2H1Q8NCM8 4307 aaKnown RBP6.59□□□□□ -1.35
ARHGEF28-203ENST00000426542 SACSQ9NZJ4 4579 aa6.59□□□□□ -1.36
ARHGEF28-203ENST00000426542 SPRR2EP22531 72 aa6.53□□□□□ -1.36
ARHGEF28-203ENST00000426542 SPRR2BP35325 72 aa6.53□□□□□ -1.36
ARHGEF28-203ENST00000426542 SPRR2AP35326 72 aa6.53□□□□□ -1.36
ARHGEF28-203ENST00000426542 ANK2Q01484 3957 aa6.51□□□□□ -1.37
ARHGEF28-203ENST00000426542 KRTAP19-4Q3LI73 84 aa6.5□□□□□ -1.37
ARHGEF28-203ENST00000426542 STARD9Q9P2P6 4700 aa6.49□□□□□ -1.37
ARHGEF28-203ENST00000426542 LCE3BQ5TA77 95 aa6.44□□□□□ -1.38
ARHGEF28-203ENST00000426542 KRTAP19-8Q3LI54 63 aa6.4□□□□□ -1.38
ARHGEF28-203ENST00000426542 RYR1P21817 5038 aa6.39□□□□□ -1.39
ARHGEF28-203ENST00000426542 APOBP04114 4563 aaKnown RBP6.38□□□□□ -1.39
ARHGEF28-203ENST00000426542 VPS13BQ7Z7G8 4022 aa6.38□□□□□ -1.39
ARHGEF28-203ENST00000426542 KRTAP19-1Q8IUB9 90 aa6.37□□□□□ -1.39
ARHGEF28-203ENST00000426542 DNHD1Q96M86 4753 aa6.36□□□□□ -1.39
ARHGEF28-203ENST00000426542 PRKDCP78527 4128 aaKnown RBP6.35□□□□□ -1.39
ARHGEF28-203ENST00000426542 DNAH7Q8WXX0 4024 aa6.34□□□□□ -1.39
ARHGEF28-203ENST00000426542 MT1GP13640 62 aa6.34□□□□□ -1.4
ARHGEF28-203ENST00000426542 MT1XP80297 61 aa6.32□□□□□ -1.4
ARHGEF28-203ENST00000426542 SPRR2DP22532 72 aa6.31□□□□□ -1.4
ARHGEF28-203ENST00000426542 KMT2AQ03164 3969 aa6.31□□□□□ -1.4
ARHGEF28-203ENST00000426542 CMYA5Q8N3K9 4069 aa6.28□□□□□ -1.4
ARHGEF28-203ENST00000426542 LCE2BO14633 110 aa6.25□□□□□ -1.41
ARHGEF28-203ENST00000426542 DNAH6Q9C0G6 4158 aa6.23□□□□□ -1.41
ARHGEF28-203ENST00000426542 KRTAP12-4P60329 112 aa6.22□□□□□ -1.41
ARHGEF28-203ENST00000426542 FAT3Q8TDW7 4589 aa6.22□□□□□ -1.41
ARHGEF28-203ENST00000426542 KRTAP17-1Q9BYP8 105 aa6.21□□□□□ -1.42
ARHGEF28-203ENST00000426542 MT1BP07438 61 aa6.2□□□□□ -1.42
ARHGEF28-203ENST00000426542 FRAS1Q86XX4 4008 aa6.2□□□□□ -1.42
ARHGEF28-203ENST00000426542 LRP1Q07954 4544 aaKnown RBP6.17□□□□□ -1.42
ARHGEF28-203ENST00000426542 KRTAP4-8A0A0G2JLE6 195 aa6.16□□□□□ -1.42
ARHGEF28-203ENST00000426542 KRTAP4-8Q9BYQ9 185 aa6.16□□□□□ -1.42
ARHGEF28-203ENST00000426542 RYR3Q15413 4870 aa6.14□□□□□ -1.43
ARHGEF28-203ENST00000426542 KRTAP9-8Q9BYQ0 159 aa6.13□□□□□ -1.43
ARHGEF28-203ENST00000426542 LYSTQ99698 3801 aa6.11□□□□□ -1.43
ARHGEF28-203ENST00000426542 LCE3DQ9BYE3 92 aa6.03□□□□□ -1.44
ARHGEF28-203ENST00000426542 KRTAP9-3Q9BYQ3 159 aa6.01□□□□□ -1.45
ARHGEF28-203ENST00000426542 MYCBP2O75592 4640 aa5.94□□□□□ -1.46
ARHGEF28-203ENST00000426542 HERC1Q15751 4861 aa5.93□□□□□ -1.46
ARHGEF28-203ENST00000426542 LCE2CQ5TA81 110 aa5.92□□□□□ -1.46
ARHGEF28-203ENST00000426542 HECTD4Q9Y4D8 3996 aa5.92□□□□□ -1.46
ARHGEF28-203ENST00000426542 SPRR5A0A1B0GTR4 108 aa5.92□□□□□ -1.46
ARHGEF28-203ENST00000426542 LCE3EQ5T5B0 92 aa5.91□□□□□ -1.46
ARHGEF28-203ENST00000426542 HSPG2P98160 4391 aa5.86□□□□□ -1.47
ARHGEF28-203ENST00000426542 KRTAP19-3Q7Z4W3 81 aa5.85□□□□□ -1.47
ARHGEF28-203ENST00000426542 KRTAP4-7Q9BYR0 210 aa5.83□□□□□ -1.48
ARHGEF28-203ENST00000426542 RYR2Q92736 4967 aa5.82□□□□□ -1.48
ARHGEF28-203ENST00000426542 PKD1P98161 4303 aa5.81□□□□□ -1.48
ARHGEF28-203ENST00000426542 PKHD1L1Q86WI1 4243 aa5.81□□□□□ -1.48
ARHGEF28-203ENST00000426542 MT1LQ93083 61 aa5.77□□□□□ -1.49
ARHGEF28-203ENST00000426542 LCE2DQ5TA82 110 aaPredicted RBP5.77□□□□□ -1.49
ARHGEF28-203ENST00000426542 MT1EP04732 61 aa5.71□□□□□ -1.49
ARHGEF28-203ENST00000426542 LPAP08519 4548 aa5.66□□□□□ -1.5
ARHGEF28-203ENST00000426542 KIAA1109Q2LD37 5005 aa5.65□□□□□ -1.5
ARHGEF28-203ENST00000426542 MT4P47944 62 aa5.62□□□□□ -1.51
ARHGEF28-203ENST00000426542 MT1MQ8N339 61 aa5.57□□□□□ -1.52
ARHGEF28-203ENST00000426542 MT3P25713 68 aa5.56□□□□□ -1.52
ARHGEF28-203ENST00000426542 LOC100996750A0A140TA64 210 aa5.54□□□□□ -1.52
ARHGEF28-203ENST00000426542 KRTAP19-2Q3LHN2 52 aa5.53□□□□□ -1.52
ARHGEF28-203ENST00000426542 LRP2P98164 4655 aa5.52□□□□□ -1.53
ARHGEF28-203ENST00000426542 PRM1P04553 51 aa5.51□□□□□ -1.53
ARHGEF28-203ENST00000426542 PKHD1P08F94 4074 aa5.5□□□□□ -1.53
ARHGEF28-203ENST00000426542 HERC2O95714 4834 aa5.49□□□□□ -1.53
ARHGEF28-203ENST00000426542 BIRC6Q9NR09 4857 aa5.48□□□□□ -1.53
ARHGEF28-203ENST00000426542 TNXBP22105 4242 aa5.46□□□□□ -1.54
ARHGEF28-203ENST00000426542 KRTAP4-3Q9BYR4 195 aa5.46□□□□□ -1.54
ARHGEF28-203ENST00000426542 LCE1BQ5T7P3 118 aa5.44□□□□□ -1.54
ARHGEF28-203ENST00000426542 HYDINQ4G0P3 5121 aa5.44□□□□□ -1.54
ARHGEF28-203ENST00000426542 KRTAP19-6Q3LI70 58 aa5.43□□□□□ -1.54
ARHGEF28-203ENST00000426542 PCLOQ9Y6V0 5065 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms