RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 KRTAP21-3Q3LHN1 58 aa3.41□□□□□ -1.86
CCNT1-202ENST00000417344 LUZP6Q538Z0 58 aa3.41□□□□□ -1.86
CCNT1-202ENST00000417344 DNAH7Q8WXX0 4024 aa3.41□□□□□ -1.86
CCNT1-202ENST00000417344 KRTAP13-2Q52LG2 175 aa3.41□□□□□ -1.86
CCNT1-202ENST00000417344 VPS13DQ5THJ4 4388 aa3.41□□□□□ -1.86
CCNT1-202ENST00000417344 KRTAP24-1Q3LI83 254 aa3.39□□□□□ -1.87
CCNT1-202ENST00000417344 ITPR2Q14571 2701 aa3.39□□□□□ -1.87
CCNT1-202ENST00000417344 TGP01266 2768 aa3.39□□□□□ -1.87
CCNT1-202ENST00000417344 FBN3Q75N90 2809 aa3.38□□□□□ -1.87
CCNT1-202ENST00000417344 HECTD4Q9Y4D8 3996 aa3.38□□□□□ -1.87
CCNT1-202ENST00000417344 NOTCH1P46531 2555 aa3.38□□□□□ -1.87
CCNT1-202ENST00000417344 A0A0D9SG42 100 aa3.37□□□□□ -1.87
CCNT1-202ENST00000417344 LCE1AQ5T7P2 110 aa3.37□□□□□ -1.87
CCNT1-202ENST00000417344 KMT2AQ03164 3969 aa3.37□□□□□ -1.87
CCNT1-202ENST00000417344 KRTAP13-4Q3LI77 160 aa3.36□□□□□ -1.87
CCNT1-202ENST00000417344 PLECQ15149 4684 aaKnown RBP3.35□□□□□ -1.87
CCNT1-202ENST00000417344 NSD1Q96L73 2696 aaPredicted RBP3.35□□□□□ -1.87
CCNT1-202ENST00000417344 DYNC2H1Q8NCM8 4307 aaKnown RBP3.34□□□□□ -1.87
CCNT1-202ENST00000417344 KRTAP10-6P60371 365 aaPredicted RBP3.34□□□□□ -1.88
CCNT1-202ENST00000417344 S4R3F8 94 aa3.32□□□□□ -1.88
CCNT1-202ENST00000417344 STAB2Q8WWQ8 2551 aa3.31□□□□□ -1.88
CCNT1-202ENST00000417344 COL6A5A8TX70 2615 aa3.31□□□□□ -1.88
CCNT1-202ENST00000417344 DNAH11Q96DT5 4516 aa3.3□□□□□ -1.88
CCNT1-202ENST00000417344 KRTAP1-4P0C5Y4 121 aa3.3□□□□□ -1.88
CCNT1-202ENST00000417344 DNHD1Q96M86 4753 aa3.29□□□□□ -1.88
CCNT1-202ENST00000417344 KRTAP12-2P59991 146 aa3.29□□□□□ -1.88
CCNT1-202ENST00000417344 DNAH2Q9P225 4427 aa3.28□□□□□ -1.88
CCNT1-202ENST00000417344 PRKDCP78527 4128 aaKnown RBP3.26□□□□□ -1.89
CCNT1-202ENST00000417344 C9orf92A6NGG3 77 aa3.26□□□□□ -1.89
CCNT1-202ENST00000417344 RPS29P62273 56 aaKnown RBP3.24□□□□□ -1.89
CCNT1-202ENST00000417344 DNAH6Q9C0G6 4158 aa3.23□□□□□ -1.89
CCNT1-202ENST00000417344 KRTAP12-1P59990 96 aa3.23□□□□□ -1.89
CCNT1-202ENST00000417344 LRP1BQ9NZR2 4599 aa3.23□□□□□ -1.89
CCNT1-202ENST00000417344 MT3P25713 68 aa3.22□□□□□ -1.89
CCNT1-202ENST00000417344 PLAC4Q8WY50 150 aa3.22□□□□□ -1.89
CCNT1-202ENST00000417344 STARD9Q9P2P6 4700 aa3.22□□□□□ -1.89
CCNT1-202ENST00000417344 DNAH5Q8TE73 4624 aa3.22□□□□□ -1.89
CCNT1-202ENST00000417344 STAB1Q9NY15 2570 aa3.2□□□□□ -1.9
CCNT1-202ENST00000417344 DMBT1Q9UGM3 2413 aaPredicted RBP3.2□□□□□ -1.9
CCNT1-202ENST00000417344 VPS13BQ7Z7G8 4022 aa3.17□□□□□ -1.9
CCNT1-202ENST00000417344 MGAM2Q2M2H8 2515 aa3.15□□□□□ -1.9
CCNT1-202ENST00000417344 KRTAP10-1P60331 282 aa3.14□□□□□ -1.91
CCNT1-202ENST00000417344 M0QZ58 72 aa3.12□□□□□ -1.91
CCNT1-202ENST00000417344 MYCBP2O75592 4640 aa3.11□□□□□ -1.91
CCNT1-202ENST00000417344 SACSQ9NZJ4 4579 aa3.1□□□□□ -1.91
CCNT1-202ENST00000417344 KRTAP2-2Q9BYT5 123 aa3.1□□□□□ -1.91
CCNT1-202ENST00000417344 FAT2Q9NYQ8 4349 aa3.09□□□□□ -1.91
CCNT1-202ENST00000417344 KRTAP10-8P60410 259 aa3.09□□□□□ -1.92
CCNT1-202ENST00000417344 APOBP04114 4563 aaKnown RBP3.07□□□□□ -1.92
CCNT1-202ENST00000417344 PKHD1L1Q86WI1 4243 aa3.06□□□□□ -1.92
CCNT1-202ENST00000417344 PKD1P98161 4303 aa3.06□□□□□ -1.92
CCNT1-202ENST00000417344 PKHD1P08F94 4074 aa3.06□□□□□ -1.92
CCNT1-202ENST00000417344 CAMK2N1Q7Z7J9 78 aa3.05□□□□□ -1.92
CCNT1-202ENST00000417344 PP632Q6XCG6 107 aa3.03□□□□□ -1.92
CCNT1-202ENST00000417344 LRP1Q07954 4544 aaKnown RBP3.01□□□□□ -1.93
CCNT1-202ENST00000417344 PRO2289Q9P1D8 64 aa2.99□□□□□ -1.93
CCNT1-202ENST00000417344 R4GN34 69 aa2.97□□□□□ -1.93
CCNT1-202ENST00000417344 FAT3Q8TDW7 4589 aa2.97□□□□□ -1.93
CCNT1-202ENST00000417344 SMR3BP02814 79 aaPredicted RBP2.95□□□□□ -1.94
CCNT1-202ENST00000417344 SPRR5A0A1B0GTR4 108 aa2.95□□□□□ -1.94
CCNT1-202ENST00000417344 HSPG2P98160 4391 aa2.95□□□□□ -1.94
CCNT1-202ENST00000417344 DYNC1H1Q14204 4646 aaKnown RBP2.94□□□□□ -1.94
CCNT1-202ENST00000417344 HYDINQ4G0P3 5121 aa2.93□□□□□ -1.94
CCNT1-202ENST00000417344 TNXBP22105 4242 aa2.92□□□□□ -1.94
CCNT1-202ENST00000417344 FAT1Q14517 4588 aa2.92□□□□□ -1.94
CCNT1-202ENST00000417344 KRTAP10-4P60372 401 aaPredicted RBP2.92□□□□□ -1.94
CCNT1-202ENST00000417344 KMT2CQ8NEZ4 4911 aaKnown RBP2.89□□□□□ -1.95
CCNT1-202ENST00000417344 LPAP08519 4548 aa2.88□□□□□ -1.95
CCNT1-202ENST00000417344 INE1O15225 51 aa2.88□□□□□ -1.95
CCNT1-202ENST00000417344 RYR3Q15413 4870 aa2.88□□□□□ -1.95
CCNT1-202ENST00000417344 BIRC6Q9NR09 4857 aa2.84□□□□□ -1.95
CCNT1-202ENST00000417344 HMCN1Q96RW7 5635 aa2.83□□□□□ -1.96
CCNT1-202ENST00000417344 TNP1P09430 55 aa2.8□□□□□ -1.96
CCNT1-202ENST00000417344 EPPK1P58107 5090 aaKnown RBP2.78□□□□□ -1.96
CCNT1-202ENST00000417344 LCE1FQ5T754 118 aa2.78□□□□□ -1.96
CCNT1-202ENST00000417344 LCE1EQ5T753 118 aa2.77□□□□□ -1.97
CCNT1-202ENST00000417344 KRTAP10-7P60409 375 aaPredicted RBP2.76□□□□□ -1.97
CCNT1-202ENST00000417344 A0A1B0GVY2 172 aa2.74□□□□□ -1.97
CCNT1-202ENST00000417344 Q5VSD8 79 aa2.74□□□□□ -1.97
CCNT1-202ENST00000417344 LRP2P98164 4655 aa2.74□□□□□ -1.97
CCNT1-202ENST00000417344 RYR2Q92736 4967 aa2.73□□□□□ -1.97
CCNT1-202ENST00000417344 KRTAP10-12P60413 245 aa2.72□□□□□ -1.97
CCNT1-202ENST00000417344 PCLOQ9Y6V0 5065 aa2.7□□□□□ -1.98
CCNT1-202ENST00000417344 RYR1P21817 5038 aa2.7□□□□□ -1.98
CCNT1-202ENST00000417344 HERC2O95714 4834 aa2.67□□□□□ -1.98
CCNT1-202ENST00000417344 KRTAP10-5P60370 271 aa2.66□□□□□ -1.98
CCNT1-202ENST00000417344 MT1HL1P0DM35 61 aa2.63□□□□□ -1.99
CCNT1-202ENST00000417344 MUC17Q685J3 4493 aa2.63□□□□□ -1.99
CCNT1-202ENST00000417344 LCE3AQ5TA76 89 aa2.61□□□□□ -1.99
CCNT1-202ENST00000417344 KRTAP5-11Q6L8G4 156 aa2.61□□□□□ -1.99
CCNT1-202ENST00000417344 LCE3CQ5T5A8 94 aa2.59□□□□□ -2
CCNT1-202ENST00000417344 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.57□□□□□ -2
CCNT1-202ENST00000417344 KIAA1109Q2LD37 5005 aa2.56□□□□□ -2
CCNT1-202ENST00000417344 KRTAP19-2Q3LHN2 52 aa2.56□□□□□ -2
CCNT1-202ENST00000417344 KRTAP4-1Q9BYQ7 146 aa2.56□□□□□ -2
CCNT1-202ENST00000417344 FLGP20930 4061 aaPredicted RBP2.54□□□□□ -2
CCNT1-202ENST00000417344 ABCA13Q86UQ4 5058 aa2.54□□□□□ -2
CCNT1-202ENST00000417344 KRTAP8-1Q8IUC2 63 aa2.54□□□□□ -2
CCNT1-202ENST00000417344 HERC1Q15751 4861 aa2.52□□□□□ -2.01
CCNT1-202ENST00000417344 KRTAP10-10P60014 251 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms