RNA–Protein interactions for RNA: ENST00000425804.1

R3HDM1-205, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-205ENST00000425804 HERC2O95714 4834 aa1.24□□□□□ -2.21
R3HDM1-205ENST00000425804 FRAS1Q86XX4 4008 aa1.24□□□□□ -2.21
R3HDM1-205ENST00000425804 A0A087WTM6 91 aa1.24□□□□□ -2.21
R3HDM1-205ENST00000425804 LCE6AA0A183 80 aa1.24□□□□□ -2.21
R3HDM1-205ENST00000425804 H0YGX0 51 aa1.24□□□□□ -2.21
R3HDM1-205ENST00000425804 H3BUT2 72 aa1.24□□□□□ -2.21
R3HDM1-205ENST00000425804 ATXN8Q156A1 80 aa1.24□□□□□ -2.21
R3HDM1-205ENST00000425804 UNQ6190/PRO20217Q6UXQ8 127 aa1.24□□□□□ -2.21
R3HDM1-205ENST00000425804 LINC01600Q96MT4 127 aa1.24□□□□□ -2.21
R3HDM1-205ENST00000425804 C6orf48Q9UBA6 75 aa1.24□□□□□ -2.21
R3HDM1-205ENST00000425804 HECTD4Q9Y4D8 3996 aa1.24□□□□□ -2.21
R3HDM1-205ENST00000425804 ABCA13Q86UQ4 5058 aa1.24□□□□□ -2.21
R3HDM1-205ENST00000425804 LOC101927531A0A1B0GV80 90 aa1.23□□□□□ -2.21
R3HDM1-205ENST00000425804 ETDCA0A1B0GVM5 59 aa1.23□□□□□ -2.21
R3HDM1-205ENST00000425804 NCR3O14931 201 aa1.23□□□□□ -2.21
R3HDM1-205ENST00000425804 SPAG11AQ6PDA7 123 aa1.23□□□□□ -2.21
R3HDM1-205ENST00000425804 Q6ZRN7 208 aaPredicted RBP1.23□□□□□ -2.21
R3HDM1-205ENST00000425804 LINC00643Q86TS7 51 aa1.23□□□□□ -2.21
R3HDM1-205ENST00000425804 CYSTM1Q9H1C7 97 aa1.23□□□□□ -2.21
R3HDM1-205ENST00000425804 KMT2AQ03164 3969 aa1.22□□□□□ -2.21
R3HDM1-205ENST00000425804 DNAH11Q96DT5 4516 aa1.22□□□□□ -2.21
R3HDM1-205ENST00000425804 LOC110117498A0A087WWA1 95 aa1.22□□□□□ -2.21
R3HDM1-205ENST00000425804 F8WEM9 126 aa1.22□□□□□ -2.21
R3HDM1-205ENST00000425804 COX7BP24311 80 aa1.22□□□□□ -2.21
R3HDM1-205ENST00000425804 RPL37AP61513 92 aaKnown RBP1.22□□□□□ -2.21
R3HDM1-205ENST00000425804 RYR1P21817 5038 aa1.21□□□□□ -2.22
R3HDM1-205ENST00000425804 DNAH8Q96JB1 4490 aa1.21□□□□□ -2.22
R3HDM1-205ENST00000425804 A0A096LNI7 61 aa1.21□□□□□ -2.22
R3HDM1-205ENST00000425804 IGKV3D-7A0A0C4DH55 119 aa1.21□□□□□ -2.22
R3HDM1-205ENST00000425804 SMIM11BQ8TCY0 68 aa1.21□□□□□ -2.22
R3HDM1-205ENST00000425804 KCNQ1DNQ9H478 68 aa1.21□□□□□ -2.22
R3HDM1-205ENST00000425804 DNAH5Q8TE73 4624 aa1.21□□□□□ -2.22
R3HDM1-205ENST00000425804 PKHD1P08F94 4074 aa1.2□□□□□ -2.22
R3HDM1-205ENST00000425804 SPRR1AP35321 89 aa1.2□□□□□ -2.22
R3HDM1-205ENST00000425804 LINC00575Q6W349 94 aa1.2□□□□□ -2.22
R3HDM1-205ENST00000425804 Q6ZRX8 168 aa1.2□□□□□ -2.22
R3HDM1-205ENST00000425804 PLAC8Q9NZF1 115 aa1.2□□□□□ -2.22
R3HDM1-205ENST00000425804 FAT2Q9NYQ8 4349 aa1.2□□□□□ -2.22
R3HDM1-205ENST00000425804 PKD1P98161 4303 aa1.2□□□□□ -2.22
R3HDM1-205ENST00000425804 DYNC1H1Q14204 4646 aaKnown RBP1.2□□□□□ -2.22
R3HDM1-205ENST00000425804 Q6ZQY7 126 aa1.19□□□□□ -2.22
R3HDM1-205ENST00000425804 Q6ZSA8 131 aa1.19□□□□□ -2.22
R3HDM1-205ENST00000425804 LINC01558Q9Y6Z2 57 aa1.19□□□□□ -2.22
R3HDM1-205ENST00000425804 LRP1BQ9NZR2 4599 aa1.18□□□□□ -2.22
R3HDM1-205ENST00000425804 HSPG2P98160 4391 aa1.18□□□□□ -2.22
R3HDM1-205ENST00000425804 IGLV5-48A0A075B6I7 105 aa1.18□□□□□ -2.22
R3HDM1-205ENST00000425804 UQCR11O14957 56 aa1.18□□□□□ -2.22
R3HDM1-205ENST00000425804 Q6JHZ5 121 aa1.18□□□□□ -2.22
R3HDM1-205ENST00000425804 LINC00208Q96KT6 92 aa1.18□□□□□ -2.22
R3HDM1-205ENST00000425804 APOBP04114 4563 aaKnown RBP1.17□□□□□ -2.22
R3HDM1-205ENST00000425804 IGKV4-1P06312 121 aa1.17□□□□□ -2.22
R3HDM1-205ENST00000425804 PRLHP81277 87 aa1.17□□□□□ -2.22
R3HDM1-205ENST00000425804 ATP5EP2Q5VTU8 51 aa1.17□□□□□ -2.22
R3HDM1-205ENST00000425804 SPINK6Q6UWN8 80 aa1.17□□□□□ -2.22
R3HDM1-205ENST00000425804 DEFB105AQ8NG35 78 aa1.17□□□□□ -2.22
R3HDM1-205ENST00000425804 UBL5Q9BZL1 73 aa1.17□□□□□ -2.22
R3HDM1-205ENST00000425804 VPS13BQ7Z7G8 4022 aa1.17□□□□□ -2.22
R3HDM1-205ENST00000425804 UBR4Q5T4S7 5183 aa1.16□□□□□ -2.22
R3HDM1-205ENST00000425804 SPRR1BP22528 89 aa1.16□□□□□ -2.22
R3HDM1-205ENST00000425804 SSBP3-AS1Q7Z2R9 100 aa1.16□□□□□ -2.22
R3HDM1-205ENST00000425804 KRTAP13-1Q8IUC0 172 aa1.16□□□□□ -2.22
R3HDM1-205ENST00000425804 OBSCN-AS1Q96MR7 158 aa1.16□□□□□ -2.22
R3HDM1-205ENST00000425804 SPRR4Q96PI1 79 aa1.16□□□□□ -2.22
R3HDM1-205ENST00000425804 PRR15LQ9BU68 103 aa1.16□□□□□ -2.22
R3HDM1-205ENST00000425804 PKHD1L1Q86WI1 4243 aa1.16□□□□□ -2.22
R3HDM1-205ENST00000425804 FLG2Q5D862 2391 aaPredicted RBP1.15□□□□□ -2.22
R3HDM1-205ENST00000425804 HERC1Q15751 4861 aa1.15□□□□□ -2.22
R3HDM1-205ENST00000425804 TRBV7-4A0A0J9YYF1 115 aa1.15□□□□□ -2.23
R3HDM1-205ENST00000425804 NDUFB1O75438 58 aa1.15□□□□□ -2.23
R3HDM1-205ENST00000425804 KRTAP12-4P60329 112 aa1.15□□□□□ -2.23
R3HDM1-205ENST00000425804 NREPQ16612 68 aa1.15□□□□□ -2.23
R3HDM1-205ENST00000425804 LINC00846Q9NV44 126 aa1.15□□□□□ -2.23
R3HDM1-205ENST00000425804 FAT1Q14517 4588 aa1.14□□□□□ -2.23
R3HDM1-205ENST00000425804 SPINK1P00995 79 aa1.14□□□□□ -2.23
R3HDM1-205ENST00000425804 ACYP2P14621 99 aa1.14□□□□□ -2.23
R3HDM1-205ENST00000425804 RPS29P62273 56 aaKnown RBP1.14□□□□□ -2.23
R3HDM1-205ENST00000425804 KRTAP13-4Q3LI77 160 aa1.14□□□□□ -2.23
R3HDM1-205ENST00000425804 Q5VSD8 79 aa1.14□□□□□ -2.23
R3HDM1-205ENST00000425804 Q96NJ1 140 aa1.14□□□□□ -2.23
R3HDM1-205ENST00000425804 SRRM2Q9UQ35 2752 aaKnown RBP1.14□□□□□ -2.23
R3HDM1-205ENST00000425804 DMBT1Q9UGM3 2413 aaPredicted RBP1.14□□□□□ -2.23
R3HDM1-205ENST00000425804 SMR3BP02814 79 aaPredicted RBP1.13□□□□□ -2.23
R3HDM1-205ENST00000425804 HAMPP81172 84 aa1.13□□□□□ -2.23
R3HDM1-205ENST00000425804 A0A087WVE0 104 aa1.12□□□□□ -2.23
R3HDM1-205ENST00000425804 MYCBP2O75592 4640 aa1.12□□□□□ -2.23
R3HDM1-205ENST00000425804 FAT3Q8TDW7 4589 aa1.12□□□□□ -2.23
R3HDM1-205ENST00000425804 ZCCHC13Q8WW36 166 aaKnown RBP1.11□□□□□ -2.23
R3HDM1-205ENST00000425804 HMCN2Q8NDA2 5059 aa1.11□□□□□ -2.23
R3HDM1-205ENST00000425804 H0Y9P7 68 aa1.1□□□□□ -2.23
R3HDM1-205ENST00000425804 SPATA8Q6RVD6 105 aa1.1□□□□□ -2.23
R3HDM1-205ENST00000425804 PLAC4Q8WY50 150 aa1.1□□□□□ -2.23
R3HDM1-205ENST00000425804 LINC00472Q9H8W2 130 aa1.1□□□□□ -2.23
R3HDM1-205ENST00000425804 TP53AIP1Q9HCN2 124 aa1.1□□□□□ -2.23
R3HDM1-205ENST00000425804 K7EQZ3 153 aa1.09□□□□□ -2.23
R3HDM1-205ENST00000425804 KRTAP10-4P60372 401 aaPredicted RBP1.09□□□□□ -2.23
R3HDM1-205ENST00000425804 PCOTHQ58A44 107 aa1.09□□□□□ -2.23
R3HDM1-205ENST00000425804 MRPL34Q9BQ48 92 aaKnown RBP1.09□□□□□ -2.23
R3HDM1-205ENST00000425804 RNF213Q63HN8 5207 aa1.08□□□□□ -2.24
R3HDM1-205ENST00000425804 TNXBP22105 4242 aa1.08□□□□□ -2.24
R3HDM1-205ENST00000425804 WFDC13Q8IUB5 93 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms