RNA–Protein interactions for RNA: ENST00000419022.6

PAX6-209, Transcript of paired box 6, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PAX6, Length 6,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-209ENST00000419022 VPS13CQ709C8 3753 aa3.8□□□□□ -1.8
PAX6-209ENST00000419022 CSMD3Q7Z407 3707 aa3.79□□□□□ -1.8
PAX6-209ENST00000419022 CSMD2Q7Z408 3487 aa3.76□□□□□ -1.81
PAX6-209ENST00000419022 TRRAPQ9Y4A5 3859 aa3.74□□□□□ -1.81
PAX6-209ENST00000419022 SPRR2FQ96RM1 72 aa3.74□□□□□ -1.81
PAX6-209ENST00000419022 KRTAP10-7P60409 375 aaPredicted RBP3.71□□□□□ -1.82
PAX6-209ENST00000419022 BSNQ9UPA5 3926 aa3.69□□□□□ -1.82
PAX6-209ENST00000419022 MT1HP80294 61 aa3.6□□□□□ -1.83
PAX6-209ENST00000419022 SPRR2EP22531 72 aa3.6□□□□□ -1.83
PAX6-209ENST00000419022 SPRR2BP35325 72 aa3.6□□□□□ -1.83
PAX6-209ENST00000419022 SPRR2AP35326 72 aa3.6□□□□□ -1.83
PAX6-209ENST00000419022 SPRR2GQ9BYE4 73 aa3.58□□□□□ -1.84
PAX6-209ENST00000419022 KRTAP4-1Q9BYQ7 146 aa3.57□□□□□ -1.84
PAX6-209ENST00000419022 DNAH2Q9P225 4427 aa3.56□□□□□ -1.84
PAX6-209ENST00000419022 DNAH10Q8IVF4 4471 aa3.55□□□□□ -1.84
PAX6-209ENST00000419022 DNAH9Q9NYC9 4486 aa3.53□□□□□ -1.84
PAX6-209ENST00000419022 KRTAP19-5Q3LI72 72 aa3.53□□□□□ -1.84
PAX6-209ENST00000419022 DNAH5Q8TE73 4624 aa3.52□□□□□ -1.85
PAX6-209ENST00000419022 MT2AP02795 61 aa3.52□□□□□ -1.85
PAX6-209ENST00000419022 DNAH1Q9P2D7 4330 aa3.52□□□□□ -1.85
PAX6-209ENST00000419022 DNAH11Q96DT5 4516 aa3.51□□□□□ -1.85
PAX6-209ENST00000419022 FRAS1Q86XX4 4008 aa3.51□□□□□ -1.85
PAX6-209ENST00000419022 SPRR2DP22532 72 aa3.48□□□□□ -1.85
PAX6-209ENST00000419022 LCE3CQ5T5A8 94 aa3.48□□□□□ -1.85
PAX6-209ENST00000419022 LCE3BQ5TA77 95 aa3.47□□□□□ -1.85
PAX6-209ENST00000419022 KRTAP19-4Q3LI73 84 aa3.46□□□□□ -1.86
PAX6-209ENST00000419022 DNAH3Q8TD57 4116 aa3.45□□□□□ -1.86
PAX6-209ENST00000419022 MT1FP04733 61 aa3.44□□□□□ -1.86
PAX6-209ENST00000419022 DNAH17Q9UFH2 4485 aa3.43□□□□□ -1.86
PAX6-209ENST00000419022 PLECQ15149 4684 aaKnown RBP3.42□□□□□ -1.86
PAX6-209ENST00000419022 ANK2Q01484 3957 aa3.41□□□□□ -1.86
PAX6-209ENST00000419022 CMYA5Q8N3K9 4069 aa3.39□□□□□ -1.87
PAX6-209ENST00000419022 VPS13DQ5THJ4 4388 aa3.38□□□□□ -1.87
PAX6-209ENST00000419022 LCE2BO14633 110 aa3.38□□□□□ -1.87
PAX6-209ENST00000419022 DNAH8Q96JB1 4490 aa3.38□□□□□ -1.87
PAX6-209ENST00000419022 ZNF469Q96JG9 3925 aaPredicted RBP3.37□□□□□ -1.87
PAX6-209ENST00000419022 FAT1Q14517 4588 aa3.36□□□□□ -1.87
PAX6-209ENST00000419022 DNAH7Q8WXX0 4024 aa3.36□□□□□ -1.87
PAX6-209ENST00000419022 KRTAP12-4P60329 112 aa3.33□□□□□ -1.88
PAX6-209ENST00000419022 SACSQ9NZJ4 4579 aa3.32□□□□□ -1.88
PAX6-209ENST00000419022 MT1GP13640 62 aa3.32□□□□□ -1.88
PAX6-209ENST00000419022 FAT2Q9NYQ8 4349 aa3.3□□□□□ -1.88
PAX6-209ENST00000419022 DYNC2H1Q8NCM8 4307 aaKnown RBP3.3□□□□□ -1.88
PAX6-209ENST00000419022 LRP1BQ9NZR2 4599 aa3.3□□□□□ -1.88
PAX6-209ENST00000419022 KMT2AQ03164 3969 aa3.3□□□□□ -1.88
PAX6-209ENST00000419022 DYNC1H1Q14204 4646 aaKnown RBP3.3□□□□□ -1.88
PAX6-209ENST00000419022 KRTAP19-8Q3LI54 63 aa3.29□□□□□ -1.88
PAX6-209ENST00000419022 DNAH6Q9C0G6 4158 aa3.28□□□□□ -1.88
PAX6-209ENST00000419022 VPS13BQ7Z7G8 4022 aa3.28□□□□□ -1.89
PAX6-209ENST00000419022 KRTAP19-1Q8IUB9 90 aa3.25□□□□□ -1.89
PAX6-209ENST00000419022 PRKDCP78527 4128 aaKnown RBP3.24□□□□□ -1.89
PAX6-209ENST00000419022 LCE2CQ5TA81 110 aa3.24□□□□□ -1.89
PAX6-209ENST00000419022 SPRR5A0A1B0GTR4 108 aa3.23□□□□□ -1.89
PAX6-209ENST00000419022 LYSTQ99698 3801 aa3.23□□□□□ -1.89
PAX6-209ENST00000419022 MT1XP80297 61 aa3.21□□□□□ -1.9
PAX6-209ENST00000419022 STARD9Q9P2P6 4700 aa3.21□□□□□ -1.9
PAX6-209ENST00000419022 LCE2DQ5TA82 110 aaPredicted RBP3.2□□□□□ -1.9
PAX6-209ENST00000419022 APOBP04114 4563 aaKnown RBP3.2□□□□□ -1.9
PAX6-209ENST00000419022 RYR1P21817 5038 aa3.15□□□□□ -1.9
PAX6-209ENST00000419022 MT1BP07438 61 aa3.14□□□□□ -1.91
PAX6-209ENST00000419022 LRP1Q07954 4544 aaKnown RBP3.14□□□□□ -1.91
PAX6-209ENST00000419022 MT4P47944 62 aa3.14□□□□□ -1.91
PAX6-209ENST00000419022 KRTAP4-8A0A0G2JLE6 195 aa3.11□□□□□ -1.91
PAX6-209ENST00000419022 KRTAP4-8Q9BYQ9 185 aa3.11□□□□□ -1.91
PAX6-209ENST00000419022 KRTAP17-1Q9BYP8 105 aa3.09□□□□□ -1.91
PAX6-209ENST00000419022 DNHD1Q96M86 4753 aa3.09□□□□□ -1.91
PAX6-209ENST00000419022 FAT3Q8TDW7 4589 aa3.09□□□□□ -1.91
PAX6-209ENST00000419022 KRTAP9-8Q9BYQ0 159 aa3.09□□□□□ -1.92
PAX6-209ENST00000419022 LCE3DQ9BYE3 92 aa3.08□□□□□ -1.92
PAX6-209ENST00000419022 LCE3EQ5T5B0 92 aa3.06□□□□□ -1.92
PAX6-209ENST00000419022 HECTD4Q9Y4D8 3996 aa3.03□□□□□ -1.93
PAX6-209ENST00000419022 RYR3Q15413 4870 aa3.03□□□□□ -1.93
PAX6-209ENST00000419022 KRTAP9-3Q9BYQ3 159 aa3.02□□□□□ -1.93
PAX6-209ENST00000419022 LCE1BQ5T7P3 118 aa3.02□□□□□ -1.93
PAX6-209ENST00000419022 KRTAP9-2Q9BYQ4 174 aa3.01□□□□□ -1.93
PAX6-209ENST00000419022 HSPG2P98160 4391 aa3□□□□□ -1.93
PAX6-209ENST00000419022 PKD1P98161 4303 aa2.99□□□□□ -1.93
PAX6-209ENST00000419022 HERC1Q15751 4861 aa2.99□□□□□ -1.93
PAX6-209ENST00000419022 MYCBP2O75592 4640 aa2.97□□□□□ -1.93
PAX6-209ENST00000419022 KRTAP4-7Q9BYR0 210 aa2.97□□□□□ -1.93
PAX6-209ENST00000419022 LCE1DQ5T752 114 aa2.96□□□□□ -1.94
PAX6-209ENST00000419022 MT1LQ93083 61 aa2.95□□□□□ -1.94
PAX6-209ENST00000419022 KRTAP19-3Q7Z4W3 81 aa2.95□□□□□ -1.94
PAX6-209ENST00000419022 KRTAP9-6A0A140TA67 174 aa2.95□□□□□ -1.94
PAX6-209ENST00000419022 RYR2Q92736 4967 aa2.94□□□□□ -1.94
PAX6-209ENST00000419022 LPAP08519 4548 aa2.93□□□□□ -1.94
PAX6-209ENST00000419022 PRM1P04553 51 aa2.92□□□□□ -1.94
PAX6-209ENST00000419022 KRTAP20-1Q3LI63 56 aa2.91□□□□□ -1.94
PAX6-209ENST00000419022 PKHD1L1Q86WI1 4243 aa2.9□□□□□ -1.95
PAX6-209ENST00000419022 MT1EP04732 61 aa2.9□□□□□ -1.95
PAX6-209ENST00000419022 LOC100996750A0A140TA64 210 aa2.89□□□□□ -1.95
PAX6-209ENST00000419022 MT3P25713 68 aa2.86□□□□□ -1.95
PAX6-209ENST00000419022 FLGP20930 4061 aaPredicted RBP2.86□□□□□ -1.95
PAX6-209ENST00000419022 LCE5AQ5TCM9 118 aa2.85□□□□□ -1.95
PAX6-209ENST00000419022 TNXBP22105 4242 aa2.85□□□□□ -1.95
PAX6-209ENST00000419022 KIAA1109Q2LD37 5005 aa2.82□□□□□ -1.96
PAX6-209ENST00000419022 KRTAP19-2Q3LHN2 52 aa2.82□□□□□ -1.96
PAX6-209ENST00000419022 MT1MQ8N339 61 aa2.81□□□□□ -1.96
PAX6-209ENST00000419022 KRTAP4-3Q9BYR4 195 aa2.81□□□□□ -1.96
PAX6-209ENST00000419022 KRTAP19-6Q3LI70 58 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms