RNA–Protein interactions for RNA: ENST00000415620.1

LINC00428-201, long intergenic non-protein coding RNA 428, humanhuman

TSL 5 BASIC

Gene LINC00428, Length 227 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00428-201ENST00000415620 ANKRD29Q8N6D5 301 aa0.2□□□□□ -2.38
LINC00428-201ENST00000415620 SMIM26A0A096LP01 95 aa0.19□□□□□ -2.38
LINC00428-201ENST00000415620 FAM240BA0A1B0GVZ2 78 aa0.19□□□□□ -2.38
LINC00428-201ENST00000415620 SSNA1O43805 119 aa0.19□□□□□ -2.38
LINC00428-201ENST00000415620 VAMP3Q15836 100 aa0.19□□□□□ -2.38
LINC00428-201ENST00000415620 LUZP6Q538Z0 58 aa0.19□□□□□ -2.38
LINC00428-201ENST00000415620 SMIM7Q9BQ49 75 aa0.19□□□□□ -2.38
LINC00428-201ENST00000415620 VPS25Q9BRG1 176 aa0.19□□□□□ -2.38
LINC00428-201ENST00000415620 TRGC2P03986 189 aa0.18□□□□□ -2.38
LINC00428-201ENST00000415620 IFITM1P13164 125 aa0.18□□□□□ -2.38
LINC00428-201ENST00000415620 S100A5P33763 92 aa0.18□□□□□ -2.38
LINC00428-201ENST00000415620 C12orf57Q99622 126 aa0.18□□□□□ -2.38
LINC00428-201ENST00000415620 HSPB8Q9UJY1 196 aa0.18□□□□□ -2.38
LINC00428-201ENST00000415620 TNP1P09430 55 aa0.17□□□□□ -2.38
LINC00428-201ENST00000415620 FABP2P12104 132 aa0.17□□□□□ -2.38
LINC00428-201ENST00000415620 ADIRFQ15847 76 aa0.17□□□□□ -2.38
LINC00428-201ENST00000415620 SMCO4Q9NRQ5 59 aa0.17□□□□□ -2.38
LINC00428-201ENST00000415620 ARPC5O15511 151 aa0.16□□□□□ -2.38
LINC00428-201ENST00000415620 TCTE3Q8IZS6 198 aa0.16□□□□□ -2.38
LINC00428-201ENST00000415620 NAA38Q9BRA0 125 aaKnown RBP0.15□□□□□ -2.39
LINC00428-201ENST00000415620 Q9H521 79 aa0.15□□□□□ -2.39
LINC00428-201ENST00000415620 H0Y8G0 127 aa0.14□□□□□ -2.39
LINC00428-201ENST00000415620 LINC00614P0C842 121 aa0.14□□□□□ -2.39
LINC00428-201ENST00000415620 IFI27L1Q96BM0 104 aa0.14□□□□□ -2.39
LINC00428-201ENST00000415620 YPEL4Q96NS1 127 aa0.14□□□□□ -2.39
LINC00428-201ENST00000415620 TTTY13Q9BZ97 58 aa0.14□□□□□ -2.39
LINC00428-201ENST00000415620 CYP4F30PQ9H0H9 118 aa0.14□□□□□ -2.39
LINC00428-201ENST00000415620 H3BQ85 93 aa0.13□□□□□ -2.39
LINC00428-201ENST00000415620 ACYP1P07311 99 aa0.13□□□□□ -2.39
LINC00428-201ENST00000415620 SRP19P09132 144 aaKnown RBP0.13□□□□□ -2.39
LINC00428-201ENST00000415620 CASC2Q6XLA1 102 aa0.13□□□□□ -2.39
LINC00428-201ENST00000415620 PMCHL2Q9BQD1 86 aa0.13□□□□□ -2.39
LINC00428-201ENST00000415620 PLNP26678 52 aa0.12□□□□□ -2.39
LINC00428-201ENST00000415620 BVES-AS1Q5T3Y7 98 aa0.12□□□□□ -2.39
LINC00428-201ENST00000415620 SMLR1H3BR10 107 aa0.11□□□□□ -2.39
LINC00428-201ENST00000415620 SEC61GP60059 68 aa0.11□□□□□ -2.39
LINC00428-201ENST00000415620 IFITM3Q01628 133 aa0.11□□□□□ -2.39
LINC00428-201ENST00000415620 C18orf32Q8TCD1 76 aa0.1□□□□□ -2.39
LINC00428-201ENST00000415620 KANTRA0A1W2PQU2 76 aa0.09□□□□□ -2.4
LINC00428-201ENST00000415620 PCP4L1A6NKN8 68 aa0.09□□□□□ -2.4
LINC00428-201ENST00000415620 DPM2O94777 84 aa0.09□□□□□ -2.4
LINC00428-201ENST00000415620 IGKCP01834 107 aa0.09□□□□□ -2.4
LINC00428-201ENST00000415620 SEC11CQ9BY50 192 aa0.09□□□□□ -2.4
LINC00428-201ENST00000415620 A0A0B4J2C4 111 aa0.08□□□□□ -2.4
LINC00428-201ENST00000415620 COPS9Q8WXC6 57 aa0.08□□□□□ -2.4
LINC00428-201ENST00000415620 SCGB1D4Q6XE38 83 aa0.07□□□□□ -2.4
LINC00428-201ENST00000415620 S100ZQ8WXG8 99 aa0.07□□□□□ -2.4
LINC00428-201ENST00000415620 HIGD1BQ9P298 99 aa0.07□□□□□ -2.4
LINC00428-201ENST00000415620 TRAV22A0A0B4J277 110 aa0.06□□□□□ -2.4
LINC00428-201ENST00000415620 A0A1B0GU33 70 aa0.06□□□□□ -2.4
LINC00428-201ENST00000415620 SNCGO76070 127 aa0.06□□□□□ -2.4
LINC00428-201ENST00000415620 FABP9Q0Z7S8 132 aa0.06□□□□□ -2.4
LINC00428-201ENST00000415620 ORMDL1Q9P0S3 153 aa0.06□□□□□ -2.4
LINC00428-201ENST00000415620 C9JAW5 83 aa0.05□□□□□ -2.4
LINC00428-201ENST00000415620 S100PP25815 95 aa0.05□□□□□ -2.4
LINC00428-201ENST00000415620 NREPQ16612 68 aa0.05□□□□□ -2.4
LINC00428-201ENST00000415620 TRAV7A0A075B6U4 112 aa0.04□□□□□ -2.4
LINC00428-201ENST00000415620 H0YGX0 51 aa0.04□□□□□ -2.4
LINC00428-201ENST00000415620 TMEM256-PLSCR3K7ERE1 68 aa0.04□□□□□ -2.4
LINC00428-201ENST00000415620 LOC101927531A0A1B0GV80 90 aa0.03□□□□□ -2.4
LINC00428-201ENST00000415620 A0A1B0GX51 115 aa0.03□□□□□ -2.4
LINC00428-201ENST00000415620 LEPROTL1O95214 131 aa0.03□□□□□ -2.4
LINC00428-201ENST00000415620 SPATA8Q6RVD6 105 aa0.03□□□□□ -2.4
LINC00428-201ENST00000415620 A6NED7 52 aa0.02□□□□□ -2.41
LINC00428-201ENST00000415620 K7ERS5 55 aa0.02□□□□□ -2.41
LINC00428-201ENST00000415620 PSPHP1O15172 72 aa0.02□□□□□ -2.41
LINC00428-201ENST00000415620 DNAL4O96015 105 aa0.02□□□□□ -2.41
LINC00428-201ENST00000415620 HSBP1O75506 76 aa0.01□□□□□ -2.41
LINC00428-201ENST00000415620 MT-ND4LP03901 98 aa0.01□□□□□ -2.41
LINC00428-201ENST00000415620 BAALC-AS2P0C853 105 aa0.01□□□□□ -2.41
LINC00428-201ENST00000415620 FABP4P15090 132 aa0.01□□□□□ -2.41
LINC00428-201ENST00000415620 CHCHD1Q96BP2 118 aaKnown RBP0.01□□□□□ -2.41
LINC00428-201ENST00000415620 TP53AIP1Q9HCN2 124 aa0.01□□□□□ -2.41
LINC00428-201ENST00000415620 A0A1B0GW54 56 aa0□□□□□ -2.41
LINC00428-201ENST00000415620 LINC00208Q96KT6 92 aa0□□□□□ -2.41
LINC00428-201ENST00000415620 ACYP2P14621 99 aa-0.01□□□□□ -2.41
LINC00428-201ENST00000415620 PSMB2P49721 201 aa-0.01□□□□□ -2.41
LINC00428-201ENST00000415620 RGS21Q2M5E4 152 aa-0.01□□□□□ -2.41
LINC00428-201ENST00000415620 SLC51BQ86UW2 128 aa-0.01□□□□□ -2.41
LINC00428-201ENST00000415620 KRTDAPP60985 99 aa-0.02□□□□□ -2.41
LINC00428-201ENST00000415620 DMAC1Q96GE9 116 aa-0.02□□□□□ -2.41
LINC00428-201ENST00000415620 PEA15Q15121 130 aa-0.03□□□□□ -2.41
LINC00428-201ENST00000415620 C14orf132Q9NPU4 83 aa-0.03□□□□□ -2.41
LINC00428-201ENST00000415620 H0Y9P7 68 aa-0.04□□□□□ -2.42
LINC00428-201ENST00000415620 SYS1-DBNDD2H3BUS1 97 aa-0.04□□□□□ -2.42
LINC00428-201ENST00000415620 LINC01545Q5VT33 79 aa-0.04□□□□□ -2.42
LINC00428-201ENST00000415620 COA5Q86WW8 74 aa-0.04□□□□□ -2.42
LINC00428-201ENST00000415620 SPCS1Q9Y6A9 102 aa-0.04□□□□□ -2.42
LINC00428-201ENST00000415620 S100A2P29034 98 aa-0.06□□□□□ -2.42
LINC00428-201ENST00000415620 ATOH7Q8N100 152 aa-0.06□□□□□ -2.42
LINC00428-201ENST00000415620 SCGB1A1P11684 91 aa-0.07□□□□□ -2.42
LINC00428-201ENST00000415620 PRO0628Q9UI54 55 aa-0.07□□□□□ -2.42
LINC00428-201ENST00000415620 JMJD7-PLA2G4BH0Y9G9 81 aa-0.08□□□□□ -2.42
LINC00428-201ENST00000415620 SPTSSBQ8NFR3 76 aa-0.08□□□□□ -2.42
LINC00428-201ENST00000415620 ATOX1O00244 68 aa-0.09□□□□□ -2.42
LINC00428-201ENST00000415620 PRO1854Q9UHT4 67 aa-0.09□□□□□ -2.42
LINC00428-201ENST00000415620 H7BZZ5 65 aa-0.11□□□□□ -2.43
LINC00428-201ENST00000415620 SCGB1C2P0DMR2 95 aa-0.11□□□□□ -2.43
LINC00428-201ENST00000415620 ANAPC13Q9BS18 74 aa-0.11□□□□□ -2.43
LINC00428-201ENST00000415620 TSTD3H0UI37 97 aa-0.12□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms