RNA–Protein interactions for RNA: ENST00000426431.2

SP1-202, Transcript of Sp1 transcription factor, humanhuman

TSL 1 (best) BASIC

Gene SP1, Length 7,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-202ENST00000426431 KRTAP8-1Q8IUC2 63 aa4.23□□□□□ -1.73
SP1-202ENST00000426431 DNAH2Q9P225 4427 aa4.23□□□□□ -1.73
SP1-202ENST00000426431 LCE3AQ5TA76 89 aa4.23□□□□□ -1.73
SP1-202ENST00000426431 MT1HP80294 61 aa4.22□□□□□ -1.73
SP1-202ENST00000426431 KRTAP19-4Q3LI73 84 aa4.21□□□□□ -1.73
SP1-202ENST00000426431 DNAH5Q8TE73 4624 aa4.21□□□□□ -1.74
SP1-202ENST00000426431 SPRR2GQ9BYE4 73 aa4.21□□□□□ -1.74
SP1-202ENST00000426431 LORP23490 312 aaPredicted RBP4.16□□□□□ -1.74
SP1-202ENST00000426431 VPS13DQ5THJ4 4388 aa4.15□□□□□ -1.74
SP1-202ENST00000426431 SVEP1Q4LDE5 3571 aa4.15□□□□□ -1.75
SP1-202ENST00000426431 MT2AP02795 61 aa4.15□□□□□ -1.75
SP1-202ENST00000426431 KRTAP4-1Q9BYQ7 146 aa4.14□□□□□ -1.75
SP1-202ENST00000426431 PLECQ15149 4684 aaKnown RBP4.13□□□□□ -1.75
SP1-202ENST00000426431 AKAP9Q99996 3911 aa4.12□□□□□ -1.75
SP1-202ENST00000426431 CRCT1Q9UGL9 99 aa4.11□□□□□ -1.75
SP1-202ENST00000426431 DNAH17Q9UFH2 4485 aa4.11□□□□□ -1.75
SP1-202ENST00000426431 DYNC2H1Q8NCM8 4307 aaKnown RBP4.05□□□□□ -1.76
SP1-202ENST00000426431 DYNC1H1Q14204 4646 aaKnown RBP4.05□□□□□ -1.76
SP1-202ENST00000426431 VPS13CQ709C8 3753 aa4.04□□□□□ -1.76
SP1-202ENST00000426431 FAT2Q9NYQ8 4349 aa4.03□□□□□ -1.76
SP1-202ENST00000426431 DNAH3Q8TD57 4116 aa4.01□□□□□ -1.77
SP1-202ENST00000426431 DNAH6Q9C0G6 4158 aa4.01□□□□□ -1.77
SP1-202ENST00000426431 MT1FP04733 61 aa4.01□□□□□ -1.77
SP1-202ENST00000426431 LRP1BQ9NZR2 4599 aa3.97□□□□□ -1.77
SP1-202ENST00000426431 DNHD1Q96M86 4753 aa3.97□□□□□ -1.77
SP1-202ENST00000426431 KRTAP19-8Q3LI54 63 aa3.95□□□□□ -1.78
SP1-202ENST00000426431 ZNF469Q96JG9 3925 aaPredicted RBP3.95□□□□□ -1.78
SP1-202ENST00000426431 ANK2Q01484 3957 aa3.95□□□□□ -1.78
SP1-202ENST00000426431 KRTAP10-7P60409 375 aaPredicted RBP3.93□□□□□ -1.78
SP1-202ENST00000426431 SACSQ9NZJ4 4579 aa3.92□□□□□ -1.78
SP1-202ENST00000426431 DNAH8Q96JB1 4490 aa3.91□□□□□ -1.78
SP1-202ENST00000426431 SPRR2FQ96RM1 72 aa3.89□□□□□ -1.79
SP1-202ENST00000426431 KRTAP10-5P60370 271 aa3.88□□□□□ -1.79
SP1-202ENST00000426431 STARD9Q9P2P6 4700 aa3.87□□□□□ -1.79
SP1-202ENST00000426431 KRTAP19-5Q3LI72 72 aa3.84□□□□□ -1.79
SP1-202ENST00000426431 RYR1P21817 5038 aa3.84□□□□□ -1.8
SP1-202ENST00000426431 FAT1Q14517 4588 aa3.84□□□□□ -1.8
SP1-202ENST00000426431 LCE3CQ5T5A8 94 aa3.83□□□□□ -1.8
SP1-202ENST00000426431 PRKDCP78527 4128 aaKnown RBP3.83□□□□□ -1.8
SP1-202ENST00000426431 DNAH7Q8WXX0 4024 aa3.82□□□□□ -1.8
SP1-202ENST00000426431 KRTAP19-1Q8IUB9 90 aa3.8□□□□□ -1.8
SP1-202ENST00000426431 LRP1Q07954 4544 aaKnown RBP3.79□□□□□ -1.8
SP1-202ENST00000426431 CSMD3Q7Z407 3707 aa3.77□□□□□ -1.81
SP1-202ENST00000426431 HSPG2P98160 4391 aa3.76□□□□□ -1.81
SP1-202ENST00000426431 RYR2Q92736 4967 aa3.76□□□□□ -1.81
SP1-202ENST00000426431 RYR3Q15413 4870 aa3.75□□□□□ -1.81
SP1-202ENST00000426431 FAT3Q8TDW7 4589 aa3.75□□□□□ -1.81
SP1-202ENST00000426431 HERC1Q15751 4861 aa3.74□□□□□ -1.81
SP1-202ENST00000426431 APOBP04114 4563 aaKnown RBP3.74□□□□□ -1.81
SP1-202ENST00000426431 VPS13BQ7Z7G8 4022 aa3.73□□□□□ -1.81
SP1-202ENST00000426431 KRTAP9-8Q9BYQ0 159 aa3.72□□□□□ -1.81
SP1-202ENST00000426431 SPRR2EP22531 72 aa3.7□□□□□ -1.82
SP1-202ENST00000426431 SPRR2BP35325 72 aa3.7□□□□□ -1.82
SP1-202ENST00000426431 SPRR2AP35326 72 aa3.7□□□□□ -1.82
SP1-202ENST00000426431 MT1XP80297 61 aa3.69□□□□□ -1.82
SP1-202ENST00000426431 KRTAP17-1Q9BYP8 105 aa3.69□□□□□ -1.82
SP1-202ENST00000426431 CMYA5Q8N3K9 4069 aa3.69□□□□□ -1.82
SP1-202ENST00000426431 MT1BP07438 61 aa3.68□□□□□ -1.82
SP1-202ENST00000426431 KMT2AQ03164 3969 aa3.67□□□□□ -1.82
SP1-202ENST00000426431 FRAS1Q86XX4 4008 aa3.66□□□□□ -1.82
SP1-202ENST00000426431 KRTAP9-3Q9BYQ3 159 aa3.66□□□□□ -1.82
SP1-202ENST00000426431 LCE2CQ5TA81 110 aa3.65□□□□□ -1.82
SP1-202ENST00000426431 MT1GP13640 62 aa3.64□□□□□ -1.83
SP1-202ENST00000426431 MYCBP2O75592 4640 aa3.63□□□□□ -1.83
SP1-202ENST00000426431 PKHD1L1Q86WI1 4243 aa3.63□□□□□ -1.83
SP1-202ENST00000426431 LCE2BO14633 110 aa3.62□□□□□ -1.83
SP1-202ENST00000426431 SPRR2DP22532 72 aa3.61□□□□□ -1.83
SP1-202ENST00000426431 KIAA1109Q2LD37 5005 aa3.6□□□□□ -1.83
SP1-202ENST00000426431 BIRC6Q9NR09 4857 aa3.6□□□□□ -1.83
SP1-202ENST00000426431 KRTAP12-4P60329 112 aa3.59□□□□□ -1.84
SP1-202ENST00000426431 PKD1P98161 4303 aa3.58□□□□□ -1.84
SP1-202ENST00000426431 HECTD4Q9Y4D8 3996 aa3.57□□□□□ -1.84
SP1-202ENST00000426431 LYSTQ99698 3801 aa3.54□□□□□ -1.84
SP1-202ENST00000426431 HERC2O95714 4834 aa3.5□□□□□ -1.85
SP1-202ENST00000426431 KRTAP19-2Q3LHN2 52 aa3.48□□□□□ -1.85
SP1-202ENST00000426431 SPRR5A0A1B0GTR4 108 aa3.46□□□□□ -1.85
SP1-202ENST00000426431 KRTAP19-3Q7Z4W3 81 aa3.46□□□□□ -1.86
SP1-202ENST00000426431 KRTAP19-6Q3LI70 58 aa3.45□□□□□ -1.86
SP1-202ENST00000426431 LCE2DQ5TA82 110 aaPredicted RBP3.44□□□□□ -1.86
SP1-202ENST00000426431 MT1LQ93083 61 aa3.43□□□□□ -1.86
SP1-202ENST00000426431 PCLOQ9Y6V0 5065 aa3.42□□□□□ -1.86
SP1-202ENST00000426431 LCE3BQ5TA77 95 aa3.39□□□□□ -1.87
SP1-202ENST00000426431 KRTAP4-8A0A0G2JLE6 195 aa3.38□□□□□ -1.87
SP1-202ENST00000426431 KRTAP4-8Q9BYQ9 185 aa3.38□□□□□ -1.87
SP1-202ENST00000426431 FLGP20930 4061 aaPredicted RBP3.38□□□□□ -1.87
SP1-202ENST00000426431 MT1EP04732 61 aa3.37□□□□□ -1.87
SP1-202ENST00000426431 PKHD1P08F94 4074 aa3.35□□□□□ -1.87
SP1-202ENST00000426431 KRTAP9-2Q9BYQ4 174 aa3.32□□□□□ -1.88
SP1-202ENST00000426431 LCE3DQ9BYE3 92 aa3.32□□□□□ -1.88
SP1-202ENST00000426431 LCE2AQ5TA79 106 aaPredicted RBP3.32□□□□□ -1.88
SP1-202ENST00000426431 LCE3EQ5T5B0 92 aa3.29□□□□□ -1.88
SP1-202ENST00000426431 LRP2P98164 4655 aa3.29□□□□□ -1.88
SP1-202ENST00000426431 MUC17Q685J3 4493 aa3.28□□□□□ -1.88
SP1-202ENST00000426431 TNXBP22105 4242 aa3.26□□□□□ -1.89
SP1-202ENST00000426431 MT1MQ8N339 61 aa3.26□□□□□ -1.89
SP1-202ENST00000426431 MT3P25713 68 aa3.24□□□□□ -1.89
SP1-202ENST00000426431 HYDINQ4G0P3 5121 aa3.22□□□□□ -1.89
SP1-202ENST00000426431 KRTAP9-6A0A140TA67 174 aa3.21□□□□□ -1.9
SP1-202ENST00000426431 LCE1AQ5T7P2 110 aa3.17□□□□□ -1.9
SP1-202ENST00000426431 EPPK1P58107 5090 aaKnown RBP3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms