RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 ABCC8Q09428 1581 aa-3.44□□□□□ -2.96
RNU4-88P-201ENST00000411220 IQGAP1P46940 1657 aa-3.44□□□□□ -2.96
RNU4-88P-201ENST00000411220 HMGN2P05204 90 aaKnown RBP-3.45□□□□□ -2.96
RNU4-88P-201ENST00000411220 LIN52Q52LA3 116 aa-3.45□□□□□ -2.96
RNU4-88P-201ENST00000411220 TOP2AP11388 1531 aaKnown RBP-3.45□□□□□ -2.96
RNU4-88P-201ENST00000411220 CLTCL1P53675 1640 aa-3.46□□□□□ -2.96
RNU4-88P-201ENST00000411220 CLTCQ00610 1675 aaKnown RBP-3.46□□□□□ -2.96
RNU4-88P-201ENST00000411220 hCG_2014768A0A024R1R8 64 aa-3.47□□□□□ -2.96
RNU4-88P-201ENST00000411220 A0A087WWC5 75 aa-3.47□□□□□ -2.96
RNU4-88P-201ENST00000411220 A0A1W2PPV4 95 aa-3.47□□□□□ -2.96
RNU4-88P-201ENST00000411220 CATR1Q13166 79 aa-3.47□□□□□ -2.96
RNU4-88P-201ENST00000411220 NKIRAS1Q9NYS0 192 aa-3.47□□□□□ -2.96
RNU4-88P-201ENST00000411220 ABCA8O94911 1581 aa-3.47□□□□□ -2.97
RNU4-88P-201ENST00000411220 PVALEFA0A1B0GWK0 134 aa-3.48□□□□□ -2.97
RNU4-88P-201ENST00000411220 PKIAP61925 76 aa-3.48□□□□□ -2.97
RNU4-88P-201ENST00000411220 LINC00523Q86TU6 105 aa-3.48□□□□□ -2.97
RNU4-88P-201ENST00000411220 PAIP2BQ9ULR5 123 aaKnown RBP-3.48□□□□□ -2.97
RNU4-88P-201ENST00000411220 DUOX1Q9NRD9 1551 aa-3.48□□□□□ -2.97
RNU4-88P-201ENST00000411220 PRXQ9BXM0 1461 aa-3.48□□□□□ -2.97
RNU4-88P-201ENST00000411220 PFDN1O60925 122 aa-3.49□□□□□ -2.97
RNU4-88P-201ENST00000411220 S100A1P23297 94 aa-3.49□□□□□ -2.97
RNU4-88P-201ENST00000411220 C9orf16Q9BUW7 83 aa-3.49□□□□□ -2.97
RNU4-88P-201ENST00000411220 MYMXA0A1B0GTQ4 84 aa-3.5□□□□□ -2.97
RNU4-88P-201ENST00000411220 TPM4P67936 248 aa-3.5□□□□□ -2.97
RNU4-88P-201ENST00000411220 MEIG1Q5JSS6 88 aa-3.5□□□□□ -2.97
RNU4-88P-201ENST00000411220 SMIM20Q8N5G0 67 aa-3.5□□□□□ -2.97
RNU4-88P-201ENST00000411220 SPANXCQ9NY87 97 aa-3.5□□□□□ -2.97
RNU4-88P-201ENST00000411220 CEBPZOSA8MTT3 80 aa-3.51□□□□□ -2.97
RNU4-88P-201ENST00000411220 K7EMI3 77 aa-3.51□□□□□ -2.97
RNU4-88P-201ENST00000411220 HSP90AB2PQ58FF8 381 aa-3.51□□□□□ -2.97
RNU4-88P-201ENST00000411220 TSTD1Q8NFU3 115 aa-3.51□□□□□ -2.97
RNU4-88P-201ENST00000411220 S100ZQ8WXG8 99 aa-3.51□□□□□ -2.97
RNU4-88P-201ENST00000411220 UQCRHLA0A096LP55 91 aa-3.52□□□□□ -2.97
RNU4-88P-201ENST00000411220 APOC2P02655 101 aa-3.52□□□□□ -2.97
RNU4-88P-201ENST00000411220 TOMM20LQ6UXN7 152 aa-3.52□□□□□ -2.97
RNU4-88P-201ENST00000411220 KIF27Q86VH2 1401 aa-3.53□□□□□ -2.97
RNU4-88P-201ENST00000411220 LINC00694P0DN24 101 aa-3.53□□□□□ -2.97
RNU4-88P-201ENST00000411220 TMEM35BQ8NCS4 154 aa-3.53□□□□□ -2.97
RNU4-88P-201ENST00000411220 LZICQ8WZA0 190 aa-3.53□□□□□ -2.97
RNU4-88P-201ENST00000411220 CCDC167Q9P0B6 97 aa-3.53□□□□□ -2.97
RNU4-88P-201ENST00000411220 IQGAP3Q86VI3 1631 aa-3.54□□□□□ -2.98
RNU4-88P-201ENST00000411220 ATP6V1E1P36543 226 aa-3.54□□□□□ -2.98
RNU4-88P-201ENST00000411220 PYDC1Q8WXC3 89 aa-3.54□□□□□ -2.98
RNU4-88P-201ENST00000411220 ERICH2A1L162 156 aa-3.55□□□□□ -2.98
RNU4-88P-201ENST00000411220 SMIM11AP58511 58 aa-3.55□□□□□ -2.98
RNU4-88P-201ENST00000411220 ATP5EP2Q5VTU8 51 aa-3.55□□□□□ -2.98
RNU4-88P-201ENST00000411220 SPANXA1Q9NS26 97 aa-3.55□□□□□ -2.98
RNU4-88P-201ENST00000411220 UGGT1Q9NYU2 1555 aa-3.55□□□□□ -2.98
RNU4-88P-201ENST00000411220 J3QR89 54 aa-3.56□□□□□ -2.98
RNU4-88P-201ENST00000411220 NBEAP1P0C6P0 100 aa-3.56□□□□□ -2.98
RNU4-88P-201ENST00000411220 CCDC42Q96M95 316 aa-3.56□□□□□ -2.98
RNU4-88P-201ENST00000411220 ATP6V1DQ9Y5K8 247 aa-3.56□□□□□ -2.98
RNU4-88P-201ENST00000411220 COMMD10Q9Y6G5 202 aa-3.56□□□□□ -2.98
RNU4-88P-201ENST00000411220 ABCA10Q8WWZ4 1543 aa-3.56□□□□□ -2.98
RNU4-88P-201ENST00000411220 A0A087WXM4 84 aa-3.57□□□□□ -2.98
RNU4-88P-201ENST00000411220 K7ERU9 68 aa-3.57□□□□□ -2.98
RNU4-88P-201ENST00000411220 LSM6P62312 80 aaKnown RBP-3.57□□□□□ -2.98
RNU4-88P-201ENST00000411220 PMS2P3Q13401 168 aa-3.57□□□□□ -2.98
RNU4-88P-201ENST00000411220 TSC22D3Q99576 134 aa-3.57□□□□□ -2.98
RNU4-88P-201ENST00000411220 GNG3P63215 75 aa-3.58□□□□□ -2.98
RNU4-88P-201ENST00000411220 ERICH3Q5RHP9 1530 aa-3.59□□□□□ -2.98
RNU4-88P-201ENST00000411220 M0R1W7 72 aa-3.59□□□□□ -2.98
RNU4-88P-201ENST00000411220 YKT6O15498 198 aa-3.59□□□□□ -2.98
RNU4-88P-201ENST00000411220 SMIM13P0DJ93 91 aa-3.59□□□□□ -2.98
RNU4-88P-201ENST00000411220 SPA17Q15506 151 aa-3.59□□□□□ -2.98
RNU4-88P-201ENST00000411220 PFDN5Q99471 154 aa-3.59□□□□□ -2.98
RNU4-88P-201ENST00000411220 AIF1LQ9BQI0 150 aa-3.59□□□□□ -2.98
RNU4-88P-201ENST00000411220 NDUFA2O43678 99 aa-3.6□□□□□ -2.99
RNU4-88P-201ENST00000411220 MORN2Q502X0 79 aa-3.6□□□□□ -2.99
RNU4-88P-201ENST00000411220 NCMAPQ5T1S8 102 aa-3.6□□□□□ -2.99
RNU4-88P-201ENST00000411220 SKA2Q8WVK7 121 aaPredicted RBP-3.61□□□□□ -2.99
RNU4-88P-201ENST00000411220 Q9Y3F1 56 aa-3.61□□□□□ -2.99
RNU4-88P-201ENST00000411220 H0YGX0 51 aa-3.62□□□□□ -2.99
RNU4-88P-201ENST00000411220 GNGT2O14610 69 aa-3.62□□□□□ -2.99
RNU4-88P-201ENST00000411220 S100GP29377 79 aa-3.62□□□□□ -2.99
RNU4-88P-201ENST00000411220 DR1Q01658 176 aa-3.62□□□□□ -2.99
RNU4-88P-201ENST00000411220 LINC00587B1AMM8 73 aa-3.63□□□□□ -2.99
RNU4-88P-201ENST00000411220 STATHP02808 62 aa-3.63□□□□□ -2.99
RNU4-88P-201ENST00000411220 SERF2P84101 59 aa-3.63□□□□□ -2.99
RNU4-88P-201ENST00000411220 COL5A1-AS1Q5SY13 56 aa-3.63□□□□□ -2.99
RNU4-88P-201ENST00000411220 SMIM3Q9BZL3 60 aa-3.63□□□□□ -2.99
RNU4-88P-201ENST00000411220 MROH2BQ7Z745 1585 aa-3.63□□□□□ -2.99
RNU4-88P-201ENST00000411220 UGGT2Q9NYU1 1516 aa-3.64□□□□□ -2.99
RNU4-88P-201ENST00000411220 COX16Q9P0S2 106 aa-3.64□□□□□ -2.99
RNU4-88P-201ENST00000411220 RPP14O95059 124 aaKnown RBP-3.65□□□□□ -2.99
RNU4-88P-201ENST00000411220 CSTAP01040 98 aa-3.65□□□□□ -2.99
RNU4-88P-201ENST00000411220 FAUP35544 74 aaKnown RBP-3.65□□□□□ -2.99
RNU4-88P-201ENST00000411220 TMEM203Q969S6 136 aa-3.65□□□□□ -2.99
RNU4-88P-201ENST00000411220 SIKE1Q9BRV8 207 aa-3.65□□□□□ -2.99
RNU4-88P-201ENST00000411220 S100A9P06702 114 aaKnown RBP-3.66□□□□□ -3
RNU4-88P-201ENST00000411220 STMN1P16949 149 aa-3.66□□□□□ -3
RNU4-88P-201ENST00000411220 LINC00643Q86TS7 51 aa-3.66□□□□□ -3
RNU4-88P-201ENST00000411220 COX14Q96I36 57 aa-3.66□□□□□ -3
RNU4-88P-201ENST00000411220 IGIPA6NJ69 53 aa-3.67□□□□□ -3
RNU4-88P-201ENST00000411220 SNAPC5O75971 98 aa-3.67□□□□□ -3
RNU4-88P-201ENST00000411220 S100A10P60903 97 aa-3.67□□□□□ -3
RNU4-88P-201ENST00000411220 SVBPQ8N300 66 aa-3.67□□□□□ -3
RNU4-88P-201ENST00000411220 PRCDQ00LT1 54 aa-3.68□□□□□ -3
RNU4-88P-201ENST00000411220 ATXN8Q156A1 80 aa-3.68□□□□□ -3
RNU4-88P-201ENST00000411220 FAM9CQ8IZT9 166 aa-3.68□□□□□ -3
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms