RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 NBEAL2Q6ZNJ1 2754 aa1.42□□□□□ -2.18
VPS41-206ENST00000418457 HUWE1Q7Z6Z7 4374 aaKnown RBP1.42□□□□□ -2.18
VPS41-206ENST00000418457 HYDINQ4G0P3 5121 aa1.42□□□□□ -2.18
VPS41-206ENST00000418457 VWFP04275 2813 aa1.42□□□□□ -2.18
VPS41-206ENST00000418457 LYSTQ99698 3801 aa1.42□□□□□ -2.18
VPS41-206ENST00000418457 KRTAP13-2Q52LG2 175 aa1.41□□□□□ -2.18
VPS41-206ENST00000418457 SSBP3-AS1Q7Z2R9 100 aa1.41□□□□□ -2.18
VPS41-206ENST00000418457 SPACA4Q8TDM5 124 aa1.41□□□□□ -2.18
VPS41-206ENST00000418457 DNAH7Q8WXX0 4024 aa1.41□□□□□ -2.18
VPS41-206ENST00000418457 NBDYA0A0U1RRE5 68 aa1.4□□□□□ -2.19
VPS41-206ENST00000418457 NUPR2A6NF83 97 aa1.4□□□□□ -2.19
VPS41-206ENST00000418457 MIR22HGQ0VDD5 57 aa1.4□□□□□ -2.19
VPS41-206ENST00000418457 APLNQ9ULZ1 77 aa1.4□□□□□ -2.19
VPS41-206ENST00000418457 DNAH10Q8IVF4 4471 aa1.4□□□□□ -2.19
VPS41-206ENST00000418457 STARD9Q9P2P6 4700 aa1.4□□□□□ -2.19
VPS41-206ENST00000418457 DNAH17Q9UFH2 4485 aa1.39□□□□□ -2.19
VPS41-206ENST00000418457 HERC2O95714 4834 aa1.39□□□□□ -2.19
VPS41-206ENST00000418457 COL7A1Q02388 2944 aa1.39□□□□□ -2.19
VPS41-206ENST00000418457 LCE1CQ5T751 118 aa1.39□□□□□ -2.19
VPS41-206ENST00000418457 LCE1BQ5T7P3 118 aa1.39□□□□□ -2.19
VPS41-206ENST00000418457 CIRBP-AS1Q8TBR5 109 aa1.39□□□□□ -2.19
VPS41-206ENST00000418457 PSORS1C2Q9UIG4 136 aa1.39□□□□□ -2.19
VPS41-206ENST00000418457 PCLOQ9Y6V0 5065 aa1.39□□□□□ -2.19
VPS41-206ENST00000418457 DNAH8Q96JB1 4490 aa1.38□□□□□ -2.19
VPS41-206ENST00000418457 K7EIL1 84 aa1.38□□□□□ -2.19
VPS41-206ENST00000418457 IGLV7-43P04211 117 aa1.38□□□□□ -2.19
VPS41-206ENST00000418457 PLECQ15149 4684 aaKnown RBP1.38□□□□□ -2.19
VPS41-206ENST00000418457 SPINK6Q6UWN8 80 aa1.38□□□□□ -2.19
VPS41-206ENST00000418457 Q6ZRN7 208 aaPredicted RBP1.38□□□□□ -2.19
VPS41-206ENST00000418457 CSMD3Q7Z407 3707 aa1.38□□□□□ -2.19
VPS41-206ENST00000418457 TENM2Q9NT68 2774 aa1.38□□□□□ -2.19
VPS41-206ENST00000418457 VPS13DQ5THJ4 4388 aa1.37□□□□□ -2.19
VPS41-206ENST00000418457 A0A087WTM6 91 aa1.37□□□□□ -2.19
VPS41-206ENST00000418457 A8MUU9 505 aa1.37□□□□□ -2.19
VPS41-206ENST00000418457 LY6G6CO95867 125 aa1.37□□□□□ -2.19
VPS41-206ENST00000418457 HECTD4Q9Y4D8 3996 aa1.37□□□□□ -2.19
VPS41-206ENST00000418457 FRAS1Q86XX4 4008 aa1.37□□□□□ -2.19
VPS41-206ENST00000418457 MGAM2Q2M2H8 2515 aa1.37□□□□□ -2.19
VPS41-206ENST00000418457 DNAH6Q9C0G6 4158 aa1.37□□□□□ -2.19
VPS41-206ENST00000418457 TENM3Q9P273 2699 aa1.36□□□□□ -2.19
VPS41-206ENST00000418457 DNAH2Q9P225 4427 aa1.35□□□□□ -2.19
VPS41-206ENST00000418457 K7ERS5 55 aa1.35□□□□□ -2.19
VPS41-206ENST00000418457 RPS29P62273 56 aaKnown RBP1.35□□□□□ -2.19
VPS41-206ENST00000418457 CSAG1Q6PB30 78 aa1.35□□□□□ -2.19
VPS41-206ENST00000418457 ADM2Q7Z4H4 148 aa1.35□□□□□ -2.19
VPS41-206ENST00000418457 SPINK1P00995 79 aa1.34□□□□□ -2.19
VPS41-206ENST00000418457 KRTAP25-1Q3LHN0 102 aa1.34□□□□□ -2.19
VPS41-206ENST00000418457 ABCA13Q86UQ4 5058 aa1.34□□□□□ -2.2
VPS41-206ENST00000418457 FAT2Q9NYQ8 4349 aa1.34□□□□□ -2.2
VPS41-206ENST00000418457 RYR1P21817 5038 aa1.33□□□□□ -2.2
VPS41-206ENST00000418457 DYNC1H1Q14204 4646 aaKnown RBP1.33□□□□□ -2.2
VPS41-206ENST00000418457 NOTCH1P46531 2555 aa1.33□□□□□ -2.2
VPS41-206ENST00000418457 DNAH5Q8TE73 4624 aa1.33□□□□□ -2.2
VPS41-206ENST00000418457 A0A1B0GU33 70 aa1.33□□□□□ -2.2
VPS41-206ENST00000418457 C1orf134Q5TEV5 83 aa1.33□□□□□ -2.2
VPS41-206ENST00000418457 KIAA1109Q2LD37 5005 aa1.32□□□□□ -2.2
VPS41-206ENST00000418457 DNAH11Q96DT5 4516 aa1.32□□□□□ -2.2
VPS41-206ENST00000418457 ROMO1P60602 79 aa1.32□□□□□ -2.2
VPS41-206ENST00000418457 H1FX-AS1Q4G0G2 97 aa1.32□□□□□ -2.2
VPS41-206ENST00000418457 SPINT4Q6UDR6 99 aa1.32□□□□□ -2.2
VPS41-206ENST00000418457 LINC00304Q8N9R0 145 aa1.32□□□□□ -2.2
VPS41-206ENST00000418457 H0YAA0 97 aa1.31□□□□□ -2.2
VPS41-206ENST00000418457 LUZP6Q538Z0 58 aa1.31□□□□□ -2.2
VPS41-206ENST00000418457 Q6ZSA8 131 aa1.31□□□□□ -2.2
VPS41-206ENST00000418457 KMT2AQ03164 3969 aa1.31□□□□□ -2.2
VPS41-206ENST00000418457 PKHD1P08F94 4074 aa1.31□□□□□ -2.2
VPS41-206ENST00000418457 HSPG2P98160 4391 aa1.31□□□□□ -2.2
VPS41-206ENST00000418457 SRRM2Q9UQ35 2752 aaKnown RBP1.3□□□□□ -2.2
VPS41-206ENST00000418457 PKD1P98161 4303 aa1.3□□□□□ -2.2
VPS41-206ENST00000418457 COX6B2Q6YFQ2 88 aa1.3□□□□□ -2.2
VPS41-206ENST00000418457 C20orf166-AS1Q96NR2 134 aa1.3□□□□□ -2.2
VPS41-206ENST00000418457 HERC1Q15751 4861 aa1.3□□□□□ -2.2
VPS41-206ENST00000418457 STAB2Q8WWQ8 2551 aa1.3□□□□□ -2.2
VPS41-206ENST00000418457 APOBP04114 4563 aaKnown RBP1.29□□□□□ -2.2
VPS41-206ENST00000418457 PKHD1L1Q86WI1 4243 aa1.29□□□□□ -2.2
VPS41-206ENST00000418457 RPL37P61927 97 aaKnown RBP1.28□□□□□ -2.2
VPS41-206ENST00000418457 LRP1BQ9NZR2 4599 aa1.27□□□□□ -2.21
VPS41-206ENST00000418457 MYCBP2O75592 4640 aa1.26□□□□□ -2.21
VPS41-206ENST00000418457 KRTAP5-2Q701N4 177 aa1.26□□□□□ -2.21
VPS41-206ENST00000418457 UBR4Q5T4S7 5183 aa1.25□□□□□ -2.21
VPS41-206ENST00000418457 VPS13BQ7Z7G8 4022 aa1.25□□□□□ -2.21
VPS41-206ENST00000418457 CRIPTQ9P021 101 aa1.25□□□□□ -2.21
VPS41-206ENST00000418457 FAT1Q14517 4588 aa1.25□□□□□ -2.21
VPS41-206ENST00000418457 P0C880 135 aa1.24□□□□□ -2.21
VPS41-206ENST00000418457 HMCN2Q8NDA2 5059 aa1.24□□□□□ -2.21
VPS41-206ENST00000418457 FAT3Q8TDW7 4589 aa1.23□□□□□ -2.21
VPS41-206ENST00000418457 C9orf92A6NGG3 77 aa1.23□□□□□ -2.21
VPS41-206ENST00000418457 S4R3F8 94 aa1.23□□□□□ -2.21
VPS41-206ENST00000418457 M0QZ58 72 aa1.22□□□□□ -2.21
VPS41-206ENST00000418457 TPRXLQ17RH7 258 aa1.22□□□□□ -2.21
VPS41-206ENST00000418457 TNXBP22105 4242 aa1.22□□□□□ -2.21
VPS41-206ENST00000418457 LRP1Q07954 4544 aaKnown RBP1.2□□□□□ -2.22
VPS41-206ENST00000418457 A0A0D9SG42 100 aa1.2□□□□□ -2.22
VPS41-206ENST00000418457 KRTAP13-4Q3LI77 160 aa1.2□□□□□ -2.22
VPS41-206ENST00000418457 KRTAP10-4P60372 401 aaPredicted RBP1.19□□□□□ -2.22
VPS41-206ENST00000418457 KRTAP12-1P59990 96 aa1.18□□□□□ -2.22
VPS41-206ENST00000418457 C10orf95Q9H7T3 257 aa1.18□□□□□ -2.22
VPS41-206ENST00000418457 R4GN34 69 aa1.18□□□□□ -2.22
VPS41-206ENST00000418457 FLG2Q5D862 2391 aaPredicted RBP1.18□□□□□ -2.22
VPS41-206ENST00000418457 SMR3BP02814 79 aaPredicted RBP1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms